Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g39583_MAGBIO Magnolia biondii HOM05D000883 ORTHO05D008470 2.6e-91 338.6 155 100.0
MBI18_g21560_MAGBIO Magnolia biondii HOM05D000883 ORTHO05D008470 6.1e-16 88.2 43 88.4
Hund11468 Selenicereus undatus HOM05D000883 ORTHO05D008470 3.0e-15 85.9 55 67.3
TAR374G0271 Trochodendron aralioides HOM05D000883 ORTHO05D008470 3.0e-15 85.9 43 86.0
HPP92_015170 Vanilla planifolia HOM05D000883 ORTHO05D008470 6.7e-15 84.7 49 75.5
Haze_08833 Corylus avellana HOM05D000883 ORTHO05D008470 1.9e-14 83.2 43 81.4
VMungo0251G1923 Vigna mungo HOM05D000883 ORTHO05D008470 2.5e-14 82.8 44 79.5
Migut.A00763 Erythranthe guttata HOM05D000883 ORTHO05D008470 3.3e-14 82.4 43 81.4
TAR375G0473 Trochodendron aralioides HOM05D000141 ORTHO05D001860 3.3e-14 82.4 43 81.4
Ca_17532_v3 Cicer arietinum L. HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 81.4
Gohir.A09G192300 Gossypium hirsutum HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 79.1
Gohir.D09G186500 Gossypium hirsutum HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 79.1
Gorai.006G209300 Gossypium raimondii HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 79.1
Medtr8g098240 Medicago truncatula HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 81.4
Potri.003G127600 Populus trichocarpa HOM05D000883 ORTHO05D008470 4.3e-14 82.0 43 79.1
Glyma.05G208000 Glycine max HOM05D000883 ORTHO05D008470 5.7e-14 81.6 43 81.4
Psat7g033160 Pisum sativum HOM05D000883 ORTHO05D008470 5.7e-14 81.6 43 79.1
Prupe.5G100200 Prunus persica HOM05D000883 ORTHO05D008470 5.7e-14 81.6 43 81.4
Sabra03G0090800 Salix brachista HOM05D000883 ORTHO05D008470 5.7e-14 81.6 43 76.7
Aqoxy7G00323 Aquilegia oxysepala HOM05D000883 ORTHO05D008470 7.4e-14 81.3 43 76.7
CiPaw.11G135300 Carya illinoinensis HOM05D000883 ORTHO05D008470 7.4e-14 81.3 43 81.4
Nn6g33440 Nelumbo nucifera HOM05D000883 ORTHO05D008470 7.4e-14 81.3 43 79.1
CAN.G774.41 Capsicum annuum HOM05D000883 ORTHO05D008470 9.7e-14 80.9 43 81.4
Dinv38943 Davidia involucrata HOM05D000141 ORTHO05D001860 9.7e-14 80.9 43 81.4
Peaxi162Scf00119g00945 Petunia axillaris HOM05D000883 ORTHO05D008470 9.7e-14 80.9 43 79.1
Peaxi162Scf00147g00176 Petunia axillaris HOM05D000883 ORTHO05D008470 9.7e-14 80.9 43 79.1
PGSC0003DMG400012208 Solanum tuberosum HOM05D000883 ORTHO05D008470 9.7e-14 80.9 43 81.4
Thecc.03G278800 Theobroma cacao HOM05D000883 ORTHO05D008470 9.7e-14 80.9 43 79.1
Cpa.g.sc74.52 Carica papaya HOM05D000883 ORTHO05D008470 1.3e-13 80.5 44 77.3
ECA233G4152 Erigeron canadensis HOM05D000883 ORTHO05D008470 1.6e-13 80.1 43 76.7
Glyma.08G014700 Glycine max HOM05D000883 ORTHO05D008470 1.6e-13 80.1 43 81.4
HanXRQChr07g0189851 Helianthus annuus HOM05D000883 ORTHO05D008470 1.6e-13 80.1 43 76.7
MD06G1083100 Malus domestica HOM05D000883 ORTHO05D008470 1.6e-13 80.1 43 79.1
Atru.chr9.2189 Acer truncatum HOM05D000883 ORTHO05D008470 2.2e-13 79.7 43 76.7
