Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g30331_MAGBIO Magnolia biondii HOM05D004248 ORTHO05D004978 9.5e-75 283.5 150 100.0
Hma1.2p1_0079F.1_g041850 Hydrangea macrophylla HOM05D004248 ORTHO05D004978 5.2e-57 224.6 143 83.2
CSS0019025 Camellia sinensis var. sinensis HOM05D004248 ORTHO05D004978 2.6e-56 222.2 143 81.8
Nn4g22932 Nelumbo nucifera HOM05D004248 ORTHO05D004978 3.4e-56 221.9 143 82.5
GSVIVG01033954001 Vitis vinifera HOM05D004248 ORTHO05D004978 5.8e-56 221.1 143 81.1
Oeu052620.1 Olea europaea HOM05D004248 ORTHO05D004978 2.9e-55 218.8 143 81.1
Nitab4.5_0000020g0020 Nicotiana tabacum HOM05D004248 ORTHO05D004978 3.8e-55 218.4 143 79.7
Dinv31757 Davidia involucrata HOM05D004248 ORTHO05D004978 6.4e-55 217.6 144 80.6
Actinidia06045 Actinidia chinensis HOM05D004248 ORTHO05D004978 8.4e-55 217.2 143 79.0
Actinidia37744 Actinidia chinensis HOM05D004248 ORTHO05D004978 8.4e-55 217.2 143 79.0
Cc06_g06540 Coffea canephora HOM05D004248 ORTHO05D004978 8.4e-55 217.2 143 78.3
Dinv05301 Davidia involucrata HOM05D004248 ORTHO05D004978 8.4e-55 217.2 144 79.2
CAN.G574.19 Capsicum annuum HOM05D004248 ORTHO05D004978 5.4e-54 214.5 143 79.0
CiPaw.10G017100 Carya illinoinensis HOM05D004248 ORTHO05D004978 9.2e-54 213.8 137 79.6
CsaV3_3G040150 Cucumis sativus L. HOM05D004248 ORTHO05D004978 1.6e-53 213.0 143 76.9
Cfa020026 Carpinus fangiana HOM05D004248 ORTHO05D004978 2.7e-53 212.2 143 77.6
Haze_20188 Corylus avellana HOM05D004248 ORTHO05D004978 2.7e-53 212.2 138 79.0
DCAR_020706 Daucus carota HOM05D004248 ORTHO05D004978 3.5e-53 211.8 143 78.3
Sabra06G0156800 Salix brachista HOM05D004248 ORTHO05D004978 3.5e-53 211.8 138 79.7
MSTRG.5896 Avicennia marina HOM05D004248 ORTHO05D004978 4.6e-53 211.5 144 76.4
ClCG10G016230 Citrullus lanatus HOM05D004248 ORTHO05D004978 4.6e-53 211.5 143 76.2
Solyc01g007140.3 Solanum lycopersicum HOM05D004248 ORTHO05D004978 4.6e-53 211.5 143 77.6
Sopen01g003120 Solanum pennellii HOM05D004248 ORTHO05D004978 4.6e-53 211.5 143 77.6
Ciclev10011038m.g Citrus clementina HOM05D004248 ORTHO05D004978 7.8e-53 210.7 145 75.2
FAN05G1094 Fragaria x ananassa HOM05D004248 ORTHO05D004978 7.8e-53 210.7 143 76.9
Rhsim03G0064800 Rhododendron simsii HOM05D004248 ORTHO05D004978 7.8e-53 210.7 139 77.0
Eucgr.E01507 Eucalyptus grandis HOM05D004248 ORTHO05D004978 1.0e-52 210.3 143 75.5
Manes.09G044700 Manihot esculenta HOM05D004248 ORTHO05D004978 1.3e-52 209.9 138 76.8
Atru.chr9.697 Acer truncatum HOM05D004248 ORTHO05D004978 1.7e-52 209.5 147 75.5
FAN02G0498 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.7e-52 209.5 143 76.9
CDE05G1117 Ceratophyllum demersum HOM05D004248 ORTHO05D004978 3.0e-52 208.8 142 73.9
Gohir.A09G134400 Gossypium hirsutum HOM05D004248 ORTHO05D004978 3.0e-52 208.8 144 75.7
