Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 4.0e-34 147.5 74 100.0
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 7.9e-14 80.1 66 69.7
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 2.3e-13 78.6 61 70.5
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 3.0e-13 78.2 63 66.7
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 6.7e-13 77.0 66 66.7
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 6.7e-13 77.0 59 69.5
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 6.7e-13 77.0 59 69.5
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.9e-12 75.5 64 59.4
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 1.9e-12 75.5 61 67.2
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 3.3e-12 74.7 40 87.5
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 3.3e-12 74.7 40 87.5
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 3.3e-12 74.7 52 71.2
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 4.3e-12 74.3 65 60.0
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 7.4e-12 73.6 39 89.7
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 7.4e-12 73.6 66 63.6
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 9.6e-12 73.2 61 62.3
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.3e-11 72.8 69 59.4
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 1.3e-11 72.8 67 62.7
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 1.3e-11 72.8 61 60.7
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 1.6e-11 72.4 63 63.5
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.6e-11 72.4 58 63.8
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 2.1e-11 72.0 39 87.2
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 2.8e-11 71.6 55 63.6
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 2.8e-11 71.6 50 70.0
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 3.7e-11 71.2 60 65.0
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 3.7e-11 71.2 61 65.6
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 3.7e-11 71.2 64 64.1
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 4.8e-11 70.9 56 60.7
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 6.2e-11 70.5 61 65.6
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 6.2e-11 70.5 41 82.9
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 6.2e-11 70.5 56 62.5
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 8.1e-11 70.1 61 57.4
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 8.1e-11 70.1 39 84.6
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 8.1e-11 70.1 39 84.6
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 8.1e-11 70.1 42 78.6
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 1.1e-10 69.7 61 59.0
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 1.1e-10 69.7 39 84.6
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 1.1e-10 69.7 39 84.6
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 1.1e-10 69.7 48 70.8
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 1.4e-10 69.3 70 60.0
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 1.8e-10 68.9 39 82.1
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 1.8e-10 68.9 62 61.3
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 1.8e-10 68.9 65 60.0
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 1.8e-10 68.9 61 59.0
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 2.4e-10 68.6 42 76.2
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 2.4e-10 68.6 40 77.5
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 2.4e-10 68.6 38 84.2
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 2.4e-10 68.6 68 58.8
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 2.4e-10 68.6 66 54.5
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 3.1e-10 68.2 37 86.5
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 3.1e-10 68.2 66 62.1
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 3.1e-10 68.2 55 67.3
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 4.0e-10 67.8 62 64.5
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 4.0e-10 67.8 62 64.5
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 4.0e-10 67.8 62 64.5
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 4.0e-10 67.8 62 59.7
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 4.0e-10 67.8 38 81.6
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 4.0e-10 67.8 67 62.7
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 4.0e-10 67.8 40 80.0
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 6.9e-10 67.0 46 67.4
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 6.9e-10 67.0 53 66.0
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 9.0e-10 66.6 65 56.9
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 9.0e-10 66.6 39 82.1
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 1.2e-09 66.2 71 59.2
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.2e-09 66.2 57 61.4
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.2e-09 66.2 57 61.4
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.2e-09 66.2 65 58.5
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 1.5e-09 65.9 37 83.8
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.5e-09 65.9 39 76.9
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 1.5e-09 65.9 42 81.0
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 2.0e-09 65.5 36 86.1
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 2.0e-09 65.5 36 86.1
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.0e-09 65.5 37 83.8
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.0e-09 65.5 37 83.8
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.0e-09 65.5 37 83.8
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 2.0e-09 65.5 37 83.8
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 2.0e-09 65.5 37 83.8
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 2.6e-09 65.1 62 56.5
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 3.4e-09 64.7 38 81.6
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 3.4e-09 64.7 37 83.8
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 4.5e-09 64.3 42 71.4
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 4.5e-09 64.3 42 71.4
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 5.8e-09 63.9 37 78.4
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 1.0e-08 63.2 37 81.1
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 1.0e-08 63.2 39 74.4
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 1.0e-08 63.2 42 73.8
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 1.0e-08 63.2 58 56.9
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 2.2e-08 62.0 46 71.7
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 3.8e-08 61.2 68 57.4
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 3.8e-08 61.2 38 73.7
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 3.8e-08 61.2 60 58.3
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 8.4e-08 60.1 61 55.7
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 8.4e-08 60.1 39 64.1
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 1.4e-07 59.3 51 62.7
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 2.5e-07 58.5 71 52.1


User provided reference genes

Program Settings