Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 4.5e-72 274.6 152 100.0
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 3.8e-31 138.7 147 59.2
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 8.5e-31 137.5 149 62.4
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.1e-30 137.1 138 68.1
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.5e-30 136.0 138 68.1
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.5e-30 136.0 138 68.1
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 9.4e-30 134.0 146 63.7
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 1.6e-29 133.3 143 62.9
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.6e-29 133.3 160 61.9
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.6e-29 133.3 149 63.1
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 2.1e-29 132.9 157 59.2
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.7e-29 131.7 141 65.2
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 8.0e-29 131.0 141 65.2
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 8.0e-29 131.0 141 65.2
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 1.4e-28 130.2 139 64.7
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 3.0e-28 129.0 155 61.9
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 3.0e-28 129.0 154 61.7
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 6.8e-28 127.9 155 61.3
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 6.8e-28 127.9 155 61.3
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 8.8e-28 127.5 145 62.1
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.5e-27 126.7 148 60.8
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 4.4e-27 125.2 148 58.1
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 5.7e-27 124.8 143 62.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 5.7e-27 124.8 116 67.2
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 7.5e-27 124.4 158 61.4
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 9.8e-27 124.0 142 62.7
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 1.3e-26 123.6 141 61.0
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 2.8e-26 122.5 141 61.7
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 4.8e-26 121.7 105 71.4
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 6.3e-26 121.3 150 58.7
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 6.3e-26 121.3 140 62.1
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 8.3e-26 120.9 141 61.0
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 1.4e-25 120.2 159 56.6
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 1.4e-25 120.2 101 66.3
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 3.1e-25 119.0 158 55.7
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 3.1e-25 119.0 149 57.0
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 3.1e-25 119.0 149 57.0
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 4.1e-25 118.6 150 58.0
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 4.1e-25 118.6 150 59.3
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 5.4e-25 118.2 154 56.5
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 7.0e-25 117.9 147 58.5
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 2.0e-24 116.3 144 56.9
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 2.7e-24 115.9 144 56.2
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.7e-24 115.9 149 55.0
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 2.7e-24 115.9 149 55.0
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 3.5e-24 115.5 157 57.3
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 5.9e-24 114.8 139 59.7
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 1.0e-23 114.0 150 56.0
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 1.3e-23 113.6 174 52.3
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.7e-23 113.2 146 58.2
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.7e-23 113.2 153 57.5
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 2.2e-23 112.8 143 57.3
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 2.2e-23 112.8 144 55.6
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 2.9e-23 112.5 152 53.3
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 5.0e-23 111.7 144 54.9
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.5e-22 110.2 138 58.0
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 1.9e-22 109.8 159 54.7
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 1.9e-22 109.8 149 53.0
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 3.2e-22 109.0 142 54.2
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 3.2e-22 109.0 138 58.0
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 5.5e-22 108.2 149 57.7
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 5.5e-22 108.2 173 46.8
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 9.5e-22 107.5 165 53.3
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 9.5e-22 107.5 141 54.6
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.6e-21 106.7 86 72.1
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 2.1e-21 106.3 165 50.3
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 2.1e-21 106.3 159 56.0
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.1e-21 106.3 168 54.2
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 2.1e-21 106.3 159 56.0
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 2.1e-21 106.3 159 56.0
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.1e-21 106.3 168 54.2
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 2.1e-21 106.3 166 53.0
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 2.1e-21 106.3 150 51.3
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.8e-21 105.9 161 52.8
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.8e-21 105.9 66 84.8
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 4.7e-21 105.1 167 53.3
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 4.7e-21 105.1 148 56.1
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 6.1e-21 104.8 166 50.6
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 6.1e-21 104.8 166 50.6
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 6.1e-21 104.8 99 62.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 6.1e-21 104.8 99 62.6
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 8.0e-21 104.4 168 51.2
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 8.0e-21 104.4 144 55.6
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.0e-20 104.0 165 51.5
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.4e-20 103.6 140 54.3
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-20 103.6 155 54.2
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 2.3e-20 102.8 164 51.8
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 3.0e-20 102.4 141 52.5
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 3.0e-20 102.4 161 50.3
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 4.0e-20 102.1 168 50.6
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 4.0e-20 102.1 168 50.6
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 6.8e-20 101.3 168 50.0
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 8.8e-20 100.9 157 52.9
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 1.5e-19 100.1 65 84.6
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 2.0e-19 99.8 143 54.5
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 2.0e-19 99.8 84 71.4
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 2.6e-19 99.4 151 53.6
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 3.4e-19 99.0 139 54.0
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 5.7e-19 98.2 141 55.3
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 7.5e-19 97.8 144 54.9
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 9.8e-19 97.4 157 51.6
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 9.8e-19 97.4 146 52.1
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 4.9e-18 95.1 77 72.7
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 1.1e-17 94.0 85 64.7
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 2.4e-17 92.8 133 53.4
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 2.4e-17 92.8 153 51.0
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 3.1e-17 92.4 148 52.0
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 3.1e-17 92.4 143 50.3
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 7.0e-17 91.3 66 77.3
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 4.5e-16 88.6 163 48.5
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 5.9e-16 88.2 147 53.1
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.0e-15 87.4 161 49.1
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 1.3e-15 87.0 105 54.3
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.3e-15 87.0 143 48.3
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 1.7e-15 86.7 108 57.4
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 1.1e-14 84.0 143 48.3
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 9.5e-14 80.9 82 61.0
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.2e-13 80.5 141 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 8.0e-13 77.8 105 54.3
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 3.0e-12 75.9 54 74.1
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 4.0e-12 75.5 134 47.0
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.5e-11 73.6 59 71.2
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 2.6e-11 72.8 144 44.4
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 4.4e-11 72.0 138 47.8
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 2.2e-10 69.7 119 50.4
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.9e-10 69.3 106 52.8
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.4e-09 67.0 146 44.5
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 4.3e-06 55.5 46 65.2


User provided reference genes

Program Settings