Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 5.4e-56 220.7 108 100.0
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.1e-35 153.3 111 73.0
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 2.2e-33 145.6 107 67.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 3.8e-33 144.8 110 70.9
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 6.5e-33 144.1 111 66.7
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.1e-32 143.3 111 71.2
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 4.2e-32 141.4 108 63.9
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 4.2e-32 141.4 106 71.7
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.2e-32 141.4 108 70.4
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 5.5e-32 141.0 108 67.6
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.2e-31 139.8 108 66.7
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 7.9e-31 137.1 117 63.2
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.0e-30 136.7 122 63.1
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 1.4e-30 136.3 118 62.7
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 3.0e-30 135.2 109 67.9
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.9e-30 134.8 68 88.2
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 5.1e-30 134.4 74 83.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.1e-29 133.3 74 85.1
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 2.5e-29 132.1 110 65.5
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 4.3e-29 131.3 113 65.5
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 4.3e-29 131.3 107 58.9
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 4.3e-29 131.3 68 85.3
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 5.7e-29 131.0 118 63.6
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 5.7e-29 131.0 123 61.8
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 7.4e-29 130.6 111 64.0
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 7.4e-29 130.6 118 63.6
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 7.4e-29 130.6 68 86.8
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 7.4e-29 130.6 111 62.2
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 9.7e-29 130.2 111 62.2
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.3e-28 129.8 115 63.5
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.7e-28 129.4 86 75.6
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 1.7e-28 129.4 107 64.5
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 2.2e-28 129.0 111 64.9
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.2e-28 129.0 86 75.6
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.2e-28 129.0 117 61.5
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.8e-28 128.6 107 61.7
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.8e-28 128.6 107 61.7
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 2.8e-28 128.6 79 77.2
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.8e-28 128.6 115 63.5
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 2.8e-28 128.6 101 66.3
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.8e-28 128.6 116 62.9
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.8e-28 128.6 107 62.6
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.8e-28 128.6 77 84.4
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 3.7e-28 128.3 74 82.4
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.8e-28 127.9 118 58.5
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 6.3e-28 127.5 85 75.3
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 6.3e-28 127.5 86 73.3
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-28 127.5 74 82.4
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-28 127.5 74 82.4
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.3e-28 127.5 107 63.6
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 6.3e-28 127.5 75 80.0
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 8.2e-28 127.1 102 68.6
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 1.1e-27 126.7 118 61.9
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.1e-27 126.7 109 61.5
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.1e-27 126.7 69 84.1
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.4e-27 126.3 115 61.7
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.8e-27 125.9 73 83.6
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.8e-27 125.9 114 61.4
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.8e-27 125.9 115 61.7
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 1.8e-27 125.9 115 60.0
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 2.4e-27 125.6 73 79.5
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 2.4e-27 125.6 114 62.3
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.4e-27 125.6 115 61.7
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 3.1e-27 125.2 70 84.3
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 3.1e-27 125.2 79 79.7
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.3e-27 124.4 123 59.3
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 5.3e-27 124.4 148 52.7
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 6.9e-27 124.0 68 82.4
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 6.9e-27 124.0 83 74.7
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 6.9e-27 124.0 67 83.6
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.5e-26 122.9 70 82.9
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.5e-26 122.9 112 59.8
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 1.5e-26 122.9 67 79.1
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.5e-26 122.9 107 57.9
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 3.4e-26 121.7 75 78.7
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 4.5e-26 121.3 75 78.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 4.5e-26 121.3 73 76.7
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 5.9e-26 120.9 88 70.5
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 7.7e-26 120.6 111 59.5
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 7.7e-26 120.6 114 58.8
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.0e-25 120.2 108 61.1
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.7e-25 119.4 64 84.4
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 1.7e-25 119.4 117 55.6
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.7e-25 119.4 71 80.3
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 2.2e-25 119.0 72 79.2
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 2.2e-25 119.0 71 80.3
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 3.8e-25 118.2 117 55.6
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 3.8e-25 118.2 65 81.5
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 5.0e-25 117.9 72 77.8
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 6.5e-25 117.5 72 77.8
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 6.5e-25 117.5 72 77.8
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 6.5e-25 117.5 72 77.8
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 6.5e-25 117.5 73 76.7
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 6.5e-25 117.5 118 53.4
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 6.5e-25 117.5 72 76.4
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.1e-24 116.7 63 81.0
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 4.2e-24 114.8 86 67.4
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.2e-23 113.2 66 78.8
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.6e-23 112.8 83 66.3
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.0e-21 105.9 90 61.1
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.7e-20 101.7 70 64.3
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 1.8e-19 99.4 80 66.2
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.8e-19 99.4 73 67.1
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 1.5e-13 79.7 84 46.4
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 2.0e-13 79.3 88 55.7
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 4.4e-13 78.2 92 54.3
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 5.9e-10 67.8 94 54.3
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 2.2e-09 65.9 78 51.3
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 1.5e-08 63.2 72 52.8
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 1.2e-07 60.1 54 64.8
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 2.7e-07 58.9 84 50.0


User provided reference genes

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