Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g03785_MAGBIO Magnolia biondii HOM05D007301 ORTHO05D002389 1.3e-200 703.0 393 100.0
TAR623G0342 Trochodendron aralioides HOM05D007301 ORTHO05D002389 2.1e-28 131.0 278 35.6
Sabra11G0025900 Salix brachista HOM05D007301 ORTHO05D002389 2.2e-22 110.9 246 35.4
Potri.011G032700 Populus trichocarpa HOM05D007301 ORTHO05D002389 7.9e-20 102.4 262 34.4
CiPaw.09G153900 Carya illinoinensis HOM05D007301 ORTHO05D002389 1.4e-16 91.7 241 33.2
Migut.M01248 Erythranthe guttata HOM05D007301 ORTHO05D002389 6.9e-16 89.4 75 57.3
Gohir.D06G126100 Gossypium hirsutum HOM05D007301 ORTHO05D002389 2.6e-15 87.4 235 33.2
PSO063G0660 Papaver somniferum HOM05D007301 ORTHO05D002389 4.5e-15 86.7 264 32.6
PSO832G1637 Papaver somniferum HOM05D007301 ORTHO05D002389 5.8e-15 86.3 264 31.8
Gorai.010G147000 Gossypium raimondii HOM05D007301 ORTHO05D002389 1.3e-14 85.1 235 32.8
Prupe.4G030800 Prunus persica HOM05D007301 ORTHO05D002389 4.9e-14 83.2 246 30.1
ATR0068G041 Amborella trichopoda HOM05D004339 ORTHO05D002389 8.4e-14 82.4 262 32.1
Thecc.06G206100 Theobroma cacao HOM05D007301 ORTHO05D002389 4.2e-13 80.1 223 30.9
Cpa.g.sc871.4 Carica papaya HOM05D007301 ORTHO05D002389 9.3e-13 79.0 251 29.9
Glyma.13G250000 Glycine max HOM05D007301 ORTHO05D002389 1.6e-12 78.2 258 30.2
Oeu050575.1 Olea europaea HOM05D007301 ORTHO05D002389 2.1e-12 77.8 262 32.1
CSS0002302 Camellia sinensis var. sinensis HOM05D000603 ORTHO05D002642 1.0e-11 75.5 228 32.9
AUR62014643 Chenopodium quinoa HOM05D007301 ORTHO05D002389 1.0e-11 75.5 291 29.6
Hund13187 Selenicereus undatus HOM05D004339 ORTHO05D002389 1.0e-11 75.5 141 37.6
COL.COLO4_31668 Corchorus olitorius HOM05D000687 ORTHO05D002389 3.9e-11 73.6 218 34.4
Manes.16G015600 Manihot esculenta HOM05D007301 ORTHO05D002389 3.9e-11 73.6 239 29.3
unitig_27.g25344 Utricularia gibba HOM05D007301 ORTHO05D002389 5.1e-11 73.2 60 58.3
CANSAT56G1725 Cannabis sativa HOM05D007301 ORTHO05D002389 1.1e-10 72.0 277 28.9
Aqoxy1G00617 Aquilegia oxysepala HOM05D007301 ORTHO05D002389 1.5e-10 71.6 280 29.6
AUR62012556 Chenopodium quinoa HOM05D007301 ORTHO05D002389 1.5e-10 71.6 270 29.6
Nitab4.5_0003045g0050 Nicotiana tabacum HOM05D007301 ORTHO05D002389 1.9e-10 71.2 274 27.7
Peaxi162Scf00931g00032 Petunia axillaris HOM05D007301 ORTHO05D002389 1.9e-10 71.2 265 28.7
Cc02_g11930 Coffea canephora HOM05D007301 ORTHO05D002389 2.5e-10 70.9 254 29.1
Solyc02g079780.1 Solanum lycopersicum HOM05D007301 ORTHO05D002389 2.5e-10 70.9 58 56.9
TWI63G0057 Tripterygium wilfordii HOM05D007301 ORTHO05D002389 2.5e-10 70.9 265 29.4
