Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g23073_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 8.5e-36 153.7 113 100.0
MBI12_g23072_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 6.6e-28 127.5 108 88.9
MBI12_g33141_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 6.6e-28 127.5 101 99.0
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 2.8e-10 68.9 111 41.4
vmacro06477 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 2.8e-10 68.9 97 69.1
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 3.6e-10 68.6 107 52.3
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 8.1e-10 67.4 108 41.7
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 1.1e-09 67.0 95 44.2
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.1e-09 67.0 102 44.1
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 1.1e-09 67.0 87 48.3
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.4e-09 66.6 95 58.9
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 1.8e-09 66.2 85 48.2
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 1.8e-09 66.2 100 53.0
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.3e-09 65.9 95 55.8
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.3e-09 65.9 97 55.7
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 2.3e-09 65.9 97 49.5
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 3.1e-09 65.5 89 60.7
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.0e-09 65.1 97 49.5
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 4.0e-09 65.1 88 46.6
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 5.2e-09 64.7 97 52.6
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 5.2e-09 64.7 96 55.2
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 5.2e-09 64.7 85 47.1
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 8.9e-09 63.9 106 47.2
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 1.2e-08 63.5 87 46.0
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.2e-08 63.5 88 58.0
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.2e-08 63.5 87 59.8
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.2e-08 63.5 97 50.5
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.5e-08 63.2 97 53.6
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 1.5e-08 63.2 87 46.0
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 2.0e-08 62.8 95 44.2
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 2.6e-08 62.4 86 46.5
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 2.6e-08 62.4 87 44.8
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 2.6e-08 62.4 87 44.8
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 3.4e-08 62.0 100 53.0
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 4.4e-08 61.6 89 50.6
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 4.4e-08 61.6 89 50.6
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 5.8e-08 61.2 118 49.2
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 5.8e-08 61.2 85 52.9
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 7.5e-08 60.8 94 41.5
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 7.5e-08 60.8 88 43.2
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 1.3e-07 60.1 102 55.9
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.3e-07 60.1 90 51.1
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 1.3e-07 60.1 100 44.0
Thecc.03G212300 Theobroma cacao HOM05D003381 ORTHO05D003880 1.3e-07 60.1 104 64.4
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.7e-07 59.7 82 47.6
Peaxi162Scf01650g00008 Petunia axillaris HOM05D003381 ORTHO05D003880 2.2e-07 59.3 87 71.3
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.9e-07 58.9 82 62.2
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 2.9e-07 58.9 102 49.0
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 3.7e-07 58.5 85 41.2
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 6.4e-07 57.8 101 46.5
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 6.4e-07 57.8 110 39.1
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 8.3e-07 57.4 107 46.7
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 1.1e-06 57.0 83 47.0
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 1.1e-06 57.0 83 47.0
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.1e-06 57.0 82 61.0
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 1.4e-06 56.6 84 44.0
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 1.4e-06 56.6 80 42.5
Duzib205G0505 Durio zibethinus HOM05D003381 ORTHO05D003880 1.4e-06 56.6 85 71.8
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.4e-06 56.6 82 57.3
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.4e-06 56.6 82 62.2
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.4e-06 56.6 82 62.2
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.9e-06 56.2 82 61.0
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 2.4e-06 55.8 85 41.2
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 2.4e-06 55.8 85 48.2
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 2.4e-06 55.8 83 43.4
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 2.4e-06 55.8 94 40.4
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 3.2e-06 55.5 78 56.4
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 3.2e-06 55.5 82 59.8
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 3.2e-06 55.5 85 43.5
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 4.1e-06 55.1 97 39.2
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 5.4e-06 54.7 95 37.9
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 5.4e-06 54.7 98 40.8
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 7.1e-06 54.3 92 50.0
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 9.2e-06 53.9 102 37.3
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 9.2e-06 53.9 87 39.1
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 9.2e-06 53.9 87 39.1
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 9.2e-06 53.9 86 40.7


User provided reference genes

Program Settings