Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g20496_MAGBIO Magnolia biondii HOM05D007276 ORTHO05D009222 4.1e-84 314.7 159 100.0
MBI10_g28011_MAGBIO Magnolia biondii HOM05D002670 ORTHO05D009222 3.8e-82 308.1 157 99.4
TAR374G1515 Trochodendron aralioides HOM05D007276 ORTHO05D009222 9.2e-36 154.1 113 68.1
PSO063G4223 Papaver somniferum HOM05D007276 ORTHO05D009222 3.6e-32 142.1 125 61.6
PSO832G3155 Papaver somniferum HOM05D007276 ORTHO05D009222 3.6e-32 142.1 126 61.1
CANSAT64G2297 Cannabis sativa HOM05D007276 ORTHO05D009222 6.2e-32 141.4 113 62.8
GSVIVG01019955001 Vitis vinifera HOM05D007276 ORTHO05D009222 4.0e-31 138.7 126 61.1
CAN.G1596.1 Capsicum annuum HOM05D007276 ORTHO05D009222 9.9e-30 134.0 111 63.1
COL.COLO4_22938 Corchorus olitorius HOM05D007276 ORTHO05D009222 9.9e-30 134.0 87 74.7
Nitab4.5_0004300g0170 Nicotiana tabacum HOM05D007276 ORTHO05D009222 9.9e-30 134.0 111 60.4
QL03p068197 Quercus lobata HOM05D007276 ORTHO05D009222 9.9e-30 134.0 116 58.6
Peaxi162Scf00222g00618 Petunia axillaris HOM05D007276 ORTHO05D009222 1.3e-29 133.7 134 56.7
Haze_11990 Corylus avellana HOM05D007276 ORTHO05D009222 2.2e-29 132.9 94 70.2
Lj3A1035T52 Lonicera japonica HOM05D007276 ORTHO05D009222 2.2e-29 132.9 106 62.3
Cfa008960 Carpinus fangiana HOM05D007276 ORTHO05D009222 2.9e-29 132.5 88 73.9
Nitab4.5_0000040g0080 Nicotiana tabacum HOM05D007276 ORTHO05D009222 2.9e-29 132.5 111 61.3
Gohir.A13G077100 Gossypium hirsutum HOM05D007276 ORTHO05D009222 3.7e-29 132.1 116 57.8
Gorai.013G087300 Gossypium raimondii HOM05D007276 ORTHO05D009222 3.7e-29 132.1 116 57.8
CDE07G1248 Ceratophyllum demersum HOM05D007276 ORTHO05D009222 6.4e-29 131.3 99 67.7
Lalb_Chr17g0340861 Lupinus albus HOM05D007276 ORTHO05D009222 6.4e-29 131.3 101 63.4
Gohir.D13G076600 Gossypium hirsutum HOM05D007276 ORTHO05D009222 1.1e-28 130.6 116 56.9
MD16G1069900 Malus domestica HOM05D007276 ORTHO05D009222 1.4e-28 130.2 96 66.7
Aqoxy3G00485 Aquilegia oxysepala HOM05D007276 ORTHO05D009222 2.4e-28 129.4 95 66.3
PGSC0003DMG400018434 Solanum tuberosum HOM05D007276 ORTHO05D009222 3.2e-28 129.0 111 59.5
CSS0029134 Camellia sinensis var. sinensis HOM05D007276 ORTHO05D009222 7.1e-28 127.9 84 72.6
Solyc05g007780.3 Solanum lycopersicum HOM05D007276 ORTHO05D009222 9.2e-28 127.5 111 58.6
Thecc.02G343000 Theobroma cacao HOM05D007276 ORTHO05D009222 9.2e-28 127.5 121 57.0
Prupe.1G277200 Prunus persica HOM05D007276 ORTHO05D009222 1.6e-27 126.7 96 63.5
Actinidia31910 Actinidia chinensis HOM05D007276 ORTHO05D009222 2.7e-27 125.9 136 52.9
Lalb_Chr10g0098421 Lupinus albus HOM05D007276 ORTHO05D009222 3.5e-27 125.6 91 65.9
MD13G1069500 Malus domestica HOM05D007276 ORTHO05D009222 4.6e-27 125.2 96 63.5
Sopen05g003640 Solanum pennellii HOM05D007276 ORTHO05D009222 4.6e-27 125.2 111 57.7
vmacro01271 Vaccinium macrocarpon HOM05D007276 ORTHO05D009222 4.6e-27 125.2 101 58.4
DCAR_007169 Daucus carota HOM05D007276 ORTHO05D009222 1.0e-26 124.0 120 55.8
CSS0045447 Camellia sinensis var. sinensis HOM05D007276 ORTHO05D009222 1.3e-26 123.6 80 73.8
