Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 6.2e-123 444.1 220 100.0
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 5.9e-73 278.1 162 84.6
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 5.9e-41 171.8 180 48.9
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.0e-40 171.0 180 47.2
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.0e-40 171.0 180 47.2
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 2.2e-40 169.9 165 51.5
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 6.5e-40 168.3 175 48.6
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 6.5e-40 168.3 175 48.6
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 2.7e-38 162.9 164 51.2
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 9.8e-36 154.5 167 49.1
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 2.0e-33 146.7 174 43.1
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 2.7e-33 146.4 169 47.3
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 5.0e-32 142.1 174 41.4
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 8.5e-32 141.4 181 42.5
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 1.2e-30 137.5 157 44.6
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 3.6e-30 136.0 165 46.1
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 2.3e-29 133.3 168 42.9
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.2e-28 131.0 180 40.6
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 2.6e-28 129.8 178 39.3
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.3e-27 127.5 180 40.0
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 2.2e-27 126.7 179 39.7
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 2.8e-27 126.3 159 41.5
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 6.3e-27 125.2 179 40.8
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 8.3e-27 124.8 164 44.5
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 1.8e-26 123.6 179 39.1
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 2.4e-26 123.2 177 37.3
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 3.1e-26 122.9 157 40.1
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 4.1e-26 122.5 164 38.4
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 7.0e-26 121.7 157 38.2
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 1.3e-24 117.5 150 40.0
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 2.3e-24 116.7 186 37.6
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 3.3e-23 112.8 177 39.0
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 1.2e-22 110.9 151 37.7
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 4.0e-21 105.9 165 38.8
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 1.2e-20 104.4 186 34.4
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 1.7e-19 100.5 186 33.9
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 8.3e-19 98.2 179 35.8
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 1.8e-18 97.1 178 35.4
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 4.1e-18 95.9 154 35.7
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 1.2e-17 94.4 159 35.2
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 7.8e-17 91.7 150 33.3
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 8.6e-16 88.2 178 29.8
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 3.3e-15 86.3 150 32.7
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 5.6e-15 85.5 127 40.2
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 7.3e-15 85.1 188 32.4
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 9.5e-15 84.7 150 32.0
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 1.0e-13 81.3 184 31.0
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 2.0e-09 67.0 151 29.1
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 6.0e-09 65.5 101 40.6
AT5G55840 Arabidopsis thaliana HOM05D007390 ORTHO05D009114 1.1e-07 61.2 127 30.7
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 1.1e-07 61.2 114 31.6
CAN.G113.7 Capsicum annuum HOM05D007455 ORTHO05D009431 1.9e-07 60.5 114 31.6
Sopen04g025650 Solanum pennellii HOM05D007455 ORTHO05D009431 3.3e-07 59.7 114 31.6
Actinidia16375 Actinidia chinensis HOM05D007455 ORTHO05D009431 5.6e-07 58.9 104 34.6
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 5.6e-07 58.9 178 23.6
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 7.3e-07 58.5 156 23.7
PGSC0003DMG400001336 Solanum tuberosum HOM05D007455 ORTHO05D009431 7.3e-07 58.5 114 30.7
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 1.6e-06 57.4 128 27.3
AL8G31410 Arabidopsis lyrata HOM05D007390 ORTHO05D009114 2.8e-06 56.6 127 29.1
CsaV3_1G043280 Cucumis sativus L. HOM05D007455 ORTHO05D009431 3.6e-06 56.2 105 29.5
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 3.6e-06 56.2 121 23.1
GSVIVG01012774001 Vitis vinifera HOM05D007390 ORTHO05D009114 4.7e-06 55.8 104 30.8
Carub.0008s1619 Capsella rubella HOM05D007390 ORTHO05D009114 8.1e-06 55.1 87 36.8
MELO3C015131.2 Cucumis melo HOM05D007455 ORTHO05D009431 8.1e-06 55.1 91 33.0


User provided reference genes

Program Settings