Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g04211_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D001297 4.5e-118 427.9 216 100.0
MBI02_g07510_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 6.8e-50 201.4 188 62.2
MBI04_g40088_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 7.9e-22 108.2 63 79.4
MBI02_g15124_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D242580 1.5e-20 104.0 136 51.5
MBI12_g03593_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D240830 5.6e-20 102.1 102 59.8
MBI01_g16636_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 9.3e-15 84.7 89 52.8
TAR624G0085 Trochodendron aralioides HOM05D001437 ORTHO05D001297 3.5e-14 82.8 73 54.8
Hma1.2p1_0018F.1_g013230 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 4.6e-14 82.4 91 47.3
Glyma.09G188300 Glycine max HOM05D001437 ORTHO05D001297 7.9e-14 81.6 85 48.2
Lalb_Chr05g0222691 Lupinus albus HOM05D001437 ORTHO05D001297 1.8e-13 80.5 113 38.9
Dinv41584 Davidia involucrata HOM05D001437 ORTHO05D001297 2.3e-13 80.1 91 48.4
Glyma.05G232200 Glycine max HOM05D001437 ORTHO05D001297 2.3e-13 80.1 73 52.1
Medtr8g103750 Medicago truncatula HOM05D001437 ORTHO05D001297 2.3e-13 80.1 73 53.4
TAR636G1076 Trochodendron aralioides HOM05D001437 ORTHO05D001297 3.0e-13 79.7 73 54.8
TAR636G2605 Trochodendron aralioides HOM05D001437 ORTHO05D001297 3.0e-13 79.7 73 54.8
Lalb_Chr14g0371371 Lupinus albus HOM05D001437 ORTHO05D001297 5.1e-13 79.0 80 51.2
Glyma.07G088500 Glycine max HOM05D001437 ORTHO05D001297 1.5e-12 77.4 73 49.3
Lj2g0023387 Lotus japonicus HOM05D001437 ORTHO05D001297 1.5e-12 77.4 94 42.6
GSVIVG01017129001 Vitis vinifera HOM05D001437 ORTHO05D001297 1.5e-12 77.4 111 42.3
TAR383G0599 Trochodendron aralioides HOM05D001437 ORTHO05D001297 2.5e-12 76.6 96 41.7
CiPaw.08G016300 Carya illinoinensis HOM05D001437 ORTHO05D001297 1.6e-11 73.9 74 52.7
Dinv36609 Davidia involucrata HOM05D001437 ORTHO05D001297 1.6e-11 73.9 61 59.0
Phvul.002G314400 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 2.1e-11 73.6 89 43.8
Dinv30219 Davidia involucrata HOM05D001437 ORTHO05D001297 2.8e-11 73.2 74 51.4
Nn2g11804 Nelumbo nucifera HOM05D001437 ORTHO05D001297 2.8e-11 73.2 73 50.7
Psat7g014040 Pisum sativum HOM05D001437 ORTHO05D001297 2.8e-11 73.2 73 46.6
CiPaw.04G166600 Carya illinoinensis HOM05D001437 ORTHO05D001297 3.7e-11 72.8 72 52.8
Glyma.08G039600 Glycine max HOM05D001437 ORTHO05D001297 3.7e-11 72.8 88 44.3
Hma1.2p1_0175F.1_g077322 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 3.7e-11 72.8 75 49.3
vmacro20662 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 4.8e-11 72.4 135 34.8
Duzib168G2108 Durio zibethinus HOM05D001437 ORTHO05D001297 6.3e-11 72.0 74 54.1
Ca_25439_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 8.2e-11 71.6 73 49.3
Nn8g39251 Nelumbo nucifera HOM05D001437 ORTHO05D001297 8.2e-11 71.6 62 54.8
Thecc.09G113500 Theobroma cacao HOM05D001437 ORTHO05D001297 8.2e-11 71.6 73 50.7
vmacro11110 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 8.2e-11 71.6 107 40.2
VMungo0251G3166 Vigna mungo HOM05D001437 ORTHO05D001297 8.2e-11 71.6 118 35.6
