Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g40663_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 2.7e-205 718.4 353 100.0
MBI12_g45456_MAGBIO Magnolia biondii HOM05D002695 ORTHO05D010614 1.5e-41 174.5 214 53.7
MBI08_g21301_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 1.1e-33 148.3 106 69.8
MBI15_g14073_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 9.8e-30 135.2 106 56.6
MBI10_g19613_MAGBIO Magnolia biondii HOM05D002695 ORTHO05D002964 3.9e-26 123.2 79 86.1
MBI18_g12421_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 1.5e-25 121.3 93 60.2
MBI17_g29796_MAGBIO Magnolia biondii HOM05D002695 ORTHO05D002964 2.5e-25 120.6 78 83.3
MBI15_g14071_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 3.6e-24 116.7 101 52.5
MBI06_g27484_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 1.4e-20 104.8 104 42.3
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 2.7e-19 100.5 157 41.4
MBI18_g45106_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 6.6e-18 95.9 108 38.9
MBI15_g32305_MAGBIO Magnolia biondii HOM05D002695 ORTHO05D002964 6.2e-16 89.4 64 81.2
MBI10_g35508_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 1.7e-13 81.3 54 83.3
Dinv18162 Davidia involucrata HOM05D000590 ORTHO05D009145 1.4e-12 78.2 108 44.4
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 2.4e-12 77.4 142 36.6
GSVIVG01035925001 Vitis vinifera HOM05D000590 ORTHO05D009145 1.2e-11 75.1 118 42.4
MBI05_g05140_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 1.0e-10 72.0 98 32.7
Atru.chr7.2494 Acer truncatum HOM05D000590 ORTHO05D009145 3.0e-10 70.5 118 42.4
Hma1.2p1_1339F.1_g276610 Hydrangea macrophylla HOM05D002695 ORTHO05D002964 3.9e-10 70.1 61 62.3
Dinv30618 Davidia involucrata HOM05D002695 ORTHO05D002964 6.6e-10 69.3 61 63.9
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 1.1e-09 68.6 100 40.0
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 1.5e-09 68.2 106 40.6
Lj1C756G2 Lonicera japonica HOM05D002695 ORTHO05D002964 2.5e-09 67.4 67 58.2
Lj7A728T60 Lonicera japonica HOM05D000590 ORTHO05D009145 2.5e-09 67.4 108 38.9
Rhsim08G0212100 Rhododendron simsii HOM05D002695 ORTHO05D002964 2.5e-09 67.4 81 49.4
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 4.3e-09 66.6 107 41.1
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 4.3e-09 66.6 109 44.0
Ciclev10010345m.g Citrus clementina HOM05D000590 ORTHO05D009145 5.6e-09 66.2 118 40.7
GSVIVG01017363001 Vitis vinifera HOM05D002695 ORTHO05D002964 5.6e-09 66.2 61 63.9
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 9.6e-09 65.5 106 40.6
Medtr2g104070 Medicago truncatula HOM05D002695 ORTHO05D002964 9.6e-09 65.5 64 59.4
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 1.2e-08 65.1 78 48.7
Psat5g303240 Pisum sativum HOM05D002695 ORTHO05D002964 1.2e-08 65.1 64 59.4
CSS0040579 Camellia sinensis var. sinensis HOM05D002695 ORTHO05D002964 1.6e-08 64.7 61 60.7
Cfa001951 Carpinus fangiana HOM05D002695 ORTHO05D002964 1.6e-08 64.7 61 57.4
Lj3g0003229 Lotus japonicus HOM05D002695 ORTHO05D002964 1.6e-08 64.7 64 59.4
Nn8g40760 Nelumbo nucifera HOM05D002695 ORTHO05D002964 1.6e-08 64.7 61 63.9
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 1.6e-08 64.7 99 38.4
TPR.G37279 Trifolium pratense HOM05D002695 ORTHO05D002964 2.1e-08 64.3 64 57.8
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 2.8e-08 63.9 140 31.4
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 2.8e-08 63.9 112 39.3
Oeu056068.1 Olea europaea HOM05D002695 ORTHO05D002964 2.8e-08 63.9 82 50.0
CiPaw.01G249300 Carya illinoinensis HOM05D002695 ORTHO05D002964 3.6e-08 63.5 61 57.4
CiPaw.02G157900 Carya illinoinensis HOM05D002695 ORTHO05D002964 3.6e-08 63.5 64 56.2
MD17G1213900 Malus domestica HOM05D002695 ORTHO05D002964 6.2e-08 62.8 61 55.7
Manes.04G111600 Manihot esculenta HOM05D002695 ORTHO05D002964 6.2e-08 62.8 61 55.7
