Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 5.9e-194 680.6 334 100.0
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.7e-112 408.3 348 61.8
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 7.4e-112 407.9 324 63.3
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 3.7e-111 405.6 254 74.4
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 3.1e-110 402.5 262 72.5
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.6e-109 400.2 260 71.2
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.6e-109 399.4 253 73.9
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 4.5e-109 398.7 255 72.9
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.2e-108 396.4 260 70.4
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 2.9e-108 396.0 254 72.8
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 2.9e-108 396.0 257 72.0
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.1e-107 394.0 269 69.9
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.5e-107 392.9 317 62.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.5e-107 392.9 317 62.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 2.5e-107 392.9 260 70.0
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 3.2e-107 392.5 260 69.6
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 5.5e-107 391.7 270 69.6
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 1.6e-106 390.2 261 69.7
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 2.1e-106 389.8 280 67.1
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 2.7e-106 389.4 254 69.3
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.7e-106 389.4 315 61.6
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 3.6e-106 389.0 252 71.8
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 4.7e-106 388.7 256 70.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 4.7e-106 388.7 254 71.3
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 4.7e-106 388.7 279 68.5
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 8.0e-106 387.9 276 65.6
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 8.0e-106 387.9 315 61.3
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 8.0e-106 387.9 257 70.4
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 8.0e-106 387.9 262 70.6
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.0e-105 387.5 295 64.1
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 1.4e-105 387.1 279 66.7
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 5.2e-105 385.2 253 70.4
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.5e-104 383.6 247 71.7
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.0e-104 383.3 252 70.2
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 3.3e-104 382.5 252 69.0
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 3.3e-104 382.5 247 71.3
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 7.5e-104 381.3 254 70.5
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.2e-103 379.8 279 63.8
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.7e-103 379.0 247 70.9
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 3.7e-103 379.0 251 72.1
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 6.3e-103 378.3 247 70.9
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 6.3e-103 378.3 248 71.8
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 8.2e-103 377.9 264 69.3
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 8.2e-103 377.9 251 71.3
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.1e-102 377.5 329 58.1
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.1e-102 377.5 296 61.1
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 1.1e-102 377.5 240 72.9
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.1e-102 377.5 246 69.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 1.4e-102 377.1 249 69.5
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.4e-102 377.1 286 64.0
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.8e-102 376.7 339 57.5
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 4.1e-102 375.6 254 70.1
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.3e-102 375.2 244 69.7
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.3e-102 375.2 244 69.7
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.3e-102 375.2 244 69.7
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 7.0e-102 374.8 286 62.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 7.0e-102 374.8 328 57.3
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.2e-101 374.0 277 63.9
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.6e-101 373.6 277 64.6
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.0e-101 373.2 225 76.4
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 2.7e-101 372.9 277 63.5
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 7.7e-101 371.3 250 68.8
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 5.0e-100 368.6 355 53.8
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 8.5e-100 367.9 316 57.9
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.5e-99 367.1 278 64.4
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 5.5e-99 365.2 252 69.0
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 1.2e-98 364.0 259 64.1
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.6e-98 363.6 252 64.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 2.7e-98 362.8 252 65.5
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 3.6e-98 362.5 252 64.3
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 3.0e-97 359.4 273 62.3
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 3.0e-97 359.4 245 66.5
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 2.0e-96 356.7 281 61.6
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.6e-96 356.3 249 68.3
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.3e-95 354.0 262 64.1
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 2.8e-95 352.8 226 71.2
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.1e-94 350.9 283 60.1
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 2.9e-92 342.8 219 72.1
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 3.8e-92 342.4 223 70.0
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 5.9e-85 318.5 260 61.9
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 1.5e-83 313.9 279 55.6
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.5e-83 313.2 319 51.4
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 5.7e-80 302.0 307 51.5
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 2.2e-79 300.1 255 57.6
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 4.9e-79 298.9 254 57.9
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.1e-78 297.7 224 61.6
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.8e-78 297.0 231 61.0
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.8e-78 297.0 231 61.0
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 7.0e-78 295.0 206 67.0
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 4.3e-75 285.8 184 72.3
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 2.1e-74 283.5 207 63.8
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 3.6e-74 282.7 184 70.7
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 5.8e-72 275.4 246 52.8
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.7e-71 273.9 190 67.9
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.9e-71 272.3 256 49.6
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 9.2e-70 268.1 182 70.9
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.0e-69 266.9 256 56.6
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 3.6e-66 256.1 170 69.4
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 8.1e-66 255.0 194 63.4
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 1.4e-65 254.2 164 70.1
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 6.0e-61 238.8 221 52.5
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 2.3e-52 210.3 195 55.9
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 3.6e-50 203.0 182 58.2
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 8.9e-49 198.4 295 41.4
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 8.9e-49 198.4 295 41.4
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 9.9e-48 194.9 207 53.6
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.5e-43 181.0 131 65.6
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.8e-42 176.0 131 64.1
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 5.8e-40 169.1 254 37.0
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.2e-38 162.9 131 61.8
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 6.2e-34 149.1 131 57.3
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 5.1e-28 129.4 245 32.7
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 2.6e-24 117.1 91 61.5
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.3e-23 114.8 260 31.9
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.5e-19 101.3 255 30.6
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 1.4e-17 94.7 64 67.2
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 3.8e-15 86.7 85 49.4


User provided reference genes

Program Settings