VMungo0251G3488 Vigna mungo HOM05D001437 ORTHO05D001297 8.2e-11 71.6 97 44.3
FvH4_1g05240 Fragaria vesca HOM05D001437 ORTHO05D001297 1.1e-10 71.2 79 46.8
FAN19G0712 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.1e-10 71.2 79 46.8
FAN23G2212 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.1e-10 71.2 79 46.8
FAN28G1375 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.1e-10 71.2 79 46.8
Lj4g0011940 Lotus japonicus HOM05D001437 ORTHO05D001297 1.1e-10 71.2 114 35.1
PSO782G3465 Papaver somniferum HOM05D001437 ORTHO05D001297 1.4e-10 70.9 84 48.8
Actinidia07417 Actinidia chinensis HOM05D001437 ORTHO05D001297 1.8e-10 70.5 91 44.0
CiPaw.07G217000 Carya illinoinensis HOM05D001437 ORTHO05D001297 1.8e-10 70.5 99 41.4
Haze_25691 Corylus avellana HOM05D001437 ORTHO05D001297 1.8e-10 70.5 73 50.7
Ca_25517_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 2.4e-10 70.1 62 51.6
PSO063G5179 Papaver somniferum HOM05D001437 ORTHO05D001297 2.4e-10 70.1 84 48.8
TWI32G1313 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 2.4e-10 70.1 129 37.2
CSS0032954 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 3.1e-10 69.7 120 38.3
MBI17_g34051_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D242145 3.1e-10 69.7 37 86.5
GSVIVG01015419001 Vitis vinifera HOM05D001437 ORTHO05D001297 3.1e-10 69.7 74 45.9
Cfa003281 Carpinus fangiana HOM05D001437 ORTHO05D001297 4.1e-10 69.3 72 48.6
CANSAT56G1349 Cannabis sativa HOM05D001437 ORTHO05D001297 5.3e-10 68.9 119 37.0
Duzib150G0759 Durio zibethinus HOM05D001437 ORTHO05D001297 5.3e-10 68.9 73 49.3
Phvul.002G314500 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 6.9e-10 68.6 73 45.2
QL02p085888 Quercus lobata HOM05D001437 ORTHO05D001297 6.9e-10 68.6 87 43.7
CSS0017855 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 9.0e-10 68.2 74 47.3
CSS0033969 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 9.0e-10 68.2 74 47.3
CiPaw.03G234400 Carya illinoinensis HOM05D001437 ORTHO05D001297 9.0e-10 68.2 71 46.5
COL.COLO4_34887 Corchorus olitorius HOM05D001437 ORTHO05D001297 9.0e-10 68.2 108 37.0
Eucgr.A01700 Eucalyptus grandis HOM05D001437 ORTHO05D001297 9.0e-10 68.2 54 59.3
Lj8A609T42 Lonicera japonica HOM05D001437 ORTHO05D001297 9.0e-10 68.2 104 36.5
Lalb_Chr09g0331141 Lupinus albus HOM05D001437 ORTHO05D001297 9.0e-10 68.2 93 40.9
Gorai.004G279500 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.2e-09 67.8 73 49.3
TPR.G21675 Trifolium pratense HOM05D001437 ORTHO05D001297 1.2e-09 67.8 73 46.6
CANSAT56G0530 Cannabis sativa HOM05D001437 ORTHO05D001297 1.5e-09 67.4 91 41.8
Gohir.D05G023400 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.5e-09 67.4 73 47.9
Gorai.009G023500 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.5e-09 67.4 73 47.9
Cc06_g09450 Coffea canephora HOM05D001437 ORTHO05D001297 2.0e-09 67.0 85 42.4
Duzib187G0293 Durio zibethinus HOM05D001437 ORTHO05D001297 2.0e-09 67.0 73 49.3
Gohir.A08G240700 Gossypium hirsutum HOM05D001437 ORTHO05D001297 2.6e-09 66.6 73 47.9
TPR.G38992 Trifolium pratense HOM05D001437 ORTHO05D001297 2.6e-09 66.6 107 39.3