CSS0003376 Camellia sinensis var. sinensis HOM05D000883 ORTHO05D008470 2.2e-13 79.7 43 76.7
CSS0021014 Camellia sinensis var. sinensis HOM05D000883 ORTHO05D008470 2.2e-13 79.7 43 76.7
COL.COLO4_34463 Corchorus olitorius HOM05D000883 ORTHO05D008470 2.2e-13 79.7 43 76.7
EL10Ac5g13062 Beta vulgaris HOM05D000883 ORTHO05D008470 2.8e-13 79.3 43 79.1
Lalb_Chr16g0389991 Lupinus albus HOM05D000883 ORTHO05D008470 2.8e-13 79.3 43 76.7
Rhsim02G0231300 Rhododendron simsii HOM05D000883 ORTHO05D008470 2.8e-13 79.3 43 79.1
Ah.12g056900 Amaranthus hybridus HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 79.1
Ciclev10019111m.g Citrus clementina HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 76.7
Duzib084G0727 Durio zibethinus HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 79.1
Manes.01G060700 Manihot esculenta HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 76.7
Os02g0665200 Oryza sativa ssp. japonica HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 79.1
Sc01g0009570 Simmondsia chinensis HOM05D000883 ORTHO05D008470 3.7e-13 79.0 43 79.1
QL12p033060 Quercus lobata HOM05D000883 ORTHO05D008470 4.8e-13 78.6 43 76.7
SGA_v2.0_scaffold173G39186 Striga asiatica HOM05D000883 ORTHO05D008470 4.8e-13 78.6 43 76.7
TPR.G12783 Trifolium pratense HOM05D000883 ORTHO05D008470 4.8e-13 78.6 43 79.1
PSO782G1513 Papaver somniferum HOM05D000883 ORTHO05D008470 6.3e-13 78.2 43 79.1
vmacro11334 Vaccinium macrocarpon HOM05D000883 ORTHO05D008470 6.3e-13 78.2 43 79.1
AUR62010681 Chenopodium quinoa HOM05D000883 ORTHO05D008470 8.2e-13 77.8 43 79.1
AUR62017201 Chenopodium quinoa HOM05D000883 ORTHO05D008470 8.2e-13 77.8 43 79.1
Eucgr.E00597 Eucalyptus grandis HOM05D000883 ORTHO05D008470 8.2e-13 77.8 43 76.7
PGR042G3209 Punica granatum HOM05D000883 ORTHO05D008470 8.2e-13 77.8 43 74.4
GSVIVG01019754001 Vitis vinifera HOM05D000883 ORTHO05D008470 8.2e-13 77.8 43 76.7
FAN04G0265 Fragaria x ananassa HOM05D000883 ORTHO05D008470 1.1e-12 77.4 43 76.7
FAN08G2773 Fragaria x ananassa HOM05D000883 ORTHO05D008470 1.1e-12 77.4 43 76.7
RcHm_v2.0_Chr7g0197691 Rosa chinensis HOM05D000883 ORTHO05D008470 1.1e-12 77.4 43 76.7
Cc08_g14750 Coffea canephora HOM05D000883 ORTHO05D008470 1.4e-12 77.0 43 76.7
Solyc08g081070.3 Solanum lycopersicum HOM05D000883 ORTHO05D008470 1.4e-12 77.0 43 79.1
Sopen08g029390 Solanum pennellii HOM05D000883 ORTHO05D008470 1.4e-12 77.0 43 79.1
arahy.Tifrunner.gnm1.ann1.3KPW58 Arachis hypogaea HOM05D000883 ORTHO05D008470 1.8e-12 76.6 43 76.7
MSTRG.25608 Avicennia marina HOM05D000883 ORTHO05D008470 2.4e-12 76.3 42 78.6
Lsat_1_v5_gn_6_6541 Lactuca sativa HOM05D000883 ORTHO05D008470 2.4e-12 76.3 60 58.3
FvH4_5g02410 Fragaria vesca HOM05D000883 ORTHO05D008470 3.1e-12 75.9 43 76.7
FAN18G1393 Fragaria x ananassa HOM05D000883 ORTHO05D008470 3.1e-12 75.9 43 76.7
Oeu009156.1 Olea europaea HOM05D000883 ORTHO05D008470 4.1e-12 75.5 43 74.4
Phvul.002G289600 Phaseolus vulgaris HOM05D000883 ORTHO05D008470 4.1e-12 75.5 43 76.7
