Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g04792_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 3.0e-246 854.7 438 100.0
Prupe.7G050100 Prunus persica HOM05D003740 ORTHO05D004611 3.3e-176 622.1 407 75.9
Dinv05312 Davidia involucrata HOM05D003740 ORTHO05D004611 1.8e-174 616.3 411 76.9
MD12G1086200 Malus domestica HOM05D003740 ORTHO05D004611 6.9e-174 614.4 407 75.7
Eucgr.A02296 Eucalyptus grandis HOM05D003740 ORTHO05D004611 9.9e-173 610.5 413 75.5
Actinidia38142 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.7e-172 609.8 407 77.4
Lj5g0015883 Lotus japonicus HOM05D003740 ORTHO05D004611 2.9e-172 609.0 407 75.7
Actinidia39193 Actinidia chinensis HOM05D003740 ORTHO05D004611 4.9e-172 608.2 408 76.7
Dinv34246 Davidia involucrata HOM05D003740 ORTHO05D004611 6.4e-172 607.8 411 76.4
Prupe.1G032300 Prunus persica HOM05D003740 ORTHO05D004611 1.1e-171 607.1 407 74.0
GSVIVG01033552001 Vitis vinifera HOM05D003740 ORTHO05D004611 1.4e-171 606.7 369 80.5
RcHm_v2.0_Chr3g0484361 Rosa chinensis HOM05D003740 ORTHO05D004611 1.9e-171 606.3 407 75.2
TWI74G0940 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 1.9e-171 606.3 414 75.1
MELO3C014202.2 Cucumis melo HOM05D003740 ORTHO05D004611 2.4e-171 605.9 413 74.6
TWI53G1619 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.4e-171 605.9 408 74.8
ClCG04G004010 Citrullus lanatus HOM05D003740 ORTHO05D004611 3.2e-171 605.5 413 74.3
Migut.K00119 Erythranthe guttata HOM05D003740 ORTHO05D004611 5.4e-171 604.7 407 75.4
DCAR_020539 Daucus carota HOM05D003740 ORTHO05D004611 9.3e-171 604.0 413 76.0
Ciclev10005020m.g Citrus clementina HOM05D003740 ORTHO05D004611 1.2e-170 603.6 408 74.8
MD14G1080600 Malus domestica HOM05D003740 ORTHO05D004611 1.6e-170 603.2 408 74.3
CsaV3_4G027630 Cucumis sativus L. HOM05D003740 ORTHO05D004611 2.1e-170 602.8 413 74.6
TWI77G0796 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.1e-170 602.8 408 74.5
Lsat_1_v5_gn_6_15201 Lactuca sativa HOM05D003740 ORTHO05D004611 2.7e-170 602.4 407 76.2
Nn6g34910 Nelumbo nucifera HOM05D003740 ORTHO05D004611 4.6e-170 601.7 381 79.0
Nn7g37216 Nelumbo nucifera HOM05D003740 ORTHO05D004611 6.0e-170 601.3 389 77.4
VMungo0720G0943 Vigna mungo HOM05D003740 ORTHO05D004611 6.0e-170 601.3 407 75.7
Duzib128G1723 Durio zibethinus HOM05D003740 ORTHO05D004611 1.7e-169 599.7 412 74.5
Sed0013360 Sechium edule HOM05D003740 ORTHO05D004611 1.7e-169 599.7 414 73.9
THA.LOC104816968 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 2.3e-169 599.4 407 74.9
Lalb_Chr02g0156411 Lupinus albus HOM05D003740 ORTHO05D004611 3.9e-169 598.6 404 75.2
PGR004G2716 Punica granatum HOM05D003740 ORTHO05D004611 5.1e-169 598.2 407 75.2
Manes.08G053600 Manihot esculenta HOM05D003740 ORTHO05D004611 6.6e-169 597.8 407 74.0
Medtr3g045150 Medicago truncatula HOM05D003740 ORTHO05D004611 6.6e-169 597.8 407 75.9
TAR636G0750 Trochodendron aralioides HOM05D003740 ORTHO05D004611 6.6e-169 597.8 407 75.7
Sc13g0001500 Simmondsia chinensis HOM05D003740 ORTHO05D004611 8.7e-169 597.4 413 72.9
FvH4_6g24760 Fragaria vesca HOM05D003740 ORTHO05D004611 1.9e-168 596.3 407 73.5