FAN26G1169 Fragaria x ananassa HOM05D001437 ORTHO05D001297 3.4e-09 66.2 79 45.6
FAN26G1470 Fragaria x ananassa HOM05D001437 ORTHO05D001297 3.4e-09 66.2 79 45.6
Rhsim02G0186900 Rhododendron simsii HOM05D001437 ORTHO05D001297 3.4e-09 66.2 66 51.5
RcHm_v2.0_Chr2g0090971 Rosa chinensis HOM05D001437 ORTHO05D001297 3.4e-09 66.2 79 45.6
Actinidia13292 Actinidia chinensis HOM05D001437 ORTHO05D001297 5.9e-09 65.5 74 45.9
Ciclev10007554m.g Citrus clementina HOM05D001437 ORTHO05D001297 5.9e-09 65.5 88 43.2
MBI08_g36303_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D241665 5.9e-09 65.5 54 70.4
vmacro06202 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 7.6e-09 65.1 94 45.7
CSS0011204 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.0e-08 64.7 74 47.3
CSS0049489 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.0e-08 64.7 74 47.3
Atru.chr7.1313 Acer truncatum HOM05D001437 ORTHO05D001297 1.3e-08 64.3 73 46.6
CSS0034517 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.3e-08 64.3 63 50.8
Gohir.A05G021800 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.3e-08 64.3 61 54.1
Potri.006G246100 Populus trichocarpa HOM05D001437 ORTHO05D001297 1.3e-08 64.3 106 42.5
QL12p031169 Quercus lobata HOM05D001437 ORTHO05D001297 1.3e-08 64.3 99 38.4
Rhsim03G0244400 Rhododendron simsii HOM05D001437 ORTHO05D001297 1.3e-08 64.3 87 47.1
Peaxi162Scf00546g00325 Petunia axillaris HOM05D001437 ORTHO05D001297 2.2e-08 63.5 89 43.8
Aqoxy7G01811 Aquilegia oxysepala HOM05D001437 ORTHO05D001297 2.9e-08 63.2 76 43.4
MBI18_g46592_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D010534 2.9e-08 63.2 43 74.4
Sed0023292 Sechium edule HOM05D001437 ORTHO05D001297 2.9e-08 63.2 154 31.2
MD02G1063100 Malus domestica HOM05D001437 ORTHO05D001297 3.8e-08 62.8 56 51.8
PSO210G5730 Papaver somniferum HOM05D001437 ORTHO05D001297 3.8e-08 62.8 67 49.3
TWI63G1217 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 3.8e-08 62.8 63 47.6
MSTRG.10681 Avicennia marina HOM05D001437 ORTHO05D001297 5.0e-08 62.4 129 38.0
Actinidia09409 Actinidia chinensis HOM05D001437 ORTHO05D001297 6.5e-08 62.0 73 45.2
Prupe.7G227900 Prunus persica HOM05D001437 ORTHO05D001297 6.5e-08 62.0 73 43.8
MELO3C004547.2 Cucumis melo HOM05D001437 ORTHO05D001297 8.5e-08 61.6 86 40.7
PSO210G6127 Papaver somniferum HOM05D001437 ORTHO05D001297 8.5e-08 61.6 67 49.3
Actinidia20344 Actinidia chinensis HOM05D001437 ORTHO05D001297 1.1e-07 61.2 73 45.2
arahy.Tifrunner.gnm1.ann1.73LV1S Arachis hypogaea HOM05D001437 ORTHO05D001297 1.4e-07 60.8 79 43.0
Lj7A646G41 Lonicera japonica HOM05D001437 ORTHO05D001297 1.4e-07 60.8 73 43.8
Peaxi162Scf00560g00513 Petunia axillaris HOM05D001437 ORTHO05D001297 1.4e-07 60.8 82 41.5
Sed0000587 Sechium edule HOM05D001437 ORTHO05D001297 1.4e-07 60.8 85 40.0
TWI32G0814 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 1.4e-07 60.8 74 43.2
ClCG11G002590 Citrullus lanatus HOM05D001437 ORTHO05D001297 1.9e-07 60.5 55 52.7
Os02g0208900 Oryza sativa ssp. japonica HOM05D001437 ORTHO05D001297 1.9e-07 60.5 111 33.3
