Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 5.6e-143 512.7 289 100.0
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 3.1e-56 224.6 223 53.4
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 1.5e-55 222.2 229 51.5
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 2.9e-54 218.0 226 51.8
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 3.7e-54 217.6 230 51.7
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.9e-53 215.3 223 51.6
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 3.2e-53 214.5 223 49.3
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 9.2e-53 213.0 221 49.8
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 6.0e-52 210.3 224 49.6
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 7.8e-52 209.9 230 47.4
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 1.0e-51 209.5 223 49.8
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 1.0e-51 209.5 230 47.4
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 1.7e-51 208.8 226 48.7
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 1.1e-50 206.1 229 48.5
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 3.3e-50 204.5 227 48.5
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 5.6e-50 203.8 220 48.6
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 7.3e-50 203.4 228 47.4
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 9.5e-50 203.0 218 48.6
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 1.5e-47 195.7 203 51.2
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 2.0e-47 195.3 220 48.6
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 2.9e-46 191.4 224 47.3
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 3.7e-46 191.0 229 43.7
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 4.9e-46 190.7 229 45.4
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 3.2e-45 188.0 229 45.0
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 2.7e-44 184.9 217 44.2
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 2.7e-44 184.9 237 43.9
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 2.7e-44 184.9 229 44.1
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 3.5e-44 184.5 236 41.5
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 4.6e-44 184.1 228 43.0
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 4.6e-44 184.1 228 45.6
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 6.0e-44 183.7 230 46.5
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 1.3e-43 182.6 230 45.2
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 2.3e-43 181.8 224 46.4
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 3.0e-43 181.4 231 42.0
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 5.1e-43 180.6 234 44.0
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 8.6e-43 179.9 233 42.1
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 8.6e-43 179.9 219 42.0
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 2.5e-42 178.3 223 45.3
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 3.3e-42 177.9 234 42.3
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 5.6e-42 177.2 223 43.5
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 5.6e-42 177.2 234 42.3
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 9.5e-42 176.4 229 42.8
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 1.2e-41 176.0 225 41.3
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 1.6e-41 175.6 233 43.8
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 2.1e-41 175.3 230 44.3
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 2.8e-41 174.9 228 42.5
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 3.6e-41 174.5 224 43.3
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 3.6e-41 174.5 229 42.4
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 4.7e-41 174.1 223 44.8
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 6.2e-41 173.7 224 45.1
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 1.1e-40 172.9 225 42.7
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 1.8e-40 172.2 228 42.5
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 5.2e-40 170.6 231 43.7
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 1.5e-39 169.1 233 39.1
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 2.6e-39 168.3 228 42.5
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 4.4e-39 167.5 237 40.1
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 9.9e-39 166.4 228 41.2
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 1.7e-38 165.6 219 41.1
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 3.8e-38 164.5 233 42.1
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 3.8e-38 164.5 233 42.1
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 6.4e-38 163.7 229 41.5
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 1.4e-37 162.5 229 40.6
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 7.1e-37 160.2 230 40.4
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 9.2e-37 159.8 231 40.7
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 1.2e-36 159.5 232 39.2
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 2.7e-36 158.3 232 41.4
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 6.0e-36 157.1 238 38.7
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 6.6e-35 153.7 201 43.3
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 2.5e-34 151.8 226 38.9
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 2.1e-33 148.7 176 49.4
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 3.6e-33 147.9 192 42.2
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-32 146.4 228 38.6
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-32 146.4 228 38.6
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 4.0e-32 144.4 233 35.2
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 2.0e-31 142.1 169 45.6
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 1.4e-29 136.0 178 43.3
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 4.2e-29 134.4 188 41.5
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 4.2e-29 134.4 221 37.6
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 6.0e-28 130.6 193 38.3
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 6.0e-28 130.6 124 50.0
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 1.3e-27 129.4 124 50.0
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 8.7e-27 126.7 193 37.3
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 3.3e-26 124.8 196 38.3
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 5.6e-26 124.0 123 48.8
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 1.8e-24 119.0 113 46.9
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 3.1e-24 118.2 99 52.5
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 5.3e-24 117.5 122 45.1