AUR62024487 Chenopodium quinoa HOM05D004339 ORTHO05D002389 4.3e-10 70.1 130 37.7
Ca_04851_v3 Cicer arietinum L. HOM05D004339 ORTHO05D002389 4.3e-10 70.1 61 55.7
Atru.chr10.2080 Acer truncatum HOM05D007301 ORTHO05D002389 5.6e-10 69.7 256 29.3
SGA_v2.0_scaffold7G03899 Striga asiatica HOM05D007301 ORTHO05D002389 5.6e-10 69.7 145 37.2
Duzib235G0854 Durio zibethinus HOM05D007301 ORTHO05D002389 9.6e-10 68.9 223 32.3
VMungo0540G0977 Vigna mungo HOM05D007301 ORTHO05D002389 1.3e-09 68.6 248 29.0
Ah.09g236990 Amaranthus hybridus HOM05D007301 ORTHO05D002389 1.6e-09 68.2 316 25.9
BcaB03g13255 Brassica carinata HOM05D007301 ORTHO05D002389 1.6e-09 68.2 91 37.4
QL05p077842 Quercus lobata HOM05D007301 ORTHO05D002389 2.1e-09 67.8 225 32.4
Lalb_Chr15g0090181 Lupinus albus HOM05D007301 ORTHO05D002389 2.8e-09 67.4 246 29.3
Psat1g070960 Pisum sativum HOM05D004339 ORTHO05D002389 2.8e-09 67.4 61 54.1
Cc07_g03620 Coffea canephora HOM05D004339 ORTHO05D002389 3.7e-09 67.0 165 33.9
Haze_06650 Corylus avellana HOM05D007301 ORTHO05D002389 3.7e-09 67.0 271 26.9
Aa31LG2G4120 Aethionema arabicum HOM05D004339 ORTHO05D002389 4.8e-09 66.6 122 36.9
CSS0006568 Camellia sinensis var. sinensis HOM05D004339 ORTHO05D002389 4.8e-09 66.6 64 48.4
CSS0028300 Camellia sinensis var. sinensis HOM05D004339 ORTHO05D002389 4.8e-09 66.6 64 48.4
Glyma.15G064200 Glycine max HOM05D007301 ORTHO05D002389 4.8e-09 66.6 249 30.1
AL7G50740 Arabidopsis lyrata HOM05D004339 ORTHO05D002389 6.2e-09 66.2 140 35.7
FvH4_3g03190 Fragaria vesca HOM05D007301 ORTHO05D002389 8.2e-09 65.9 250 28.0
CAN.G206.175 Capsicum annuum HOM05D004339 ORTHO05D002389 1.1e-08 65.5 63 52.4
Haze_06639 Corylus avellana HOM05D007301 ORTHO05D002389 1.1e-08 65.5 271 26.6
arahy.Tifrunner.gnm1.ann1.1PF2AY Arachis hypogaea HOM05D007301 ORTHO05D002389 1.4e-08 65.1 255 27.8
MELO3C002521.2 Cucumis melo HOM05D007301 ORTHO05D002389 1.4e-08 65.1 259 28.6
Sp1g10080 Schrenkiella parvula HOM05D007301 ORTHO05D002389 1.4e-08 65.1 127 34.6
Sc05g0008310 Simmondsia chinensis HOM05D007301 ORTHO05D002389 1.4e-08 65.1 232 28.9
TPR.G8812 Trifolium pratense HOM05D004339 ORTHO05D002389 1.4e-08 65.1 61 50.8
BcaC07g38666 Brassica carinata HOM05D007301 ORTHO05D002389 1.8e-08 64.7 57 52.6
A06p08080 Brassica napus HOM05D007301 ORTHO05D002389 1.8e-08 64.7 58 51.7
BolC8t49099H Brassica oleracea HOM05D007301 ORTHO05D002389 1.8e-08 64.7 57 52.6
BraA06t24007Z Brassica rapa HOM05D007301 ORTHO05D002389 1.8e-08 64.7 58 51.7
Haze_14501 Corylus avellana HOM05D004339 ORTHO05D002389 1.8e-08 64.7 64 50.0
Solyc02g088260.3 Solanum lycopersicum HOM05D004339 ORTHO05D002389 1.8e-08 64.7 132 34.1