FAN07G0275 Fragaria x ananassa HOM05D007276 ORTHO05D009222 1.3e-26 123.6 115 54.8
TWI31G0118 Tripterygium wilfordii HOM05D007276 ORTHO05D009222 1.3e-26 123.6 105 60.0
FAN17G1584 Fragaria x ananassa HOM05D007276 ORTHO05D009222 2.3e-26 122.9 115 53.9
FAN22G2401 Fragaria x ananassa HOM05D007276 ORTHO05D009222 3.9e-26 122.1 115 53.9
FvH4_4g31100 Fragaria vesca HOM05D007276 ORTHO05D009222 5.1e-26 121.7 97 59.8
FAN12G2976 Fragaria x ananassa HOM05D007276 ORTHO05D009222 5.1e-26 121.7 97 59.8
Duzib248G1071 Durio zibethinus HOM05D007276 ORTHO05D009222 6.6e-26 121.3 99 60.6
RcHm_v2.0_Chr4g0439481 Rosa chinensis HOM05D007276 ORTHO05D009222 8.6e-26 120.9 115 53.0
Cpa.g.sc350.6 Carica papaya HOM05D007276 ORTHO05D009222 1.1e-25 120.6 109 60.6
Lsat_1_v5_gn_8_50900 Lactuca sativa HOM05D007276 ORTHO05D009222 1.1e-25 120.6 113 54.0
Rhsim12G0065000 Rhododendron simsii HOM05D007276 ORTHO05D009222 1.1e-25 120.6 86 61.6
ClCG05G000900 Citrullus lanatus HOM05D007276 ORTHO05D009222 1.5e-25 120.2 110 60.9
Glyma.01G050900 Glycine max HOM05D007276 ORTHO05D009222 1.5e-25 120.2 89 65.2
Sp1g12490 Schrenkiella parvula HOM05D007276 ORTHO05D009222 2.5e-25 119.4 87 69.0
Atru.chr11.1756 Acer truncatum HOM05D007276 ORTHO05D009222 3.3e-25 119.0 105 59.0
SalBow8G1336 Salvia bowleyana HOM05D007276 ORTHO05D009222 3.3e-25 119.0 112 54.5
Thhalv10008853m.g Eutrema salsugineum HOM05D007276 ORTHO05D009222 4.3e-25 118.6 86 66.3
Ca_04824_v3 Cicer arietinum L. HOM05D007276 ORTHO05D009222 5.6e-25 118.2 105 58.1
Migut.E00079 Erythranthe guttata HOM05D007276 ORTHO05D009222 5.6e-25 118.2 76 72.4
BcaC07g41598 Brassica carinata HOM05D007276 ORTHO05D009222 7.3e-25 117.9 87 67.8
A09p62430 Brassica napus HOM05D007276 ORTHO05D009222 7.3e-25 117.9 87 67.8
C08p45990 Brassica napus HOM05D007276 ORTHO05D009222 7.3e-25 117.9 87 67.8
BolC8t52150H Brassica oleracea HOM05D007276 ORTHO05D009222 7.3e-25 117.9 87 67.8
BraA09t41607Z Brassica rapa HOM05D007276 ORTHO05D009222 7.3e-25 117.9 87 67.8
PGR119G1244 Punica granatum HOM05D007276 ORTHO05D009222 7.3e-25 117.9 120 51.7
HanXRQChr08g0210761 Helianthus annuus HOM05D007276 ORTHO05D009222 9.6e-25 117.5 92 64.1
Eucgr.G02488 Eucalyptus grandis HOM05D007276 ORTHO05D009222 1.6e-24 116.7 101 60.4
Eucgr.L02948 Eucalyptus grandis HOM05D007276 ORTHO05D009222 1.6e-24 116.7 101 60.4
Psat2g116600 Pisum sativum HOM05D007276 ORTHO05D009222 1.6e-24 116.7 108 55.6
MELO3C006032.2 Cucumis melo HOM05D007276 ORTHO05D009222 2.8e-24 115.9 90 65.6
CARHR014540 Cardamine hirsuta HOM05D007276 ORTHO05D009222 3.6e-24 115.5 86 65.1
AT1G14150 Arabidopsis thaliana HOM05D007276 ORTHO05D009222 6.2e-24 114.8 86 67.4
ECA233G1360 Erigeron canadensis HOM05D007276 ORTHO05D009222 6.2e-24 114.8 117 54.7
Phvul.003G045300 Phaseolus vulgaris HOM05D007276 ORTHO05D009222 6.2e-24 114.8 109 57.8
Medtr5g041910 Medicago truncatula HOM05D007276 ORTHO05D009222 8.1e-24 114.4 87 63.2
BcaC05g25313 Brassica carinata HOM05D007276 ORTHO05D009222 1.4e-23 113.6 113 54.0
BcaB08g34371 Brassica carinata HOM05D007276 ORTHO05D009222 1.8e-23 113.2 117 53.8