Thecc.05G104000 Theobroma cacao HOM05D004248 ORTHO05D004978 3.0e-52 208.8 144 75.7
FAN05G4951 Fragaria x ananassa HOM05D004248 ORTHO05D004978 6.6e-52 207.6 143 75.5
FAN14G1070 Fragaria x ananassa HOM05D004248 ORTHO05D004978 6.6e-52 207.6 143 75.5
Nitab4.5_0002858g0080 Nicotiana tabacum HOM05D004248 ORTHO05D004978 6.6e-52 207.6 126 83.3
Hund14947 Selenicereus undatus HOM05D004248 ORTHO05D004978 6.6e-52 207.6 146 75.3
Cfa016679 Carpinus fangiana HOM05D004248 ORTHO05D004978 8.6e-52 207.2 143 75.5
FAN09G3200 Fragaria x ananassa HOM05D004248 ORTHO05D004978 8.6e-52 207.2 143 75.5
Manes.09G045100 Manihot esculenta HOM05D004248 ORTHO05D004978 8.6e-52 207.2 138 76.1
Gohir.D09G130900 Gossypium hirsutum HOM05D004248 ORTHO05D004978 1.1e-51 206.8 144 75.0
Gorai.006G149600 Gossypium raimondii HOM05D004248 ORTHO05D004978 1.1e-51 206.8 144 75.0
Lsat_1_v5_gn_3_1160 Lactuca sativa HOM05D004248 ORTHO05D004978 1.1e-51 206.8 134 76.9
SGA_v2.0_scaffold13G06632 Striga asiatica HOM05D004248 ORTHO05D004978 1.1e-51 206.8 139 76.3
Oeu036626.1 Olea europaea HOM05D004248 ORTHO05D004978 1.9e-51 206.1 143 75.5
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 3.3e-51 205.3 144 73.6
MELO3C009754.2 Cucumis melo HOM05D004248 ORTHO05D004978 3.3e-51 205.3 158 70.3
Potri.011G095700 Populus trichocarpa HOM05D004248 ORTHO05D004978 3.3e-51 205.3 138 77.5
RcHm_v2.0_Chr3g0475871 Rosa chinensis HOM05D004248 ORTHO05D004978 3.3e-51 205.3 138 76.8
Duzib093G0037 Durio zibethinus HOM05D004248 ORTHO05D004978 4.3e-51 204.9 144 74.3
MD10G1053900 Malus domestica HOM05D004248 ORTHO05D004978 4.3e-51 204.9 143 74.8
MD12G1040000 Malus domestica HOM05D004248 ORTHO05D004978 4.3e-51 204.9 143 74.8
QL07p036804 Quercus lobata HOM05D004248 ORTHO05D004978 4.3e-51 204.9 138 76.1
Cpa.g.sc104.34 Carica papaya HOM05D004248 ORTHO05D004978 9.6e-51 203.8 143 74.8
Sc22g0002860 Simmondsia chinensis HOM05D004248 ORTHO05D004978 1.2e-50 203.4 143 74.1
CANSAT01G1742 Cannabis sativa HOM05D004248 ORTHO05D004978 1.6e-50 203.0 143 73.4
HanXRQChr17g0549301 Helianthus annuus HOM05D004248 ORTHO05D004978 2.1e-50 202.6 134 73.9
Potri.001G208900 Populus trichocarpa HOM05D004248 ORTHO05D004978 3.6e-50 201.8 138 76.1
vmacro07476 Vaccinium macrocarpon HOM05D004248 ORTHO05D004978 3.6e-50 201.8 144 75.7
Haze_19699 Corylus avellana HOM05D004248 ORTHO05D004978 4.7e-50 201.4 143 74.8
Migut.J00705 Erythranthe guttata HOM05D004248 ORTHO05D004978 4.7e-50 201.4 140 74.3
Lj1g0019866 Lotus japonicus HOM05D004248 ORTHO05D004978 4.7e-50 201.4 143 72.0
RcHm_v2.0_Chr1g0331061 Rosa chinensis HOM05D004248 ORTHO05D004978 1.1e-49 200.3 138 74.6
Sed0013531 Sechium edule HOM05D004248 ORTHO05D004978 4.0e-49 198.4 143 71.3
THA.LOC104809952 Tarenaya hassleriana HOM05D004248 ORTHO05D004978 5.2e-49 198.0 143 71.3