Sopen02g032940 Solanum pennellii HOM05D004339 ORTHO05D002389 1.8e-08 64.7 132 34.1
TAR374G0423 Trochodendron aralioides HOM05D004339 ORTHO05D002389 1.8e-08 64.7 173 34.7
HanXRQChr08g0232051 Helianthus annuus HOM05D007301 ORTHO05D002389 2.4e-08 64.3 37 70.3
Potri.017G087200 Populus trichocarpa HOM05D004339 ORTHO05D002389 2.4e-08 64.3 103 38.8
THA.LOC104809531 Tarenaya hassleriana HOM05D007301 ORTHO05D002389 2.4e-08 64.3 49 57.1
Glyma.13G061100 Glycine max HOM05D004339 ORTHO05D002389 3.1e-08 63.9 63 49.2
Lsat_1_v5_gn_1_123940 Lactuca sativa HOM05D007301 ORTHO05D002389 3.1e-08 63.9 46 63.0
Lj2g0019168 Lotus japonicus HOM05D004339 ORTHO05D002389 3.1e-08 63.9 64 48.4
SEGI_04222 Sequoiadendron giganteum HOM05D004339 ORTHO05D002389 3.1e-08 63.9 103 38.8
ATR0564G373 Amborella trichopoda HOM05D004339 ORTHO05D002389 4.0e-08 63.5 82 43.9
CARHR262720 Cardamine hirsuta HOM05D004339 ORTHO05D002389 4.0e-08 63.5 108 38.9
DCAR_025385 Daucus carota HOM05D004339 ORTHO05D002389 4.0e-08 63.5 70 47.1
ECA248G1972 Erigeron canadensis HOM05D007301 ORTHO05D002389 4.0e-08 63.5 39 64.1
Nitab4.5_0000568g0190 Nicotiana tabacum HOM05D004339 ORTHO05D002389 4.0e-08 63.5 125 36.0
BcaB07g30098 Brassica carinata HOM05D004339 ORTHO05D002389 5.3e-08 63.2 103 39.8
Potri.004G029500 Populus trichocarpa HOM05D007301 ORTHO05D002389 5.3e-08 63.2 52 53.8
Atru.chr10.2079 Acer truncatum HOM05D007301 ORTHO05D002389 6.9e-08 62.8 231 29.0
ECA232G3508 Erigeron canadensis HOM05D004339 ORTHO05D002389 6.9e-08 62.8 111 39.6
Prupe.3G263800 Prunus persica HOM05D004339 ORTHO05D002389 6.9e-08 62.8 64 53.1
PGSC0003DMG400021709 Solanum tuberosum HOM05D007301 ORTHO05D002389 6.9e-08 62.8 254 26.8
Aqoxy7G01875 Aquilegia oxysepala HOM05D004339 ORTHO05D002389 9.0e-08 62.4 161 34.8
Manes.02G048440 Manihot esculenta HOM05D004339 ORTHO05D002389 9.0e-08 62.4 34 73.5
PGSC0003DMG400001431 Solanum tuberosum HOM05D004339 ORTHO05D002389 9.0e-08 62.4 137 32.8
SGA_v2.0_scaffold413G51176 Striga asiatica HOM05D004339 ORTHO05D002389 9.0e-08 62.4 125 40.8
MSTRG.3030 Avicennia marina HOM05D004339 ORTHO05D002389 1.2e-07 62.0 120 36.7
Gohir.A06G122000 Gossypium hirsutum HOM05D007301 ORTHO05D002389 1.2e-07 62.0 127 41.7
MD05G1334500 Malus domestica HOM05D007301 ORTHO05D002389 1.2e-07 62.0 255 29.0
CANSAT64G0152 Cannabis sativa HOM05D004339 ORTHO05D002389 1.5e-07 61.6 127 37.0
Cfa007586 Carpinus fangiana HOM05D004339 ORTHO05D002389 1.5e-07 61.6 65 46.2
Sp7g02420 Schrenkiella parvula HOM05D004339 ORTHO05D002389 1.5e-07 61.6 108 38.0
Cfa000294 Carpinus fangiana HOM05D007301 ORTHO05D002389 2.0e-07 61.2 278 28.1