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 6.2e-08 62.8 140 35.0
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 8.1e-08 62.4 64 60.9
Sc10g0006020 Simmondsia chinensis HOM05D002695 ORTHO05D002964 1.1e-07 62.0 61 57.4
TWI12G0825 Tripterygium wilfordii HOM05D002695 ORTHO05D002964 1.1e-07 62.0 62 54.8
Cpa.g.sc167.2 Carica papaya HOM05D002695 ORTHO05D002964 1.4e-07 61.6 85 48.2
SalBow2G2196 Salvia bowleyana HOM05D002695 ORTHO05D002964 1.4e-07 61.6 61 59.0
Thecc.06G030300 Theobroma cacao HOM05D002695 ORTHO05D002964 1.8e-07 61.2 61 57.4
Actinidia15751 Actinidia chinensis HOM05D002695 ORTHO05D002964 2.4e-07 60.8 61 52.5
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 2.4e-07 60.8 112 38.4
Cfa013131 Carpinus fangiana HOM05D002695 ORTHO05D002964 3.1e-07 60.5 60 58.3
Ca_01050_v3 Cicer arietinum L. HOM05D002695 ORTHO05D002964 3.1e-07 60.5 64 56.2
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 3.1e-07 60.5 88 40.9
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 3.1e-07 60.5 118 38.1
CDE03G0280 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 4.0e-07 60.1 64 57.8
TAR636G3025 Trochodendron aralioides HOM05D002695 ORTHO05D002964 4.0e-07 60.1 61 57.4
Haze_16574 Corylus avellana HOM05D002695 ORTHO05D002964 5.2e-07 59.7 61 55.7
Glyma.13G366600 Glycine max HOM05D002695 ORTHO05D002964 5.2e-07 59.7 64 53.1
Prupe.3G089800 Prunus persica HOM05D002695 ORTHO05D002964 5.2e-07 59.7 61 54.1
QL05p030652 Quercus lobata HOM05D002695 ORTHO05D002964 5.2e-07 59.7 61 52.5
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 5.2e-07 59.7 137 35.0
Dinv18209 Davidia involucrata HOM05D002695 ORTHO05D002964 6.9e-07 59.3 60 55.0
MBI15_g23572_MAGBIO Magnolia biondii HOM05D009592 ORTHO05D010614 6.9e-07 59.3 73 38.4
Lj5g0010657 Lotus japonicus HOM05D000590 ORTHO05D009145 9.0e-07 58.9 164 29.3
VMungo1080G0605 Vigna mungo HOM05D002695 ORTHO05D002964 9.0e-07 58.9 64 53.1
FvH4_6g29460 Fragaria vesca HOM05D002695 ORTHO05D002964 1.2e-06 58.5 61 55.7
FAN05G1325 Fragaria x ananassa HOM05D002695 ORTHO05D002964 1.2e-06 58.5 61 55.7
FAN09G0304 Fragaria x ananassa HOM05D002695 ORTHO05D002964 1.2e-06 58.5 61 55.7
FAN14G2212 Fragaria x ananassa HOM05D002695 ORTHO05D002964 1.2e-06 58.5 61 55.7
RcHm_v2.0_Chr2g0134961 Rosa chinensis HOM05D002695 ORTHO05D002964 1.2e-06 58.5 61 54.1
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 1.2e-06 58.5 156 32.1
FAN02G0115 Fragaria x ananassa HOM05D002695 ORTHO05D002964 1.5e-06 58.2 61 54.1
Dinv08630 Davidia involucrata HOM05D002695 ORTHO05D002964 2.0e-06 57.8 60 53.3
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 2.0e-06 57.8 70 45.7
Eucgr.F03886 Eucalyptus grandis HOM05D002695 ORTHO05D002964 2.6e-06 57.4 61 57.4
GSVIVG01035873001 Vitis vinifera HOM05D002695 ORTHO05D002964 2.6e-06 57.4 61 54.1
Atru.chr1.2893 Acer truncatum HOM05D002695 ORTHO05D002964 3.4e-06 57.0 64 50.0
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 3.4e-06 57.0 158 29.7
Eucgr.F03888 Eucalyptus grandis HOM05D002695 ORTHO05D002964 3.4e-06 57.0 61 55.7
Duzib160G0818 Durio zibethinus HOM05D002695 ORTHO05D002964 4.4e-06 56.6 74 48.6
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 4.4e-06 56.6 71 45.1
Sc06g0000480 Simmondsia chinensis HOM05D000590 ORTHO05D009145 4.4e-06 56.6 97 38.1
EL10Ac9g21881 Beta vulgaris HOM05D002695 ORTHO05D002964 7.6e-06 55.8 78 47.4
COL.COLO4_18904 Corchorus olitorius HOM05D000590 ORTHO05D009145 7.6e-06 55.8 115 33.9
Duzib192G0949 Durio zibethinus HOM05D002695 ORTHO05D002964 7.6e-06 55.8 56 58.9
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 7.6e-06 55.8 134 32.1
PSO210G7357 Papaver somniferum HOM05D002695 ORTHO05D002964 7.6e-06 55.8 61 54.1
Gohir.A10G072900 Gossypium hirsutum HOM05D002695 ORTHO05D002964 9.9e-06 55.5 51 60.8
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 9.9e-06 55.5 111 34.2


User provided reference genes

Program Settings