Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g23072_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.4e-56 223.0 140 100.0
MBI12_g33141_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 3.2e-40 168.7 116 98.3
MBI12_g23073_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 6.2e-28 127.9 108 88.9
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 1.4e-11 73.6 103 56.3
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 9.0e-11 70.9 99 55.6
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 3.4e-10 68.9 87 49.4
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.4e-10 68.9 95 56.8
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.4e-10 68.9 97 56.7
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 3.4e-10 68.9 97 50.5
vmacro06477 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 3.4e-10 68.9 88 73.9
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 4.5e-10 68.6 88 48.9
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 5.9e-10 68.2 87 48.3
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 5.9e-10 68.2 102 45.1
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 5.9e-10 68.2 97 50.5
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 5.9e-10 68.2 85 49.4
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 1.0e-09 67.4 89 46.1
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.0e-09 67.4 95 57.9
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.0e-09 67.4 100 57.0
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 1.3e-09 67.0 87 48.3
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 1.3e-09 67.0 96 55.2
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.7e-09 66.6 85 48.2
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.7e-09 66.6 99 55.6
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.7e-09 66.6 97 51.5
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.7e-09 66.6 107 41.1
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 2.2e-09 66.2 85 49.4
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.2e-09 66.2 97 54.6
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 2.2e-09 66.2 87 47.1
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 3.8e-09 65.5 87 47.1
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.8e-09 65.5 97 51.5
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 6.5e-09 64.7 88 58.0
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 6.5e-09 64.7 100 43.0
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 8.5e-09 64.3 87 46.0
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 8.5e-09 64.3 88 53.4
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 8.5e-09 64.3 88 45.5
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 1.1e-08 63.9 83 50.6
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 1.1e-08 63.9 83 50.6
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 1.4e-08 63.5 84 46.4
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.4e-08 63.5 98 43.9
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 1.9e-08 63.2 98 41.8
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 1.9e-08 63.2 87 51.7
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.9e-08 63.2 85 54.1
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.2e-08 62.4 94 58.5
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 3.2e-08 62.4 93 57.0
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 3.2e-08 62.4 100 45.0
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 3.2e-08 62.4 105 51.4
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 3.2e-08 62.4 87 57.5
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 4.2e-08 62.0 84 46.4
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 4.2e-08 62.0 82 46.3
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 4.2e-08 62.0 85 47.1
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 5.5e-08 61.6 83 63.9
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 5.5e-08 61.6 103 48.5
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 5.5e-08 61.6 88 50.0
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 5.5e-08 61.6 88 50.0
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 5.5e-08 61.6 88 43.2
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 7.2e-08 61.2 85 47.1
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 7.2e-08 61.2 89 42.7
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 9.3e-08 60.8 96 41.7
Peaxi162Scf01650g00008 Petunia axillaris HOM05D003381 ORTHO05D003880 9.3e-08 60.8 98 65.3
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 9.3e-08 60.8 82 62.2
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.2e-07 60.5 92 42.4
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 1.2e-07 60.5 80 45.0
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.2e-07 60.5 82 63.4
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 1.2e-07 60.5 87 43.7
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 1.6e-07 60.1 83 47.0
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.6e-07 60.1 94 54.3
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.6e-07 60.1 94 58.5
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.6e-07 60.1 94 58.5
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 2.1e-07 59.7 90 50.0
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 2.1e-07 59.7 100 48.0
Thecc.03G212300 Theobroma cacao HOM05D003381 ORTHO05D003880 2.1e-07 59.7 86 72.1
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.7e-07 59.3 89 41.6
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 2.7e-07 59.3 89 41.6
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 3.6e-07 58.9 83 44.6
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 3.6e-07 58.9 85 50.6
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.6e-07 58.9 88 40.9
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 3.6e-07 58.9 82 62.2
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 4.6e-07 58.5 89 48.3
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 6.1e-07 58.2 85 43.5
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 6.1e-07 58.2 88 42.0
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 6.1e-07 58.2 84 45.2
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 7.9e-07 57.8 88 40.9
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 7.9e-07 57.8 87 44.8
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 7.9e-07 57.8 83 42.2
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 7.9e-07 57.8 86 39.5
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 1.0e-06 57.4 78 57.7
Duzib205G0505 Durio zibethinus HOM05D003381 ORTHO05D003880 1.0e-06 57.4 85 71.8
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 1.0e-06 57.4 87 44.8
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 1.0e-06 57.4 84 44.0
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 1.3e-06 57.0 82 56.1
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 1.3e-06 57.0 105 36.2
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 1.3e-06 57.0 84 44.0
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 1.8e-06 56.6 79 44.3
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 3.0e-06 55.8 85 38.8
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 3.0e-06 55.8 88 42.0
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 3.9e-06 55.5 107 36.4
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 8.7e-06 54.3 84 41.7
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 8.7e-06 54.3 87 41.4


User provided reference genes

Program Settings