Glyma.02G190700 Glycine max HOM05D003740 ORTHO05D004611 1.9e-168 596.3 410 74.9
Ah.13g076780 Amaranthus hybridus HOM05D003740 ORTHO05D004611 2.5e-168 595.9 414 73.9
Atru.chr1.1193 Acer truncatum HOM05D003740 ORTHO05D004611 3.3e-168 595.5 386 77.5
FAN09G1292 Fragaria x ananassa HOM05D003740 ORTHO05D004611 3.3e-168 595.5 407 73.2
THA.LOC104803288 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 4.3e-168 595.1 412 74.0
Rhsim03G0031000 Rhododendron simsii HOM05D003740 ORTHO05D004611 5.6e-168 594.7 381 78.2
TPR.G19664 Trifolium pratense HOM05D003740 ORTHO05D004611 5.6e-168 594.7 411 75.2
FAN14G5242 Fragaria x ananassa HOM05D003740 ORTHO05D004611 7.3e-168 594.3 408 73.0
Peaxi162Scf00130g01015 Petunia axillaris HOM05D003740 ORTHO05D004611 7.3e-168 594.3 407 74.2
Phvul.007G249500 Phaseolus vulgaris HOM05D003740 ORTHO05D004611 7.3e-168 594.3 407 74.2
Sed0006234 Sechium edule HOM05D003740 ORTHO05D004611 7.3e-168 594.3 414 73.2
CDE08G1337 Ceratophyllum demersum HOM05D003740 ORTHO05D004611 9.6e-168 594.0 334 88.3
Glyma.10G105900 Glycine max HOM05D003740 ORTHO05D004611 9.6e-168 594.0 407 74.4
Medtr0012s0090 Medicago truncatula HOM05D003740 ORTHO05D004611 9.6e-168 594.0 407 75.4
FAN05G1357 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.3e-167 593.6 407 72.7
Ca_25790_v3 Cicer arietinum L. HOM05D003740 ORTHO05D004611 3.6e-167 592.0 408 75.5
Gohir.D09G116000 Gossypium hirsutum HOM05D003740 ORTHO05D004611 3.6e-167 592.0 410 73.4
Sopen04g008590 Solanum pennellii HOM05D003740 ORTHO05D004611 4.8e-167 591.7 412 72.6
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea HOM05D003740 ORTHO05D004611 8.1e-167 590.9 369 79.4
MSTRG.10801 Avicennia marina HOM05D003740 ORTHO05D004611 8.1e-167 590.9 408 74.5
Gohir.A09G119800 Gossypium hirsutum HOM05D003740 ORTHO05D004611 8.1e-167 590.9 410 73.2
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea HOM05D003740 ORTHO05D004611 1.1e-166 590.5 370 79.7
Atru.chr6.1381 Acer truncatum HOM05D003740 ORTHO05D004611 1.4e-166 590.1 407 74.4
QL07p005086 Quercus lobata HOM05D003740 ORTHO05D004611 1.4e-166 590.1 365 79.7
EL10Ac3g07158 Beta vulgaris HOM05D003740 ORTHO05D004611 4.0e-166 588.6 413 73.6
CSS0019779 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 5.3e-166 588.2 369 79.4
Rhsim04G0107900 Rhododendron simsii HOM05D003740 ORTHO05D004611 5.3e-166 588.2 365 80.0
SGA_v2.0_scaffold105G30359 Striga asiatica HOM05D003740 ORTHO05D004611 5.3e-166 588.2 411 73.5
Cfa016754 Carpinus fangiana HOM05D003740 ORTHO05D004611 6.9e-166 587.8 407 73.2
Thecc.05G145300 Theobroma cacao HOM05D003740 ORTHO05D004611 6.9e-166 587.8 408 74.5
CiPaw.09G042200 Carya illinoinensis HOM05D003740 ORTHO05D004611 9.0e-166 587.4 407 73.0
Haze_19750 Corylus avellana HOM05D003740 ORTHO05D004611 9.0e-166 587.4 407 73.2
BolC4t21915H Brassica oleracea HOM05D003740 ORTHO05D004611 1.2e-165 587.0 407 73.2
Psat6g118200 Pisum sativum HOM05D003740 ORTHO05D004611 1.2e-165 587.0 407 74.0
AT2G41490 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 2.0e-165 586.3 412 73.3
BraA05t19226Z Brassica rapa HOM05D003740 ORTHO05D004611 2.0e-165 586.3 407 73.7
