Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.4e-82 307.4 156 100.0
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.4e-57 226.5 139 87.1
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.0e-40 167.9 98 88.8
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.0e-39 167.2 91 94.5
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.3e-39 166.8 91 94.5
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-38 163.7 91 92.3
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.4e-31 140.2 90 83.3
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.8e-20 103.2 107 52.3
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 4.5e-19 98.6 116 42.2
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 7.7e-19 97.8 91 57.1
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 7.7e-19 97.8 103 53.4
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 2.2e-18 96.3 91 53.8
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 3.8e-18 95.5 108 48.1
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 5.0e-18 95.1 91 53.8
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 1.9e-17 93.2 122 42.6
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.9e-17 93.2 92 53.3
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 1.2e-16 90.5 116 44.8
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 3.6e-16 89.0 104 45.2
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 4.7e-16 88.6 107 48.6
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 1.4e-15 87.0 92 46.7
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.8e-15 86.7 91 49.5
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 3.0e-15 85.9 108 41.7
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 5.2e-15 85.1 111 39.6
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 8.8e-15 84.3 108 43.5
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 2.6e-14 82.8 116 41.4
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 4.4e-14 82.0 108 40.7
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 4.4e-14 82.0 104 43.3
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 4.4e-14 82.0 91 46.2
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 3.7e-13 79.0 108 41.7
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 3.7e-13 79.0 91 40.7
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 8.2e-13 77.8 116 37.1
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 8.2e-13 77.8 116 36.2
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 1.1e-12 77.4 116 40.5
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.1e-12 77.4 116 35.3
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 1.8e-12 76.6 78 52.6
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 1.8e-12 76.6 108 35.2
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 2.4e-12 76.3 72 50.0
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 3.1e-12 75.9 108 40.7
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 3.1e-12 75.9 72 48.6
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 4.1e-12 75.5 108 38.0
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 5.3e-12 75.1 108 38.0
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 5.3e-12 75.1 99 38.4
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 7.0e-12 74.7 104 45.2
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 7.0e-12 74.7 104 45.2
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 7.0e-12 74.7 83 43.4
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 9.1e-12 74.3 116 35.3
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 1.2e-11 73.9 116 37.1
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.6e-11 73.6 104 45.2
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 1.6e-11 73.6 78 51.3
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 1.6e-11 73.6 108 37.0
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 3.5e-11 72.4 134 35.1
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 3.5e-11 72.4 108 38.9
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 4.5e-11 72.0 80 47.5
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 4.5e-11 72.0 116 38.8
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 4.5e-11 72.0 109 36.7
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 4.5e-11 72.0 109 34.9
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 5.9e-11 71.6 80 50.0
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 7.7e-11 71.2 108 38.0
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.7e-11 71.2 75 42.7
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.7e-11 71.2 75 42.7
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 1.3e-10 70.5 108 37.0
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 1.3e-10 70.5 116 32.8
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 1.7e-10 70.1 75 48.0
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.7e-10 70.1 94 40.4
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 2.2e-10 69.7 71 46.5
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 2.2e-10 69.7 116 40.5
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 2.2e-10 69.7 116 33.6
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 2.9e-10 69.3 102 44.1
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 3.8e-10 68.9 108 33.3
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 3.8e-10 68.9 84 41.7
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 3.8e-10 68.9 116 37.1
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 8.5e-10 67.8 91 38.5
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 1.1e-09 67.4 134 36.6
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.1e-09 67.4 75 44.0
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 2.5e-09 66.2 81 38.3
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 4.2e-09 65.5 99 32.3
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 9.4e-09 64.3 80 40.0
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 2.1e-08 63.2 78 41.0
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.7e-08 62.8 99 36.4
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 2.7e-08 62.8 73 42.5
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 4.7e-08 62.0 117 35.9
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 4.7e-08 62.0 99 30.3
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 4.7e-08 62.0 74 43.2
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 6.1e-08 61.6 71 45.1
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 6.1e-08 61.6 99 32.3
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 8.0e-08 61.2 71 45.1
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 1.4e-07 60.5 83 34.9
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 4.0e-07 58.9 93 35.5
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 6.7e-07 58.2 99 30.3
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 6.7e-07 58.2 99 30.3
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 6.7e-07 58.2 145 29.0
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 6.7e-07 58.2 75 37.3
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 8.8e-07 57.8 99 31.3
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 2.0e-06 56.6 92 37.0
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.0e-06 56.6 75 37.3
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.0e-06 56.6 75 37.3
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 2.0e-06 56.6 90 37.8
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 2.6e-06 56.2 85 32.9
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 3.3e-06 55.8 89 37.1
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 3.3e-06 55.8 89 37.1
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 5.7e-06 55.1 83 31.3
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 7.5e-06 54.7 109 30.3


User provided reference genes

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