ECA238G2462 Erigeron canadensis HOM05D004339 ORTHO05D002389 2.0e-07 61.2 107 35.5
Lj6g0023608 Lotus japonicus HOM05D007301 ORTHO05D002389 2.0e-07 61.2 255 29.4
MD09G1054700 Malus domestica HOM05D004339 ORTHO05D002389 2.0e-07 61.2 63 50.8
Medtr6g012780 Medicago truncatula HOM05D004339 ORTHO05D002389 2.0e-07 61.2 92 39.1
Phvul.006G195200 Phaseolus vulgaris HOM05D007301 ORTHO05D002389 2.0e-07 61.2 252 28.2
ClCG10G015320 Citrullus lanatus HOM05D004339 ORTHO05D002389 2.6e-07 60.8 105 39.0
Dinv11507 Davidia involucrata HOM05D004339 ORTHO05D002389 2.6e-07 60.8 148 35.8
Migut.H00679 Erythranthe guttata HOM05D004339 ORTHO05D002389 2.6e-07 60.8 126 36.5
Lalb_Chr02g0159271 Lupinus albus HOM05D004339 ORTHO05D002389 2.6e-07 60.8 63 49.2
SEGI_14355 Sequoiadendron giganteum HOM05D007301 ORTHO05D002389 2.6e-07 60.8 86 40.7
PGSC0003DMG400025147 Solanum tuberosum HOM05D004339 ORTHO05D002389 2.6e-07 60.8 152 32.2
AT1G11440 Arabidopsis thaliana HOM05D007301 ORTHO05D002389 3.4e-07 60.5 38 65.8
ClCG03G005250 Citrullus lanatus HOM05D007301 ORTHO05D002389 3.4e-07 60.5 262 29.0
DCAR_011081 Daucus carota HOM05D004339 ORTHO05D002389 3.4e-07 60.5 35 68.6
Eucgr.E03612 Eucalyptus grandis HOM05D007301 ORTHO05D002389 3.4e-07 60.5 268 30.6
Thhalv10027782m.g Eutrema salsugineum HOM05D004339 ORTHO05D002389 3.4e-07 60.5 108 37.0
Gohir.A09G013500 Gossypium hirsutum HOM05D004339 ORTHO05D002389 3.4e-07 60.5 63 49.2
Sc10g0003440 Simmondsia chinensis HOM05D004339 ORTHO05D002389 3.4e-07 60.5 107 38.3
A06p40150 Brassica napus HOM05D004339 ORTHO05D002389 4.5e-07 60.1 62 45.2
C05p09660 Brassica napus HOM05D007301 ORTHO05D002389 4.5e-07 60.1 57 50.9
BolC5t29707H Brassica oleracea HOM05D007301 ORTHO05D002389 4.5e-07 60.1 57 50.9
BraA06t26930Z Brassica rapa HOM05D004339 ORTHO05D002389 4.5e-07 60.1 62 45.2
CARHR152260 Cardamine hirsuta HOM05D004339 ORTHO05D002389 4.5e-07 60.1 34 67.6
Nitab4.5_0001591g0190 Nicotiana tabacum HOM05D004339 ORTHO05D002389 4.5e-07 60.1 120 37.5
PGR004G0671 Punica granatum HOM05D004339 ORTHO05D002389 4.5e-07 60.1 35 65.7
Actinidia17562 Actinidia chinensis HOM05D004339 ORTHO05D002389 5.8e-07 59.7 177 32.8
AL1G22530 Arabidopsis lyrata HOM05D007301 ORTHO05D002389 5.8e-07 59.7 61 49.2
BcaB02g07977 Brassica carinata HOM05D004339 ORTHO05D002389 5.8e-07 59.7 110 36.4
AUR62026072 Chenopodium quinoa HOM05D004339 ORTHO05D002389 5.8e-07 59.7 132 34.8
COL.COLO4_10350 Corchorus olitorius HOM05D004339 ORTHO05D002389 5.8e-07 59.7 61 49.2
CsaV3_1G011450 Cucumis sativus L. HOM05D007301 ORTHO05D002389 5.8e-07 59.7 52 51.9
Gohir.D09G012100 Gossypium hirsutum HOM05D004339 ORTHO05D002389 5.8e-07 59.7 69 47.8