RcHm_v2.0_Chr3g0484511 Rosa chinensis HOM05D003740 ORTHO05D004611 2.0e-165 586.3 407 74.0
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 3.4e-165 585.5 361 80.1
HanXRQChr10g0277771 Helianthus annuus HOM05D003740 ORTHO05D004611 3.4e-165 585.5 408 74.8
AL4G39580 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 4.5e-165 585.1 412 73.8
MSTRG.26143 Avicennia marina HOM05D003740 ORTHO05D004611 4.5e-165 585.1 409 73.8
Lalb_Chr21g0316601 Lupinus albus HOM05D003740 ORTHO05D004611 5.8e-165 584.7 399 75.4
C04p02750 Brassica napus HOM05D003740 ORTHO05D004611 9.9e-165 583.9 407 73.0
A05p02310 Brassica napus HOM05D003740 ORTHO05D004611 1.3e-164 583.6 407 73.0
AUR62026121 Chenopodium quinoa HOM05D003740 ORTHO05D004611 1.3e-164 583.6 411 73.7
Gorai.006G134300 Gossypium raimondii HOM05D003740 ORTHO05D004611 1.3e-164 583.6 407 73.0
BcaNung06793 Brassica carinata HOM05D003740 ORTHO05D004611 3.8e-164 582.0 412 72.8
AUR62024529 Chenopodium quinoa HOM05D003740 ORTHO05D004611 3.8e-164 582.0 411 72.7
Oeu006922.2 Olea europaea HOM05D003740 ORTHO05D004611 3.8e-164 582.0 389 76.9
Sp4g23760 Schrenkiella parvula HOM05D003740 ORTHO05D004611 4.9e-164 581.6 415 72.8
CARHR136610 Cardamine hirsuta HOM05D003740 ORTHO05D004611 8.4e-164 580.9 415 72.5
PSO384G1999 Papaver somniferum HOM05D003740 ORTHO05D004611 1.1e-163 580.5 407 73.7
Migut.J01706 Erythranthe guttata HOM05D003740 ORTHO05D004611 1.9e-163 579.7 407 74.0
PSO339G5696 Papaver somniferum HOM05D003740 ORTHO05D004611 1.9e-163 579.7 407 73.7
C08p32520 Brassica napus HOM05D003740 ORTHO05D004611 4.2e-163 578.6 407 72.7
BolC8t50867H Brassica oleracea HOM05D003740 ORTHO05D004611 4.2e-163 578.6 407 72.7
Carub.0005s2403 Capsella rubella HOM05D003740 ORTHO05D004611 4.2e-163 578.6 414 72.7
AL5G38710 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 7.1e-163 577.8 407 72.7
FAN02G1973 Fragaria x ananassa HOM05D003740 ORTHO05D004611 7.1e-163 577.8 386 74.1
Sabra16G0047800 Salix brachista HOM05D003740 ORTHO05D004611 7.1e-163 577.8 369 77.0
A09p50150 Brassica napus HOM05D003740 ORTHO05D004611 1.6e-162 576.6 407 72.5
BraA09t40467Z Brassica rapa HOM05D003740 ORTHO05D004611 1.6e-162 576.6 407 72.5
BraA04t16052Z Brassica rapa HOM05D003740 ORTHO05D004611 3.5e-162 575.5 407 73.2
Carub.0004s2379 Capsella rubella HOM05D003740 ORTHO05D004611 4.6e-162 575.1 412 72.1
AT3G57220 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 7.9e-162 574.3 407 72.0
BcaC02g09904 Brassica carinata HOM05D003740 ORTHO05D004611 1.8e-161 573.2 407 71.7
C04p35340 Brassica napus HOM05D003740 ORTHO05D004611 1.8e-161 573.2 407 71.7
BolC4t25088H Brassica oleracea HOM05D003740 ORTHO05D004611 1.8e-161 573.2 407 71.7
Lj2A390G27 Lonicera japonica HOM05D003740 ORTHO05D004611 1.8e-161 573.2 409 73.3
Thhalv10005999m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 2.3e-161 572.8 411 72.3
Thhalv10016688m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 3.0e-161 572.4 412 71.6
Thhalv10007732m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 1.1e-160 570.5 407 72.0
Potri.006G045700 Populus trichocarpa HOM05D003740 ORTHO05D004611 1.1e-160 570.5 369 75.9
