Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g05162_MAGBIO Magnolia biondii HOM05D004603 ORTHO05D005244 1.5e-118 429.5 216 100.0
TAR053G0004 Trochodendron aralioides HOM05D004603 ORTHO05D005244 2.8e-35 152.9 183 48.6
MBI13_g05166_MAGBIO Magnolia biondii HOM05D004603 ORTHO05D005244 2.0e-33 146.7 142 59.9
TAR369G0595 Trochodendron aralioides HOM05D004603 ORTHO05D005244 1.1e-28 131.0 186 41.9
Potri.001G024000 Populus trichocarpa HOM05D004603 ORTHO05D005244 9.3e-23 111.3 173 37.0
GSVIVG01022405001 Vitis vinifera HOM05D004603 ORTHO05D005244 2.7e-22 109.8 184 38.6
Sabra01G0018000 Salix brachista HOM05D004603 ORTHO05D005244 3.5e-22 109.4 177 37.9
Atru.chr11.2495 Acer truncatum HOM05D004603 ORTHO05D005244 8.7e-21 104.8 181 38.1
Atru.chr11.2466 Acer truncatum HOM05D004603 ORTHO05D005244 1.1e-20 104.4 181 38.1
QL04p013733 Quercus lobata HOM05D004603 ORTHO05D005244 3.3e-20 102.8 182 35.7
Haze_03089 Corylus avellana HOM05D004603 ORTHO05D005244 1.6e-19 100.5 182 35.2
Cfa010862 Carpinus fangiana HOM05D004603 ORTHO05D005244 1.8e-18 97.1 182 34.6
Potri.003G201500 Populus trichocarpa HOM05D004603 ORTHO05D005244 3.1e-18 96.3 184 37.5
Gohir.D04G071400 Gossypium hirsutum HOM05D004603 ORTHO05D005244 4.0e-18 95.9 173 35.8
Gorai.012G080400 Gossypium raimondii HOM05D004603 ORTHO05D005244 6.9e-18 95.1 173 35.8
Sed0010230 Sechium edule HOM05D004603 ORTHO05D005244 9.0e-18 94.7 186 36.6
Ciclev10032728m.g Citrus clementina HOM05D004603 ORTHO05D005244 2.0e-17 93.6 181 34.8
Duzib114G1022 Durio zibethinus HOM05D004603 ORTHO05D005244 2.0e-17 93.6 174 35.6
Dinv32050 Davidia involucrata HOM05D004603 ORTHO05D005244 3.4e-17 92.8 182 36.3
Hma1.2p1_0902F.1_g234830 Hydrangea macrophylla HOM05D004603 ORTHO05D005244 3.4e-17 92.8 181 35.4
arahy.Tifrunner.gnm1.ann1.S7XKIQ Arachis hypogaea HOM05D004603 ORTHO05D005244 7.6e-17 91.7 181 33.7
CsaV3_5G036510 Cucumis sativus L. HOM05D004603 ORTHO05D005244 1.0e-16 91.3 180 36.1
Lj3g0020788 Lotus japonicus HOM05D004603 ORTHO05D005244 1.0e-16 91.3 169 33.7
arahy.Tifrunner.gnm1.ann1.FEA8VP Arachis hypogaea HOM05D004603 ORTHO05D005244 1.7e-16 90.5 171 33.3
arahy.Tifrunner.gnm1.ann1.30UV9I Arachis hypogaea HOM05D004603 ORTHO05D005244 3.8e-16 89.4 171 32.7
MELO3C012448.2 Cucumis melo HOM05D004603 ORTHO05D005244 3.8e-16 89.4 180 35.0
Lalb_Chr19g0138841 Lupinus albus HOM05D004603 ORTHO05D005244 3.8e-16 89.4 177 35.0
Aqoxy2G00300 Aquilegia oxysepala HOM05D004603 ORTHO05D005244 4.9e-16 89.0 188 33.5
Duzib128G1390 Durio zibethinus HOM05D004603 ORTHO05D005244 6.5e-16 88.6 180 32.8
Psat7g182960 Pisum sativum HOM05D004603 ORTHO05D005244 6.5e-16 88.6 177 32.8
Sed0015753 Sechium edule HOM05D004603 ORTHO05D005244 6.5e-16 88.6 186 35.5
ATR0721G140 Amborella trichopoda HOM05D004603 ORTHO05D005244 1.9e-15 87.0 103 45.6
PSO170G0256 Papaver somniferum HOM05D004603 ORTHO05D005244 1.9e-15 87.0 185 35.7
CiPaw.13G010800 Carya illinoinensis HOM05D004603 ORTHO05D005244 3.2e-15 86.3 161 32.9
Manes.11G002700 Manihot esculenta HOM05D004603 ORTHO05D005244 3.2e-15 86.3 174 32.2
PSO017G3894 Papaver somniferum HOM05D004603 ORTHO05D005244 3.2e-15 86.3 187 36.4
PSO528G0152 Papaver somniferum HOM05D004603 ORTHO05D005244 4.2e-15 85.9 183 36.1
