Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g21502_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 0.0e+00 1465.7 727 100.0
ATR0564G177 Amborella trichopoda HOM05D005923 ORTHO05D007376 3.7e-225 785.4 650 60.5
HPP92_028167 Vanilla planifolia HOM05D005923 ORTHO05D007376 1.4e-216 756.9 734 54.4
Mapoly0048s0028 Marchantia polymorpha HOM05D005923 ORTHO05D007376 6.3e-148 528.9 749 38.6
Zm00001eb398210 Zea mays HOM05D005923 ORTHO05D007376 5.9e-146 522.3 541 49.5
AagrBONN_evm.TU.Sc2ySwM_344.5471 Anthoceros agrestis HOM05D005923 ORTHO05D007376 7.4e-141 505.4 732 38.5
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 3.1e-139 500.0 710 39.0
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 6.5e-137 492.3 709 38.9
SMO228G0200 Selaginella moellendorffii HOM05D005923 ORTHO05D007376 2.5e-136 490.3 667 42.1
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 1.6e-135 487.6 710 38.2
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 2.7e-135 486.9 712 38.2
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 1.4e-134 484.6 710 39.0
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 4.0e-134 483.0 740 37.8
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 5.2e-134 482.6 749 38.3
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 8.8e-134 481.9 722 37.7
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.2e-133 481.5 706 37.3
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 2.0e-133 480.7 711 38.0
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 2.0e-133 480.7 712 37.8
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 4.4e-133 479.6 711 37.0
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 5.7e-133 479.2 713 37.7
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 1.7e-132 477.6 723 37.9
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 2.2e-132 477.2 737 38.0
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 3.7e-132 476.5 703 39.1
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 3.7e-132 476.5 710 38.3
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 6.3e-132 475.7 701 37.7
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 8.3e-132 475.3 730 36.8
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 1.4e-131 474.6 709 37.2
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 2.4e-131 473.8 744 36.7
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 4.1e-131 473.0 709 37.1
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 7.0e-131 472.2 710 37.9
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 7.0e-131 472.2 720 37.2
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 1.6e-130 471.1 735 36.7
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 2.0e-130 470.7 735 37.3
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 2.0e-130 470.7 709 37.1
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 2.7e-130 470.3 745 37.2
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 4.5e-130 469.5 710 37.2
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 7.7e-130 468.8 711 37.4
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 1.7e-129 467.6 708 36.6
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 2.2e-129 467.2 710 36.1
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 2.9e-129 466.8 757 36.7
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 5.0e-129 466.1 734 36.6
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 6.5e-129 465.7 749 36.2
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 8.5e-129 465.3 706 36.3
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 2.5e-128 463.8 716 36.6
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 3.2e-128 463.4 716 36.5
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 4.2e-128 463.0 704 36.8
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 5.5e-128 462.6 706 37.0
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 7.2e-128 462.2 770 36.0
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 3.6e-127 459.9 709 37.4
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 3.6e-127 459.9 711 36.1
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 3.6e-127 459.9 711 38.0
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 6.1e-127 459.1 704 37.6
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 1.0e-126 458.4 751 35.0
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 1.4e-126 458.0 769 36.9
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 1.4e-126 458.0 757 36.7
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 1.8e-126 457.6 709 37.1
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 2.3e-126 457.2 715 36.6
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 3.0e-126 456.8 709 37.1
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 5.2e-126 456.1 742 36.8
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 6.8e-126 455.7 763 35.4
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 8.8e-126 455.3 752 35.0
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 1.7e-124 451.1 707 36.4
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 1.7e-124 451.1 742 36.3
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 3.7e-124 449.9 740 35.0
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.1e-123 448.4 737 35.5
