Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 1.9e-119 432.6 221 100.0
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 8.2e-59 231.1 199 60.3
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 4.1e-58 228.8 199 59.8
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.2e-57 227.3 194 58.2
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 4.8e-51 205.3 199 54.3
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 6.3e-51 204.9 204 53.9
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 5.0e-48 195.3 143 66.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.1e-47 194.1 148 68.2
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 1.5e-47 193.7 202 54.0
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 2.5e-47 193.0 220 51.8
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 2.7e-46 189.5 136 64.7
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 6.1e-46 188.3 206 48.1
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 1.5e-44 183.7 200 48.0
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.0e-44 183.3 203 49.3
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 7.5e-44 181.4 152 56.6
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 6.3e-43 178.3 204 47.1
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 2.7e-41 172.9 198 43.4
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.7e-40 170.2 209 47.4
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 2.3e-40 169.9 158 56.3
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 8.6e-40 167.9 192 47.4
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 1.1e-39 167.5 190 48.9
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 1.1e-39 167.5 159 55.3
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.5e-39 167.2 139 56.8
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 1.9e-39 166.8 137 57.7
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 1.9e-39 166.8 145 55.9
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 4.3e-39 165.6 203 50.7
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 7.3e-39 164.9 203 45.3
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 9.5e-39 164.5 204 46.1
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.6e-38 163.7 195 46.2
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 2.8e-38 162.9 204 46.6
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 8.0e-38 161.4 195 45.6
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 8.0e-38 161.4 167 49.7
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.4e-37 160.6 161 54.7
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.8e-37 160.2 138 55.1
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.8e-37 160.2 138 58.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.8e-37 158.3 138 56.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.2e-36 157.5 138 58.7
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 2.0e-36 156.8 138 52.9
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 3.4e-36 156.0 190 47.4
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 3.4e-36 156.0 137 58.4
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 5.7e-36 155.2 141 53.2
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 7.5e-36 154.8 161 53.4
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 7.5e-36 154.8 223 45.3
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 2.9e-35 152.9 141 53.2
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 3.7e-35 152.5 199 43.2
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 3.7e-35 152.5 138 51.4
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 3.7e-35 152.5 138 57.2
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 8.3e-35 151.4 195 45.1
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 8.3e-35 151.4 178 45.5
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.4e-34 150.6 161 49.1
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 1.8e-34 150.2 138 55.1
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 2.4e-34 149.8 156 50.6
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 3.2e-34 149.4 159 50.9
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 3.2e-34 149.4 204 40.7
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 4.1e-34 149.1 153 51.0
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 4.1e-34 149.1 153 51.0
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 4.1e-34 149.1 153 51.0
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.4e-34 148.7 138 55.1
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.2e-33 147.5 167 49.1
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 1.6e-33 147.1 192 47.9
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.6e-33 147.1 194 41.8
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 2.0e-33 146.7 162 48.8
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 7.8e-33 144.8 160 50.0
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 7.8e-33 144.8 160 51.2
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.3e-32 144.1 199 45.2
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.7e-32 143.7 192 43.2
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 6.6e-32 141.7 137 46.7
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 8.6e-32 141.4 135 54.1
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 8.6e-32 141.4 100 62.0
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 2.5e-31 139.8 171 45.0
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 4.3e-31 139.0 167 48.5
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 7.3e-31 138.3 138 52.9
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 9.5e-31 137.9 200 40.5
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 1.2e-30 137.5 104 60.6
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 1.2e-30 137.5 102 61.8
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 1.6e-30 137.1 101 61.4
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.6e-30 137.1 132 55.3
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.6e-30 137.1 132 55.3
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.6e-30 137.1 132 55.3
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 2.1e-30 136.7 137 47.4
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 4.7e-30 135.6 156 50.6
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 4.7e-30 135.6 141 48.2
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 3.1e-29 132.9 197 45.2
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 5.2e-29 132.1 102 59.8
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 1.5e-28 130.6 101 58.4
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 2.0e-28 130.2 162 44.4
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 2.6e-28 129.8 134 50.7
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 2.6e-28 129.8 100 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 5.8e-28 128.6 139 51.8
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 7.5e-28 128.3 161 46.6
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.3e-27 127.5 132 48.5
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 2.2e-27 126.7 159 43.4
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.1e-26 124.4 134 50.7
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 4.1e-26 122.5 156 44.9
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 5.4e-26 122.1 201 41.8
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 2.7e-25 119.8 156 46.2
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 1.3e-24 117.5 169 42.0
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.3e-24 117.5 102 53.9
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 1.9e-23 113.6 143 41.3
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 2.1e-22 110.2 135 44.4
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 2.8e-22 109.8 139 46.8
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 5.2e-21 105.5 123 43.9
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 1.2e-17 94.4 161 36.6
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.6e-17 94.0 77 64.9
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.0e-16 91.3 62 67.7
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 4.3e-15 85.9 73 56.2
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 5.8e-12 75.5 61 55.7
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 9.9e-12 74.7 60 53.3
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 7.1e-10 68.6 81 45.7


User provided reference genes

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