Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.1e-65 250.4 120 100.0
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.3e-55 219.5 114 93.0
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 2.5e-17 92.4 119 46.2
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 6.8e-15 84.3 115 44.3
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.3e-13 80.1 114 37.7
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.7e-13 78.6 74 51.4
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 6.3e-13 77.8 141 35.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 3.1e-12 75.5 141 34.8
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 3.1e-12 75.5 69 60.9
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 5.4e-12 74.7 69 56.5
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 9.1e-12 73.9 110 48.2
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 7.7e-11 70.9 75 50.7
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-10 70.1 73 50.7
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-10 70.1 73 50.7
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.3e-10 69.3 127 38.6
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 2.3e-10 69.3 66 57.6
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 2.3e-10 69.3 66 57.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.9e-10 68.9 66 57.6
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 8.6e-10 67.4 67 52.2
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 8.6e-10 67.4 66 56.1
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.1e-09 67.0 66 54.5
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.5e-09 66.6 117 38.5
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.5e-09 66.6 69 56.5
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.9e-09 66.2 66 51.5
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 3.3e-09 65.5 71 49.3
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 4.2e-09 65.1 65 49.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 4.2e-09 65.1 66 51.5
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 5.5e-09 64.7 57 57.9
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 5.5e-09 64.7 72 50.0
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 9.5e-09 63.9 66 53.0
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.2e-08 63.5 66 54.5
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 1.6e-08 63.2 113 38.1
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.6e-08 63.2 66 53.0
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 2.1e-08 62.8 66 54.5
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 3.6e-08 62.0 69 47.8
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 6.1e-08 61.2 68 45.6
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 6.1e-08 61.2 66 51.5
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.4e-07 60.1 67 44.8
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.8e-07 59.7 79 40.5
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 3.0e-07 58.9 79 40.5
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 3.0e-07 58.9 67 46.3
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 4.0e-07 58.5 68 45.6
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 5.2e-07 58.2 74 45.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 5.2e-07 58.2 68 47.1
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 6.8e-07 57.8 70 48.6
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 8.9e-07 57.4 67 43.3
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.2e-06 57.0 69 47.8
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.2e-06 57.0 70 50.0
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.2e-06 57.0 125 33.6
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.5e-06 56.6 64 48.4
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.6e-06 55.8 66 40.9
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.4e-06 55.5 71 47.9
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 3.4e-06 55.5 68 44.1
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 7.5e-06 54.3 68 45.6


User provided reference genes

Program Settings