Potri.018G035000 Populus trichocarpa HOM05D001437 ORTHO05D001297 1.9e-07 60.5 63 50.8
THA.LOC104808754 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 1.9e-07 60.5 58 55.2
DCAR_001495 Daucus carota HOM05D001437 ORTHO05D001297 2.5e-07 60.1 73 38.4
Gohir.A06G060900 Gossypium hirsutum HOM05D001437 ORTHO05D001297 2.5e-07 60.1 73 43.8
arahy.Tifrunner.gnm1.ann1.15P38C Arachis hypogaea HOM05D001437 ORTHO05D001297 3.2e-07 59.7 79 41.8
Cfa013220 Carpinus fangiana HOM05D001437 ORTHO05D001297 3.2e-07 59.7 73 42.5
Gorai.009G012100 Gossypium raimondii HOM05D001437 ORTHO05D001297 4.2e-07 59.3 74 44.6
Oeu027164.1 Olea europaea HOM05D001437 ORTHO05D001297 4.2e-07 59.3 121 32.2
Sc23g0005810 Simmondsia chinensis HOM05D001437 ORTHO05D001297 4.2e-07 59.3 73 39.7
Manes.03G067000 Manihot esculenta HOM05D001437 ORTHO05D001297 5.5e-07 58.9 88 43.2
Potri.018G076200 Populus trichocarpa HOM05D001437 ORTHO05D001297 5.5e-07 58.9 72 40.3
PGSC0003DMG400000322 Solanum tuberosum HOM05D001437 ORTHO05D001297 5.5e-07 58.9 91 40.7
Solyc12g006990.2 Solanum lycopersicum HOM05D001437 ORTHO05D001297 7.2e-07 58.5 91 40.7
Sopen12g002950 Solanum pennellii HOM05D001437 ORTHO05D001297 7.2e-07 58.5 91 40.7
COL.COLO4_24073 Corchorus olitorius HOM05D001437 ORTHO05D001297 1.2e-06 57.8 69 47.8
DCAR_024706 Daucus carota HOM05D001437 ORTHO05D001297 1.2e-06 57.8 80 38.8
DCAR_031958 Daucus carota HOM05D001437 ORTHO05D001297 1.2e-06 57.8 80 38.8
Gohir.D06G059300 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.6e-06 57.4 73 42.5
Gorai.010G069100 Gossypium raimondii HOM05D001437 ORTHO05D001297 1.6e-06 57.4 73 42.5
Atru.chr7.2316 Acer truncatum HOM05D001437 ORTHO05D001297 2.1e-06 57.0 82 39.0
Ciclev10010498m.g Citrus clementina HOM05D001437 ORTHO05D001297 2.1e-06 57.0 77 39.0
Gohir.D08G261400 Gossypium hirsutum HOM05D001437 ORTHO05D001297 2.1e-06 57.0 71 43.7
Oeu045172.1 Olea europaea HOM05D001437 ORTHO05D001297 2.1e-06 57.0 86 37.2
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 2.7e-06 56.6 98 37.8
Haze_21635 Corylus avellana HOM05D001437 ORTHO05D001297 2.7e-06 56.6 74 45.9
Aa31LG8G11170 Aethionema arabicum HOM05D001437 ORTHO05D001297 3.6e-06 56.2 58 48.3
Prupe.1G466000 Prunus persica HOM05D001437 ORTHO05D001297 3.6e-06 56.2 77 40.3
Dinv30523 Davidia involucrata HOM05D001437 ORTHO05D001297 4.6e-06 55.8 57 52.6
Migut.K00462 Erythranthe guttata HOM05D001437 ORTHO05D001297 6.1e-06 55.5 89 36.0
MD15G1188600 Malus domestica HOM05D001437 ORTHO05D001297 6.1e-06 55.5 56 50.0
Sopen08g021840 Solanum pennellii HOM05D001437 ORTHO05D001297 6.1e-06 55.5 63 47.6
TWI34G1393 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 6.1e-06 55.5 86 39.5
Gorai.010G054100 Gossypium raimondii HOM05D001437 ORTHO05D001297 7.9e-06 55.1 130 36.2
Medtr6g086630 Medicago truncatula HOM05D001437 ORTHO05D001297 7.9e-06 55.1 110 34.5
PGSC0003DMG400014483 Solanum tuberosum HOM05D001437 ORTHO05D001297 7.9e-06 55.1 80 40.0
SGA_v2.0_scaffold109G31040 Striga asiatica HOM05D001437 ORTHO05D001297 7.9e-06 55.1 92 35.9


User provided reference genes

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