A06p10150 Brassica napus HOM05D007276 ORTHO05D009222 1.8e-23 113.2 113 54.0
BolC5t29950H Brassica oleracea HOM05D007276 ORTHO05D009222 1.8e-23 113.2 113 54.0
BraA06t24199Z Brassica rapa HOM05D007276 ORTHO05D009222 1.8e-23 113.2 113 54.0
CiPaw.06G087100 Carya illinoinensis HOM05D007276 ORTHO05D009222 1.8e-23 113.2 75 72.0
Cc11_g12760 Coffea canephora HOM05D007276 ORTHO05D009222 1.8e-23 113.2 96 58.3
Manes.05G104400 Manihot esculenta HOM05D007276 ORTHO05D009222 1.8e-23 113.2 111 56.8
TPR.G34704 Trifolium pratense HOM05D007276 ORTHO05D009222 1.8e-23 113.2 95 56.8
CsaV3_3G008130 Cucumis sativus L. HOM05D007276 ORTHO05D009222 3.1e-23 112.5 91 64.8
THA.LOC104805943 Tarenaya hassleriana HOM05D007276 ORTHO05D009222 3.1e-23 112.5 68 76.5
Aa31LG1G940 Aethionema arabicum HOM05D007276 ORTHO05D009222 6.8e-23 111.3 98 62.2
Dinv16671 Davidia involucrata HOM05D007276 ORTHO05D009222 8.9e-23 110.9 64 76.6
Sed0023794 Sechium edule HOM05D007276 ORTHO05D009222 8.9e-23 110.9 114 51.8
AL1G26020 Arabidopsis lyrata HOM05D007276 ORTHO05D009222 1.2e-22 110.5 86 64.0
Carub.0001s1383 Capsella rubella HOM05D007276 ORTHO05D009222 1.5e-22 110.2 61 83.6
EL10Ac6g13239 Beta vulgaris HOM05D007276 ORTHO05D009222 2.6e-22 109.4 113 56.6
C05p11930 Brassica napus HOM05D007276 ORTHO05D009222 7.6e-22 107.8 113 51.3
arahy.Tifrunner.gnm1.ann1.T46WBJ Arachis hypogaea HOM05D007276 ORTHO05D009222 9.9e-22 107.5 85 63.5
arahy.Tifrunner.gnm1.ann1.WM01M4 Arachis hypogaea HOM05D007276 ORTHO05D009222 9.9e-22 107.5 85 63.5
VMungo0720G2065 Vigna mungo HOM05D007276 ORTHO05D009222 9.9e-22 107.5 114 53.5
Lj2g0006863 Lotus japonicus HOM05D007276 ORTHO05D009222 1.3e-21 107.1 63 74.6
Ah.02g129580 Amaranthus hybridus HOM05D007276 ORTHO05D009222 2.2e-21 106.3 108 53.7
Sabra10G0126700 Salix brachista HOM05D007276 ORTHO05D009222 4.9e-21 105.1 103 54.4
ATR0564G040 Amborella trichopoda HOM05D007276 ORTHO05D009222 8.4e-21 104.4 100 56.0
arahy.Tifrunner.gnm1.ann1.I21UC1 Arachis hypogaea HOM05D007276 ORTHO05D009222 8.4e-21 104.4 65 72.3
Potri.010G166800 Populus trichocarpa HOM05D007276 ORTHO05D009222 3.2e-20 102.4 121 47.9
AUR62005819 Chenopodium quinoa HOM05D007276 ORTHO05D009222 5.4e-20 101.7 85 63.5
Os02g0578400 Oryza sativa ssp. japonica HOM05D007276 ORTHO05D009222 9.3e-20 100.9 59 74.6
Zm00001eb183170 Zea mays HOM05D007276 ORTHO05D009222 7.8e-19 97.8 72 62.5
Zm00001eb244980 Zea mays HOM05D007276 ORTHO05D009222 7.8e-19 97.8 59 72.9
Ciclev10033819m.g Citrus clementina HOM05D007276 ORTHO05D009222 3.3e-17 92.4 97 50.5
Aqoxy1G00315 Aquilegia oxysepala HOM05D007276 ORTHO05D009222 3.6e-16 89.0 92 50.0
BolC5t29943H Brassica oleracea HOM05D007276 ORTHO05D009222 6.2e-16 88.2 98 50.0
unitig_21.g20855 Utricularia gibba HOM05D000077 ORTHO05D005617 8.1e-16 87.8 85 51.8
Duzib268G0683 Durio zibethinus HOM05D007276 ORTHO05D009222 9.9e-14 80.9 110 43.6
AUR62032813 Chenopodium quinoa HOM05D007276 ORTHO05D009222 5.1e-10 68.6 115 41.7


User provided reference genes

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