COL.COLO4_25832 Corchorus olitorius HOM05D004603 ORTHO05D005244 7.1e-15 85.1 173 34.1
Eucgr.G03257 Eucalyptus grandis HOM05D004603 ORTHO05D005244 7.1e-15 85.1 176 34.1
Thecc.10G006000 Theobroma cacao HOM05D004603 ORTHO05D005244 1.6e-14 84.0 168 32.7
Ciclev10017990m.g Citrus clementina HOM05D004603 ORTHO05D005244 2.7e-14 83.2 153 34.6
Glyma.12G039500 Glycine max HOM05D004603 ORTHO05D005244 2.7e-14 83.2 177 31.6
Cpa.g.sc197.6 Carica papaya HOM05D004603 ORTHO05D005244 4.6e-14 82.4 182 34.1
Ca_20912_v3 Cicer arietinum L. HOM05D004603 ORTHO05D005244 4.6e-14 82.4 182 34.6
Medtr4g071040 Medicago truncatula HOM05D004603 ORTHO05D005244 6.0e-14 82.0 171 33.9
ATR0217G019 Amborella trichopoda HOM05D004603 ORTHO05D005244 3.0e-13 79.7 94 44.7
Nitab4.5_0013777g0030 Nicotiana tabacum HOM05D004603 ORTHO05D005244 3.0e-13 79.7 173 31.8
PGR031G2747 Punica granatum HOM05D004603 ORTHO05D005244 3.0e-13 79.7 177 32.8
CiPaw.14G006000 Carya illinoinensis HOM05D004603 ORTHO05D005244 3.9e-13 79.3 176 30.7
MD00G1188600 Malus domestica HOM05D004603 ORTHO05D005244 3.9e-13 79.3 172 34.3
PSO063G4454 Papaver somniferum HOM05D004603 ORTHO05D005244 5.1e-13 79.0 189 34.9
TWI63G1183 Tripterygium wilfordii HOM05D004603 ORTHO05D005244 5.1e-13 79.0 183 35.0
Rhsim07G0062700 Rhododendron simsii HOM05D004603 ORTHO05D005244 6.7e-13 78.6 184 31.0
Ca_14312_v3 Cicer arietinum L. HOM05D004603 ORTHO05D005244 8.7e-13 78.2 170 34.7
CAN.G745.15 Capsicum annuum HOM05D004603 ORTHO05D005244 1.1e-12 77.8 172 33.1
CDE08G1561 Ceratophyllum demersum HOM05D004603 ORTHO05D005244 1.1e-12 77.8 174 32.2
Nitab4.5_0000316g0040 Nicotiana tabacum HOM05D004603 ORTHO05D005244 1.1e-12 77.8 173 32.4
Atru.chr11.786 Acer truncatum HOM05D004603 ORTHO05D005244 1.5e-12 77.4 100 41.0
TWI38G0287 Tripterygium wilfordii HOM05D004603 ORTHO05D005244 2.5e-12 76.6 185 31.9
Glyma.11G113600 Glycine max HOM05D004603 ORTHO05D005244 3.3e-12 76.3 177 32.2
Lj9A646T46 Lonicera japonica HOM05D004603 ORTHO05D005244 3.3e-12 76.3 188 31.4
Actinidia21527 Actinidia chinensis HOM05D004603 ORTHO05D005244 4.3e-12 75.9 187 30.5
COL.COLO4_29439 Corchorus olitorius HOM05D004603 ORTHO05D005244 4.3e-12 75.9 171 33.3
MSTRG.20534 Avicennia marina HOM05D004603 ORTHO05D005244 5.7e-12 75.5 182 31.9
MD02G1294600 Malus domestica HOM05D004603 ORTHO05D005244 5.7e-12 75.5 172 31.4
Lj1A1244T16 Lonicera japonica HOM05D004603 ORTHO05D005244 7.4e-12 75.1 186 31.7
CANSAT35G1099 Cannabis sativa HOM05D004603 ORTHO05D005244 9.6e-12 74.7 178 33.1
DCAR_031824 Daucus carota HOM05D004603 ORTHO05D005244 9.6e-12 74.7 184 31.5
Phvul.010G125900 Phaseolus vulgaris HOM05D004603 ORTHO05D005244 1.3e-11 74.3 176 30.7
RcHm_v2.0_Chr1g0319701 Rosa chinensis HOM05D004603 ORTHO05D005244 1.3e-11 74.3 171 32.7
Cc02_g29120 Coffea canephora HOM05D004603 ORTHO05D005244 2.1e-11 73.6 180 29.4
Lj2g0001718 Lotus japonicus HOM05D004603 ORTHO05D005244 2.1e-11 73.6 97 39.2
Solyc01g068450.4 Solanum lycopersicum HOM05D004603 ORTHO05D005244 2.1e-11 73.6 173 31.8
Peaxi162Scf00047g02136 Petunia axillaris HOM05D004603 ORTHO05D005244 2.8e-11 73.2 167 32.3
Sopen01g030410 Solanum pennellii HOM05D004603 ORTHO05D005244 2.8e-11 73.2 173 32.4
VMungo1127G0155 Vigna mungo HOM05D004603 ORTHO05D005244 2.8e-11 73.2 170 28.8