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 3.1e-123 446.8 718 35.0
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 7.0e-123 445.7 754 36.5
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 9.1e-123 445.3 709 35.3
Pp3c23_21040 Physcomitrium patens HOM05D005923 ORTHO05D007376 1.2e-122 444.9 716 38.4
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 1.2e-122 444.9 678 37.9
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 1.6e-122 444.5 733 34.9
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 2.7e-122 443.7 719 35.7
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 5.9e-122 442.6 746 36.1
Pp3c8_13610 Physcomitrium patens HOM05D005923 ORTHO05D007376 7.7e-122 442.2 779 35.9
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 7.7e-122 442.2 708 36.2
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 1.0e-121 441.8 747 35.5
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 1.3e-121 441.4 743 35.7
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 1.7e-121 441.0 743 35.0
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 1.7e-121 441.0 580 39.8
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 3.8e-121 439.9 748 35.4
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 3.8e-121 439.9 676 36.1
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 5.0e-121 439.5 711 36.1
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 5.0e-121 439.5 744 35.6
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 1.5e-120 438.0 715 35.5
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 1.5e-120 438.0 674 37.2
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 2.5e-120 437.2 714 35.2
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 3.3e-120 436.8 690 37.0
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 4.2e-120 436.4 744 35.6
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 9.5e-120 435.3 714 35.0
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 1.2e-119 434.9 723 35.1
Os07g0274100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 1.6e-119 434.5 714 35.3
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 1.6e-119 434.5 675 36.6
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 1.0e-118 431.8 794 33.0
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 5.2e-118 429.5 764 34.2
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 4.9e-116 422.9 686 35.9
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 3.2e-115 420.2 724 34.9
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 2.1e-111 407.5 645 36.0
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 5.2e-110 402.9 718 34.0
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 3.5e-106 390.2 666 34.4
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 1.5e-104 384.8 647 34.5
CDE09G0389 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 8.9e-102 375.6 485 41.2
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.6e-101 374.0 594 36.5
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 9.8e-101 372.1 564 36.7
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.0e-97 362.1 715 32.3
CDE06G0114 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 2.5e-96 357.5 325 56.0
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 1.1e-94 352.1 674 33.7
arahy.Tifrunner.gnm1.ann1.25XALN Arachis hypogaea HOM05D005923 ORTHO05D007376 1.8e-86 324.7 427 40.7
MELO3C008611.2 Cucumis melo HOM05D005923 ORTHO05D007376 1.2e-85 322.0 327 48.9
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 3.9e-81 307.0 568 33.3
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 4.5e-69 266.9 669 29.3
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 1.0e-57 229.2 422 33.6
Os03g0260100 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 4.3e-48 197.2 159 58.5
MD04G1248100 Malus domestica HOM05D005923 ORTHO05D007376 1.1e-43 182.6 330 34.2
Pp3c20_18430 Physcomitrium patens HOM05D005923 ORTHO05D007376 3.3e-40 171.0 546 26.0
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 2.0e-37 161.8 373 28.4
Actinidia06786 Actinidia chinensis HOM05D005923 ORTHO05D007376 4.5e-37 160.6 260 36.2
Nn1g09626 Nelumbo nucifera HOM05D005923 ORTHO05D007376 1.0e-36 159.5 126 56.3
Atru.chr12.1663 Acer truncatum HOM05D005923 ORTHO05D007376 6.5e-36 156.8 126 55.6
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 8.5e-36 156.4 353 31.2
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 3.1e-22 111.3 183 33.9
Atru.chr12.1695 Acer truncatum HOM05D005923 ORTHO05D007376 5.5e-19 100.5 175 34.9
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 9.8e-16 89.7 173 28.3
CDE07G1406 Ceratophyllum demersum HOM05D005923 ORTHO05D007376 4.8e-15 87.4 62 67.7
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 2.2e-12 78.6 72 41.7
SMO335G0023 Selaginella moellendorffii HOM05D047118 ORTHO05D007376 1.9e-11 75.5 159 35.2
CDE07G1004 Ceratophyllum demersum HOM05D000083 ORTHO05D018952 9.4e-11 73.2 66 53.0
Cre11.g478456 Chlamydomonas reinhardtii HOM05D005923 ORTHO05D007376 2.1e-10 72.0 406 21.7
CDE02G4030 Ceratophyllum demersum HOM05D005923 ORTHO05D000203 3.0e-09 68.2 100 37.0


User provided reference genes

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