Manes.01G101300 Manihot esculenta HOM05D004339 ORTHO05D002389 5.8e-07 59.7 34 67.6
Potri.004G127400 Populus trichocarpa HOM05D004339 ORTHO05D002389 5.8e-07 59.7 101 36.6
SHI01989 Sapria himalayana HOM05D004339 ORTHO05D002389 5.8e-07 59.7 123 35.8
Sed0004307 Sechium edule HOM05D004339 ORTHO05D002389 5.8e-07 59.7 115 36.5
Zm00001eb254420 Zea mays HOM05D004339 ORTHO05D002389 5.8e-07 59.7 33 69.7
BcaB04g19502 Brassica carinata HOM05D004339 ORTHO05D002389 7.6e-07 59.3 106 39.6
BcaC05g25022 Brassica carinata HOM05D007301 ORTHO05D002389 7.6e-07 59.3 59 47.5
CAN.G424.85 Capsicum annuum HOM05D007301 ORTHO05D002389 7.6e-07 59.3 120 36.7
DCAR_004167 Daucus carota HOM05D007301 ORTHO05D002389 7.6e-07 59.3 269 28.3
Lsat_1_v5_gn_2_90061 Lactuca sativa HOM05D004339 ORTHO05D002389 7.6e-07 59.3 111 35.1
Lju41A9G72 Lonicera japonica HOM05D004339 ORTHO05D002389 7.6e-07 59.3 106 35.8
Lju41A9T72 Lonicera japonica HOM05D004339 ORTHO05D002389 7.6e-07 59.3 106 38.7
EL10Ac3g07125 Beta vulgaris HOM05D004339 ORTHO05D002389 1.0e-06 58.9 128 35.2
BcaC04g23848 Brassica carinata HOM05D004339 ORTHO05D002389 1.0e-06 58.9 69 44.9
C09p04180 Brassica napus HOM05D004339 ORTHO05D002389 1.0e-06 58.9 69 44.9
BolC9t53349H Brassica oleracea HOM05D004339 ORTHO05D002389 1.0e-06 58.9 69 44.9
Carub.0001s1106 Capsella rubella HOM05D007301 ORTHO05D002389 1.0e-06 58.9 56 48.2
PGR042G3055 Punica granatum HOM05D007301 ORTHO05D002389 1.0e-06 58.9 114 39.5
vmacro18177 Vaccinium macrocarpon HOM05D004339 ORTHO05D002389 1.0e-06 58.9 66 47.0
HPP92_017447 Vanilla planifolia HOM05D004339 ORTHO05D002389 1.0e-06 58.9 139 36.0
BcaC06g30878 Brassica carinata HOM05D004339 ORTHO05D002389 1.3e-06 58.5 142 33.8
A02p36320 Brassica napus HOM05D004339 ORTHO05D002389 1.3e-06 58.5 62 43.5
BraA02t08631Z Brassica rapa HOM05D004339 ORTHO05D002389 1.3e-06 58.5 62 43.5
Ciclev10011817m.g Citrus clementina HOM05D004339 ORTHO05D002389 1.3e-06 58.5 125 37.6
Duzib264G0373 Durio zibethinus HOM05D004339 ORTHO05D002389 1.3e-06 58.5 101 40.6
Hma1.2p1_1191F.1_g265440 Hydrangea macrophylla HOM05D004339 ORTHO05D002389 1.3e-06 58.5 114 33.3
Sabra04G0090600 Salix brachista HOM05D004339 ORTHO05D002389 1.3e-06 58.5 107 36.4
Aa31LG9G16500 Aethionema arabicum HOM05D004339 ORTHO05D002389 1.7e-06 58.2 131 35.1
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 1.7e-06 58.2 123 35.8
MD17G1052800 Malus domestica HOM05D004339 ORTHO05D002389 1.7e-06 58.2 63 47.6
Nitab4.5_0000212g0100 Nicotiana tabacum HOM05D004339 ORTHO05D002389 1.7e-06 58.2 70 42.9
Sopen02g024550 Solanum pennellii HOM05D007301 ORTHO05D002389 1.7e-06 58.2 228 27.6