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 9.0e-24 116.7 190 36.8
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 1.4e-21 109.4 174 37.9
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.1e-20 105.5 165 43.0
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 4.6e-20 104.4 153 39.9
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 7.4e-18 97.1 235 32.8
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 9.6e-18 96.7 129 41.9
SEGI_02979 Sequoiadendron giganteum HOM05D007551 ORTHO05D006600 4.0e-16 91.3 224 30.4
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 1.5e-15 89.4 65 60.0
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 1.3e-11 76.3 186 29.6
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 3.0e-11 75.1 98 36.7
MD11G1144200 Malus domestica HOM05D007212 ORTHO05D009094 5.1e-11 74.3 173 32.4
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 6.7e-11 73.9 209 26.8
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 8.7e-11 73.6 182 30.2
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 1.1e-10 73.2 102 41.2
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 1.9e-10 72.4 202 30.7
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 1.9e-10 72.4 209 28.7
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 7.4e-10 70.5 210 29.0
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.8e-09 68.6 219 26.5
Sopen03g037190 Solanum pennellii HOM05D005764 ORTHO05D006600 3.7e-09 68.2 202 30.2
Prupe.6G082100 Prunus persica HOM05D007212 ORTHO05D009094 4.8e-09 67.8 166 31.3
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 4.8e-09 67.8 68 42.6
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 4.8e-09 67.8 202 28.7
Nitab4.5_0000663g0160 Nicotiana tabacum HOM05D005764 ORTHO05D006600 6.2e-09 67.4 202 27.7
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 6.2e-09 67.4 165 32.1
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 8.2e-09 67.0 180 28.9
Solyc03g118280.1 Solanum lycopersicum HOM05D005764 ORTHO05D006600 1.1e-08 66.6 203 29.1
Ah.02g128350 Amaranthus hybridus HOM05D007212 ORTHO05D009094 1.4e-08 66.2 184 27.2
Haze_07107 Corylus avellana HOM05D005764 ORTHO05D006600 1.4e-08 66.2 213 29.1
FAN16G0386 Fragaria x ananassa HOM05D007212 ORTHO05D009094 1.4e-08 66.2 200 31.0
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 1.8e-08 65.9 184 28.3
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 1.8e-08 65.9 202 29.2
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.8e-08 65.9 166 28.3
Cpa.g.sc190.19 Carica papaya HOM05D007212 ORTHO05D009094 2.4e-08 65.5 169 31.4
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 2.4e-08 65.5 183 26.2
Migut.G01143 Erythranthe guttata HOM05D007212 ORTHO05D009094 2.4e-08 65.5 184 28.8
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 2.4e-08 65.5 203 30.0
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 3.1e-08 65.1 184 28.3
AUR62040786 Chenopodium quinoa HOM05D001653 ORTHO05D001751 3.1e-08 65.1 184 28.3
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 3.1e-08 65.1 169 29.0
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 3.1e-08 65.1 166 28.3
Potri.001G236800 Populus trichocarpa HOM05D007212 ORTHO05D009094 3.1e-08 65.1 179 29.6
FvH4_3g35360 Fragaria vesca HOM05D007212 ORTHO05D009094 4.0e-08 64.7 200 30.5
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 4.0e-08 64.7 169 29.0
FAN11G2747 Fragaria x ananassa HOM05D007212 ORTHO05D009094 4.0e-08 64.7 200 30.5
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 4.0e-08 64.7 198 29.3
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 5.3e-08 64.3 179 31.3
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 6.9e-08 63.9 161 30.4
Migut.D02115 Erythranthe guttata HOM05D007212 ORTHO05D009094 6.9e-08 63.9 184 27.7
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 9.0e-08 63.5 217 23.0
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 9.0e-08 63.5 92 38.0
FAN21G3687 Fragaria x ananassa HOM05D007212 ORTHO05D009094 1.5e-07 62.8 166 31.3
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 2.0e-07 62.4 185 27.6
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 2.0e-07 62.4 166 27.7
Sabra16G0142600 Salix brachista HOM05D007212 ORTHO05D009094 3.4e-07 61.6 179 29.1
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 3.4e-07 61.6 174 24.1
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 4.5e-07 61.2 164 27.4
COL.COLO4_18464 Corchorus olitorius HOM05D007212 ORTHO05D009094 4.5e-07 61.2 155 34.2
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 4.5e-07 61.2 70 40.0
ATR0580G451 Amborella trichopoda HOM05D007212 ORTHO05D009094 5.8e-07 60.8 180 29.4
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 5.8e-07 60.8 175 26.9
Lsat_1_v5_gn_9_22380 Lactuca sativa HOM05D007212 ORTHO05D009094 5.8e-07 60.8 176 28.4
Nitab4.5_0008892g0030 Nicotiana tabacum HOM05D005764 ORTHO05D006600 5.8e-07 60.8 202 27.2
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 5.8e-07 60.8 238 25.6
Thecc.09G326300 Theobroma cacao HOM05D007212 ORTHO05D009094 5.8e-07 60.8 155 32.3
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 7.6e-07 60.5 242 26.9
AT1G66345 Arabidopsis thaliana HOM05D007291 ORTHO05D009038 1.0e-06 60.1 191 25.7
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 1.0e-06 60.1 164 27.4
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 1.0e-06 60.1 205 26.8
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 1.0e-06 60.1 171 30.4
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 1.0e-06 60.1 165 27.3
Migut.I00614 Erythranthe guttata HOM05D005764 ORTHO05D006600 1.3e-06 59.7 198 28.3
Phvul.011G168600 Phaseolus vulgaris HOM05D007208 ORTHO05D009090 1.3e-06 59.7 228 27.6
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 2.2e-06 58.9 217 24.9
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 2.9e-06 58.5 167 26.9
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 2.9e-06 58.5 167 26.9
Sp7g19250 Schrenkiella parvula HOM05D007956 ORTHO05D010152 3.8e-06 58.2 190 28.4
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 4.9e-06 57.8 175 25.7
Gorai.003G135500 Gossypium raimondii HOM05D007212 ORTHO05D009094 4.9e-06 57.8 181 28.7
Lalb_Chr02g0154661 Lupinus albus HOM05D007291 ORTHO05D009038 4.9e-06 57.8 196 25.5
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 6.5e-06 57.4 215 24.2
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 6.5e-06 57.4 163 26.4
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 6.5e-06 57.4 205 27.8
Carub.0007s2026 Capsella rubella HOM05D007956 ORTHO05D010152 8.4e-06 57.0 203 27.1
Migut.D01549 Erythranthe guttata HOM05D004824 ORTHO05D003903 8.4e-06 57.0 183 28.4
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 8.4e-06 57.0 189 28.0


User provided reference genes

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