Glyma.16G099100 Glycine max HOM05D004248 ORTHO05D004978 6.9e-49 197.6 140 68.6
arahy.Tifrunner.gnm1.ann1.ZDQ0NF Arachis hypogaea HOM05D004248 ORTHO05D004978 9.0e-49 197.2 138 71.7
PSO017G5751 Papaver somniferum HOM05D004248 ORTHO05D004978 9.0e-49 197.2 139 73.4
HPP92_005875 Vanilla planifolia HOM05D004248 ORTHO05D004978 1.2e-48 196.8 138 69.6
arahy.Tifrunner.gnm1.ann1.2W33L2 Arachis hypogaea HOM05D004248 ORTHO05D004978 2.0e-48 196.1 143 70.6
EL10Ac5g12964 Beta vulgaris HOM05D004248 ORTHO05D004978 3.4e-48 195.3 138 69.6
Phvul.008G104000 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 3.4e-48 195.3 143 68.5
Aqoxy3G00875 Aquilegia oxysepala HOM05D004248 ORTHO05D004978 4.4e-48 194.9 145 73.8
ECA247G2914 Erigeron canadensis HOM05D004248 ORTHO05D004978 4.4e-48 194.9 134 72.4
Glyma.07G150100 Glycine max HOM05D004248 ORTHO05D004978 5.8e-48 194.5 140 67.9
PSO478G2311 Papaver somniferum HOM05D004248 ORTHO05D004978 7.6e-48 194.1 139 72.7
AL6G16420 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 2.2e-47 192.6 143 69.9
Carub.0006s0524 Capsella rubella HOM05D004248 ORTHO05D004978 2.9e-47 192.2 143 69.2
AUR62030747 Chenopodium quinoa HOM05D004248 ORTHO05D004978 3.8e-47 191.8 138 70.3
Lalb_Chr20g0111391 Lupinus albus HOM05D004248 ORTHO05D004978 3.8e-47 191.8 136 68.4
Medtr7g106190 Medicago truncatula HOM05D004248 ORTHO05D004978 3.8e-47 191.8 143 69.2
AT5G06350 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 2.4e-46 189.1 143 69.2
Psat3g029120 Pisum sativum HOM05D004248 ORTHO05D004978 2.4e-46 189.1 143 67.8
Sp6g36500 Schrenkiella parvula HOM05D004248 ORTHO05D004978 2.4e-46 189.1 143 67.8
TPR.G35565 Trifolium pratense HOM05D004248 ORTHO05D004978 3.2e-46 188.7 146 64.4
VMungo0647G1936 Vigna mungo HOM05D004248 ORTHO05D004978 4.2e-46 188.3 143 65.7
Aa31sc52G180 Aethionema arabicum HOM05D004248 ORTHO05D004978 3.5e-45 185.3 143 68.5
Os04g0466700 Oryza sativa ssp. japonica HOM05D004248 ORTHO05D004978 4.6e-45 184.9 138 65.2
Prupe.7G095000 Prunus persica HOM05D004248 ORTHO05D004978 4.6e-45 184.9 144 69.4
PGR044G2629 Punica granatum HOM05D004248 ORTHO05D004978 4.6e-45 184.9 143 62.9
unitig_8.g3983 Utricularia gibba HOM05D004248 ORTHO05D004978 4.6e-45 184.9 139 68.3
Ca_09055_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 7.8e-45 184.1 144 68.8
AUR62036385 Chenopodium quinoa HOM05D004248 ORTHO05D004978 1.0e-44 183.7 138 68.1
Ca_26380_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 1.7e-44 183.0 144 68.8
Glyma.16G096800 Glycine max HOM05D004248 ORTHO05D004978 1.7e-44 183.0 126 69.8
PGR004G2794 Punica granatum HOM05D004248 ORTHO05D004978 3.9e-44 181.8 143 62.2
Thhalv10012647m.g Eutrema salsugineum HOM05D004248 ORTHO05D004978 1.9e-43 179.5 143 67.8
ATR0684G083 Amborella trichopoda HOM05D004248 ORTHO05D004978 4.3e-43 178.3 143 65.0