BcaB02g08329 Brassica carinata HOM05D003740 ORTHO05D004611 1.9e-160 569.7 371 76.0
Aqoxy2G02041 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 2.5e-160 569.3 407 71.7
Potri.016G042100 Populus trichocarpa HOM05D003740 ORTHO05D004611 2.5e-160 569.3 369 75.6
Solyc04g016520.3 Solanum lycopersicum HOM05D003740 ORTHO05D004611 1.6e-159 566.6 412 70.6
unitig_748.g7227 Utricularia gibba HOM05D003740 ORTHO05D004611 2.1e-159 566.2 390 73.6
SEGI_04340 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 4.8e-159 565.1 383 74.2
PGSC0003DMG400012722 Solanum tuberosum HOM05D003740 ORTHO05D004611 5.3e-158 561.6 412 70.4
Aa31LG1G23510 Aethionema arabicum HOM05D003740 ORTHO05D004611 1.2e-157 560.5 411 69.8
Cc06_g18360 Coffea canephora HOM05D003740 ORTHO05D004611 1.5e-157 560.1 369 76.7
CSS0009879 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 1.9e-155 553.1 408 71.6
CANSAT80G1617 Cannabis sativa HOM05D003740 ORTHO05D004611 3.2e-155 552.4 407 69.3
Aa31LG10G12120 Aethionema arabicum HOM05D003740 ORTHO05D004611 6.7e-153 544.7 457 63.9
Os07g0661100 Oryza sativa ssp. japonica HOM05D003740 ORTHO05D004611 2.5e-152 542.7 353 75.4
CAN.G1237.3 Capsicum annuum HOM05D003740 ORTHO05D004611 3.7e-151 538.9 315 83.5
Lj1A1122T44 Lonicera japonica HOM05D003740 ORTHO05D004611 8.2e-151 537.7 415 69.2
Zm00001eb110840 Zea mays HOM05D003740 ORTHO05D004611 8.2e-151 537.7 411 68.6
A04p03820 Brassica napus HOM05D003740 ORTHO05D004611 1.8e-150 536.6 407 70.0
Nitab4.5_0000826g0260 Nicotiana tabacum HOM05D003740 ORTHO05D004611 4.0e-150 535.4 437 65.0
CANSAT80G1359 Cannabis sativa HOM05D003740 ORTHO05D004611 2.0e-149 533.1 407 67.6
Zm00001eb329870 Zea mays HOM05D003740 ORTHO05D004611 3.4e-149 532.3 390 70.5
ATR0782G053 Amborella trichopoda HOM05D003740 ORTHO05D004611 1.7e-148 530.0 368 73.4
SMO364G0515 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 1.7e-148 530.0 373 70.5
SalBow1G2954 Salvia bowleyana HOM05D003740 ORTHO05D004611 5.5e-147 525.0 436 66.3
Duzib106G0923 Durio zibethinus HOM05D003740 ORTHO05D004611 9.3e-147 524.2 407 69.0
COL.COLO4_21300 Corchorus olitorius HOM05D003740 ORTHO05D004611 4.6e-146 521.9 360 74.4
Hund19125 Selenicereus undatus HOM05D003740 ORTHO05D004611 5.1e-145 518.5 441 64.9
TPR.G2316 Trifolium pratense HOM05D003740 ORTHO05D004611 4.3e-144 515.4 369 69.9
Pp3c2_18380 Physcomitrium patens HOM05D003740 ORTHO05D004611 2.8e-143 512.7 375 69.3
DCAR_016970 Daucus carota HOM05D003740 ORTHO05D004611 5.3e-142 508.4 414 66.9
BcaC07g40064 Brassica carinata HOM05D003740 ORTHO05D004611 3.2e-139 499.2 302 80.8
TAR633G2274 Trochodendron aralioides HOM05D003740 ORTHO05D004611 8.8e-137 491.1 300 81.3
Mapoly0120s0027 Marchantia polymorpha HOM05D003740 ORTHO05D004611 8.2e-135 484.6 368 65.2
Medtr8g446850 Medicago truncatula HOM05D003740 ORTHO05D004611 1.1e-134 484.2 337 75.1
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.4e-134 483.8 382 65.2
CARHR167400 Cardamine hirsuta HOM05D003740 ORTHO05D004611 1.0e-129 467.6 339 72.0
RcHm_v2.0_Chr3g0484421 Rosa chinensis HOM05D003740 ORTHO05D004611 1.1e-126 457.6 397 64.2
SHI12878 Sapria himalayana HOM05D003740 ORTHO05D004611 3.5e-125 452.6 368 62.8