VMungo1127G1982 Vigna mungo HOM05D004603 ORTHO05D005244 8.2e-11 71.6 181 29.8
ClCG05G020790 Citrullus lanatus HOM05D004603 ORTHO05D005244 1.1e-10 71.2 96 40.6
FAN03G3254 Fragaria x ananassa HOM05D004603 ORTHO05D005244 1.1e-10 71.2 175 33.1
Peaxi162Scf00309g00324 Petunia axillaris HOM05D004603 ORTHO05D005244 1.4e-10 70.9 174 31.6
Os01g0950800 Oryza sativa ssp. japonica HOM05D004603 ORTHO05D005244 2.4e-10 70.1 180 33.9
Zm00001eb140990 Zea mays HOM05D004603 ORTHO05D005244 3.1e-10 69.7 178 33.1
ECA248G3322 Erigeron canadensis HOM05D004603 ORTHO05D005244 4.1e-10 69.3 184 30.4
FAN01G0231 Fragaria x ananassa HOM05D000001 ORTHO05D009083 4.1e-10 69.3 175 32.6
FAN10G0154 Fragaria x ananassa HOM05D004603 ORTHO05D005244 4.1e-10 69.3 175 32.6
FAN06G0782 Fragaria x ananassa HOM05D000001 ORTHO05D009083 5.3e-10 68.9 172 31.4
TPR.G30506 Trifolium pratense HOM05D004603 ORTHO05D005244 6.9e-10 68.6 182 28.6
HanXRQChr15g0493861 Helianthus annuus HOM05D004603 ORTHO05D005244 9.0e-10 68.2 180 32.8
Sabra03G0149000 Salix brachista HOM05D004603 ORTHO05D005244 1.2e-09 67.8 120 38.3
vmacro13728 Vaccinium macrocarpon HOM05D004603 ORTHO05D005244 1.2e-09 67.8 184 29.3
DCAR_009134 Daucus carota HOM05D004603 ORTHO05D005244 1.5e-09 67.4 176 32.4
Gohir.A05G333100 Gossypium hirsutum HOM05D004603 ORTHO05D005244 2.6e-09 66.6 96 38.5
Aa31LG6G8480 Aethionema arabicum HOM05D004603 ORTHO05D005244 4.5e-09 65.9 177 31.1
SGA_v2.0_scaffold119G32802 Striga asiatica HOM05D004603 ORTHO05D005244 4.5e-09 65.9 178 28.7
Hund13330 Selenicereus undatus HOM05D004603 ORTHO05D005244 1.0e-08 64.7 180 30.0
Zm00001eb363050 Zea mays HOM05D004603 ORTHO05D005244 1.0e-08 64.7 98 40.8
CSS0012283 Camellia sinensis var. sinensis HOM05D004603 ORTHO05D005244 1.3e-08 64.3 101 37.6
PGSC0003DMG400023243 Solanum tuberosum HOM05D004603 ORTHO05D005244 1.3e-08 64.3 143 30.8
CSS0050281 Camellia sinensis var. sinensis HOM05D004603 ORTHO05D005244 2.2e-08 63.5 101 37.6
TPR.G3881 Trifolium pratense HOM05D004603 ORTHO05D005244 2.2e-08 63.5 96 37.5
Prupe.2G029400 Prunus persica HOM05D004603 ORTHO05D005244 2.9e-08 63.2 97 37.1
Migut.B01205 Erythranthe guttata HOM05D004603 ORTHO05D005244 3.8e-08 62.8 179 30.2
SalBow5G1211 Salvia bowleyana HOM05D004603 ORTHO05D005244 3.8e-08 62.8 180 28.9
SEGI_15222 Sequoiadendron giganteum HOM05D004603 ORTHO05D005244 3.8e-08 62.8 166 30.1
MD07G1031900 Malus domestica HOM05D004603 ORTHO05D005244 5.0e-08 62.4 99 38.4
SEGI_29054 Sequoiadendron giganteum HOM05D004603 ORTHO05D005244 5.0e-08 62.4 184 30.4
SalBow1G4372 Salvia bowleyana HOM05D004603 ORTHO05D005244 6.5e-08 62.0 180 30.0
Actinidia30721 Actinidia chinensis HOM05D004603 ORTHO05D005244 2.5e-07 60.1 125 32.0
HPP92_010478 Vanilla planifolia HOM05D004603 ORTHO05D005244 2.5e-07 60.1 182 28.6
EL10Ac2g02852 Beta vulgaris HOM05D004603 ORTHO05D005244 2.1e-06 57.0 102 37.3
SalBow5G1267 Salvia bowleyana HOM05D004603 ORTHO05D005244 2.1e-06 57.0 180 28.3
DCAR_024211 Daucus carota HOM05D004603 ORTHO05D005244 4.6e-06 55.8 172 31.4
Nn3g18490 Nelumbo nucifera HOM05D051960 ORTHO05D005244 6.1e-06 55.5 40 62.5


User provided reference genes

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