CANSAT21G1555 Cannabis sativa HOM05D000883 ORTHO05D008470 5.3e-12 75.1 43 74.4
CANSAT21G1792 Cannabis sativa HOM05D000883 ORTHO05D008470 5.3e-12 75.1 43 74.4
Sed0006846 Sechium edule HOM05D000883 ORTHO05D008470 6.9e-12 74.7 42 76.2
Actinidia14562 Actinidia chinensis HOM05D000883 ORTHO05D008470 1.2e-11 73.9 41 80.5
PSO478G3026 Papaver somniferum HOM05D000883 ORTHO05D008470 1.2e-11 73.9 43 74.4
CsaV3_5G002800 Cucumis sativus L. HOM05D000883 ORTHO05D008470 2.0e-11 73.2 42 73.8
ATR0680G152 Amborella trichopoda HOM05D000883 ORTHO05D008470 2.6e-11 72.8 41 75.6
ClCG01G002700 Citrullus lanatus HOM05D000883 ORTHO05D008470 2.6e-11 72.8 42 73.8
Actinidia02005 Actinidia chinensis HOM05D000883 ORTHO05D008470 4.5e-11 72.0 41 80.5
AT4G11440 Arabidopsis thaliana HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 74.4
BcaB05g23827 Brassica carinata HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
BcaC03g16351 Brassica carinata HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
A02p26250 Brassica napus HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
C02p41750 Brassica napus HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
BolC2t10191H Brassica oleracea HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
BraA02t07626Z Brassica rapa HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 72.1
Lj4g0009030 Lotus japonicus HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 74.4
THA.LOC104806407 Tarenaya hassleriana HOM05D000883 ORTHO05D008470 5.9e-11 71.6 43 69.8
TWI15G0376 Tripterygium wilfordii HOM05D000883 ORTHO05D008470 7.7e-11 71.2 43 67.4
Carub.0006s3037 Capsella rubella HOM05D000883 ORTHO05D008470 1.3e-10 70.5 43 72.1
SMO273G0005 Selaginella moellendorffii HOM05D000883 ORTHO05D008470 1.3e-10 70.5 49 63.3
SEGI_05823 Sequoiadendron giganteum HOM05D000883 ORTHO05D008470 1.3e-10 70.5 43 69.8
AL6G45880 Arabidopsis lyrata HOM05D000883 ORTHO05D008470 1.7e-10 70.1 43 72.1
CARHR255110 Cardamine hirsuta HOM05D000883 ORTHO05D008470 1.7e-10 70.1 43 69.8
Aa31LG9G10790 Aethionema arabicum HOM05D000883 ORTHO05D008470 2.2e-10 69.7 45 68.9
Thhalv10028506m.g Eutrema salsugineum HOM05D000883 ORTHO05D008470 2.2e-10 69.7 43 69.8
Sp6g06000 Schrenkiella parvula HOM05D000883 ORTHO05D008470 2.9e-10 69.3 43 67.4
SMO147G0434 Selaginella moellendorffii HOM05D000883 ORTHO05D008470 2.9e-10 69.3 42 69.0
CBR_g32117 Chara braunii HOM05D000883 ORTHO05D008470 9.4e-09 64.3 43 60.5
DCAR_006740 Daucus carota HOM05D000883 ORTHO05D008470 9.4e-09 64.3 43 67.4
FAN13G0852 Fragaria x ananassa HOM05D000883 ORTHO05D008470 2.5e-06 56.2 30 80.0
MELO3C005677.2 Cucumis melo HOM05D000883 ORTHO05D008470 4.3e-06 55.5 33 75.8
Zm00001eb186850 Zea mays HOM05D000883 ORTHO05D008470 5.7e-06 55.1 33 72.7
Pp3c18_13120 Physcomitrium patens HOM05D000883 ORTHO05D008470 7.4e-06 54.7 39 59.0


User provided reference genes

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