AUR62004393 Chenopodium quinoa HOM05D003740 ORTHO05D004611 2.2e-124 449.9 370 65.1
TPR.G11551 Trifolium pratense HOM05D003740 ORTHO05D004611 1.0e-121 441.0 392 62.2
vmacro09044 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 5.3e-118 428.7 241 88.4
AUR62022599 Chenopodium quinoa HOM05D003740 ORTHO05D004611 1.1e-110 404.4 335 63.9
SMO112G0012 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 2.4e-110 403.3 251 78.1
CiPaw.10G036600 Carya illinoinensis HOM05D003740 ORTHO05D004611 1.3e-100 370.9 211 86.7
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.1e-94 351.3 407 48.2
Sp5g05360 Schrenkiella parvula HOM05D003740 ORTHO05D004611 1.2e-93 347.8 211 81.0
Cre16.g663100 Chlamydomonas reinhardtii HOM05D003740 ORTHO05D004611 9.5e-91 338.2 370 48.6
PRCOL_00006546 Prasinoderma coloniale HOM05D003740 ORTHO05D004611 1.2e-90 337.8 375 49.1
CBR_g48687 Chara braunii HOM05D003740 ORTHO05D004611 3.4e-88 329.7 273 60.4
SEGI_25729 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 6.4e-79 298.9 178 79.8
SGA_v2.0_scaffold69G23130 Striga asiatica HOM05D003740 ORTHO05D004611 2.1e-77 293.9 339 52.2
Haze_26500 Corylus avellana HOM05D003740 ORTHO05D004611 5.6e-67 259.2 403 39.2
MCO05G206 Micromonas commoda HOM05D003740 ORTHO05D004611 1.3e-63 248.1 282 49.3
Aqoxy6G01654 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 1.6e-61 241.1 222 58.1
HPP92_001282 Vanilla planifolia HOM05D003740 ORTHO05D004611 1.3e-60 238.0 219 58.0
Cfa024885 Carpinus fangiana HOM05D003740 ORTHO05D004611 1.1e-59 235.0 313 43.1
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.1e-51 208.4 185 60.0
Cpa.g.sc120.7 Carica papaya HOM05D003740 ORTHO05D004611 1.5e-51 208.0 131 77.1
Psat6g050760 Pisum sativum HOM05D003740 ORTHO05D018044 8.1e-50 202.2 120 78.3
Actinidia17677 Actinidia chinensis HOM05D003740 ORTHO05D004611 3.9e-36 156.8 408 33.6
MBI05_g15360_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 1.0e-28 132.1 69 97.1
Cpa.g.c37387 Carica papaya HOM05D003740 ORTHO05D004611 1.3e-26 125.2 133 50.4
vmacro09045 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.4e-25 121.7 76 76.3
SMO112G0048 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 1.9e-22 111.3 75 72.0
TPR.G13517 Trifolium pratense HOM05D003740 ORTHO05D027079 4.2e-22 110.2 85 63.5
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus HOM05D003740 ORTHO05D027079 2.0e-16 91.3 123 47.2
Nitab4.5_0001618g0330 Nicotiana tabacum HOM05D003740 ORTHO05D004611 5.9e-16 89.7 52 78.8
BcaC09g48688 Brassica carinata HOM05D003740 ORTHO05D027079 2.2e-15 87.8 101 47.5
TPR.G40499 Trifolium pratense HOM05D003740 ORTHO05D004611 3.6e-13 80.5 60 63.3
BcaC02g11255 Brassica carinata HOM05D003740 ORTHO05D015230 2.0e-11 74.7 74 51.4
Pp3c1_19750 Physcomitrium patens HOM05D003740 ORTHO05D004611 4.2e-06 57.0 103 37.9
TPR.G2297 Trifolium pratense HOM05D003740 ORTHO05D411092 7.2e-06 56.2 67 44.8
BcaNung06569 Brassica carinata HOM05D003740 ORTHO05D027079 9.4e-06 55.8 86 44.2
A03p42520 Brassica napus HOM05D024621 ORTHO05D015230 9.4e-06 55.8 55 54.5


User provided reference genes

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