TWI34G0816 Tripterygium wilfordii HOM05D004339 ORTHO05D002389 1.7e-06 58.2 115 33.9
TWI34G1400 Tripterygium wilfordii HOM05D004339 ORTHO05D002389 1.7e-06 58.2 115 33.9
GSVIVG01011458001 Vitis vinifera HOM05D004339 ORTHO05D002389 1.7e-06 58.2 103 35.0
FAN25G3745 Fragaria x ananassa HOM05D007301 ORTHO05D002389 2.2e-06 57.8 238 28.2
Peaxi162Scf00166g01032 Petunia axillaris HOM05D004339 ORTHO05D002389 2.2e-06 57.8 134 32.8
Rhsim08G0071400 Rhododendron simsii HOM05D004339 ORTHO05D002389 2.2e-06 57.8 157 28.0
BraA09t36033Z Brassica rapa HOM05D004339 ORTHO05D002389 2.9e-06 57.4 108 38.0
FAN02G2477 Fragaria x ananassa HOM05D004339 ORTHO05D002389 2.9e-06 57.4 100 38.0
Glyma.19G025400 Glycine max HOM05D004339 ORTHO05D002389 2.9e-06 57.4 67 44.8
QL02p084787 Quercus lobata HOM05D004339 ORTHO05D002389 2.9e-06 57.4 133 37.6
RcHm_v2.0_Chr2g0167321 Rosa chinensis HOM05D004339 ORTHO05D002389 2.9e-06 57.4 125 36.8
BolC2t11577H Brassica oleracea HOM05D004339 ORTHO05D002389 3.8e-06 57.0 96 35.4
HanXRQChr09g0264261 Helianthus annuus HOM05D004339 ORTHO05D002389 3.8e-06 57.0 156 31.4
HPP92_015352 Vanilla planifolia HOM05D004339 ORTHO05D002389 3.8e-06 57.0 100 34.0
HPP92_017452 Vanilla planifolia HOM05D004339 ORTHO05D002389 3.8e-06 57.0 125 35.2
arahy.Tifrunner.gnm1.ann1.AUQB01 Arachis hypogaea HOM05D004339 ORTHO05D002389 4.9e-06 56.6 123 35.0
FAN25G2425 Fragaria x ananassa HOM05D007301 ORTHO05D002389 4.9e-06 56.6 46 54.3
HanXRQChr14g0448551 Helianthus annuus HOM05D004339 ORTHO05D002389 4.9e-06 56.6 108 33.3
Lsat_1_v5_gn_4_170381 Lactuca sativa HOM05D004339 ORTHO05D002389 4.9e-06 56.6 117 34.2
Thecc.04G087100 Theobroma cacao HOM05D004339 ORTHO05D002389 4.9e-06 56.6 103 37.9
Atru.chr10.2091 Acer truncatum HOM05D007301 ORTHO05D002389 6.5e-06 56.2 211 30.3
CARHR011720 Cardamine hirsuta HOM05D007301 ORTHO05D002389 6.5e-06 56.2 254 29.1
CiPaw.03G023900 Carya illinoinensis HOM05D004339 ORTHO05D002389 6.5e-06 56.2 134 35.1
Dinv18959 Davidia involucrata HOM05D000603 ORTHO05D002642 6.5e-06 56.2 182 29.7
Gohir.A07G206400 Gossypium hirsutum HOM05D004339 ORTHO05D002389 6.5e-06 56.2 98 39.8
MBI02_g14228_MAGBIO Magnolia biondii HOM05D004339 ORTHO05D002389 6.5e-06 56.2 60 43.3
Nn2g15924 Nelumbo nucifera HOM05D007301 ORTHO05D002389 6.5e-06 56.2 257 27.6
VMungo0464G1715 Vigna mungo HOM05D004339 ORTHO05D002389 6.5e-06 56.2 126 34.1
A09p03960 Brassica napus HOM05D004339 ORTHO05D002389 8.4e-06 55.8 101 37.6
GSVIVG01006515001 Vitis vinifera HOM05D007301 ORTHO05D002389 8.4e-06 55.8 236 27.5


User provided reference genes

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