HanXRQChr06g0164371 Helianthus annuus HOM05D004248 ORTHO05D004978 2.8e-42 175.6 173 56.1
BcaNung06319 Brassica carinata HOM05D004248 ORTHO05D004978 1.4e-41 173.3 143 65.0
BcaC06g32369 Brassica carinata HOM05D004248 ORTHO05D004978 4.0e-41 171.8 143 64.3
A10p30020 Brassica napus HOM05D004248 ORTHO05D004978 4.0e-41 171.8 143 64.3
BraA10t45042Z Brassica rapa HOM05D004248 ORTHO05D004978 4.0e-41 171.8 143 64.3
C09p70430 Brassica napus HOM05D004248 ORTHO05D004978 5.3e-41 171.4 143 64.3
BolC9t59789H Brassica oleracea HOM05D004248 ORTHO05D004978 5.3e-41 171.4 143 64.3
CARHR207090 Cardamine hirsuta HOM05D004248 ORTHO05D004978 5.8e-40 167.9 143 62.9
HanXRQChr01g0006711 Helianthus annuus HOM05D004248 ORTHO05D004978 4.9e-39 164.9 139 63.3
AT5G27010 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 2.7e-37 159.1 144 59.0
AL6G38940 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 6.0e-37 157.9 143 60.1
AL4G19610 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 3.9e-36 155.2 135 57.0
Peaxi162Scf00586g00027 Petunia axillaris HOM05D004248 ORTHO05D004978 3.3e-35 152.1 92 83.7
Sabra01G0161200 Salix brachista HOM05D004248 ORTHO05D004978 4.8e-34 148.3 147 59.2
BcaB02g11156 Brassica carinata HOM05D004248 ORTHO05D004978 1.1e-33 147.1 137 56.2
Pp3c26_11250 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-32 143.7 137 55.5
Pp3c26_11260 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-32 143.7 137 55.5
FvH4_6g20280 Fragaria vesca HOM05D004248 ORTHO05D004978 2.6e-32 142.5 95 73.7
SHI44568 Sapria himalayana HOM05D004248 ORTHO05D004978 2.2e-31 139.4 100 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4227 Anthoceros agrestis HOM05D004248 ORTHO05D004978 2.9e-31 139.0 129 55.0
BcaB02g11160 Brassica carinata HOM05D004248 ORTHO05D004978 5.1e-28 128.3 124 52.4
AT4G04680 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 2.5e-27 125.9 97 64.9
Cpa.g.c47797 Carica papaya HOM05D004248 ORTHO05D004978 2.5e-27 125.9 86 79.1
Psat5g276400 Pisum sativum HOM05D004248 ORTHO05D004978 4.8e-26 121.7 90 70.0
Cre10.g442250 Chlamydomonas reinhardtii HOM05D004248 ORTHO05D004978 8.2e-26 120.9 131 49.6
Mapoly0023s0084 Marchantia polymorpha HOM05D004248 ORTHO05D004978 5.3e-25 118.2 137 46.7
SEGI_27247 Sequoiadendron giganteum HOM05D004248 ORTHO05D004978 1.9e-22 109.8 110 55.5
MCO15G695 Micromonas commoda HOM05D004248 ORTHO05D004978 1.2e-16 90.5 135 38.5
PRCOL_00003825 Prasinoderma coloniale HOM05D004248 ORTHO05D004978 2.6e-16 89.4 143 35.0
RcHm_v2.0_Chr1g0331091 Rosa chinensis HOM05D004248 ORTHO05D004978 2.2e-15 86.3 58 70.7
SMO114G0040 Selaginella moellendorffii HOM05D004248 ORTHO05D004978 1.7e-10 70.1 144 35.4


User provided reference genes

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