Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 0.0e+00 1207.2 601 100.0
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 9.2e-262 906.7 583 75.6
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.3e-260 902.9 583 75.0
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 8.6e-252 873.6 591 71.7
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 5.6e-251 870.9 582 72.7
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 9.5e-251 870.2 583 72.2
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 3.6e-250 868.2 584 72.6
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.1e-249 866.7 581 71.1
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.1e-249 866.7 581 71.1
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.1e-249 866.7 580 71.9
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 5.2e-249 864.4 592 71.1
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.2e-248 863.2 581 70.6
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.2e-248 863.2 585 70.9
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.4e-248 861.7 587 71.0
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 3.4e-248 861.7 580 71.7
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.7e-247 859.4 580 71.9
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.2e-247 859.0 580 71.4
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.9e-247 858.6 587 70.5
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 8.3e-247 857.1 588 70.7
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 4.1e-246 854.7 578 72.0
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 5.4e-246 854.4 584 71.6
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 9.2e-246 853.6 594 69.9
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.7e-245 852.0 583 70.3
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 3.0e-244 848.6 579 71.2
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 8.6e-244 847.0 579 70.8
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.1e-243 846.7 580 71.9
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.9e-243 845.9 584 69.9
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 4.3e-243 844.7 584 69.7
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 5.6e-243 844.3 587 70.2
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 7.3e-243 844.0 592 70.6
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 9.5e-243 843.6 583 69.6
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 1.6e-242 842.8 579 70.3
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 3.6e-242 841.6 584 69.7
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 4.7e-242 841.3 580 70.3
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.4e-241 839.7 609 68.0
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.3e-241 839.0 579 70.1
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.3e-241 839.0 578 70.6
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.1e-241 838.6 579 70.6
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 5.2e-241 837.8 579 69.9
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 6.8e-241 837.4 577 70.7
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 6.8e-241 837.4 579 70.1
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 8.9e-241 837.0 578 70.4
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.5e-240 836.3 620 66.8
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.4e-240 835.1 578 70.4
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 5.8e-240 834.3 587 69.2
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.8e-240 834.3 578 70.2
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.3e-239 833.2 584 70.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.3e-239 833.2 577 70.2
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 3.8e-239 831.6 579 70.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 1.1e-238 830.1 577 69.0
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.4e-238 828.9 593 68.3
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.4e-238 828.9 578 69.4
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 3.2e-238 828.6 589 68.9
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 7.1e-238 827.4 577 70.4
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 9.2e-238 827.0 583 68.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 9.2e-238 827.0 583 69.3
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 9.2e-238 827.0 598 69.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 9.2e-238 827.0 581 68.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 7.8e-237 823.9 585 69.6
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.3e-236 823.2 585 68.9
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 3.0e-236 822.0 580 69.1
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 5.1e-236 821.2 580 69.0
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 5.6e-235 817.8 583 68.4
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 9.6e-235 817.0 584 68.3
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.8e-234 815.5 581 68.0
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 4.0e-233 811.6 670 61.5
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 5.2e-233 811.2 580 67.4
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.2e-232 810.1 581 68.8
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.7e-229 798.9 580 67.4
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.7e-228 796.2 581 67.0
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 5.1e-228 794.7 584 66.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 2.1e-226 789.3 538 70.8
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 6.9e-225 784.3 586 66.9
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 2.0e-224 782.7 536 71.1
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 2.9e-223 778.9 580 65.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.2e-221 773.5 587 65.4
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.7e-221 772.3 584 65.9
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 6.0e-221 771.2 581 66.1
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 7.9e-221 770.8 588 66.3
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.9e-220 768.5 590 66.1
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.9e-220 768.5 590 66.1
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 8.7e-220 767.3 582 64.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 8.7e-220 767.3 578 65.9
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 1.6e-218 763.1 585 65.8
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 2.8e-218 762.3 580 64.3
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.1e-214 750.4 583 65.4
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 2.4e-214 749.2 584 64.0
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 4.3e-211 738.4 536 66.8
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 7.4e-211 737.6 556 64.7
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.2e-208 730.3 577 64.1
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 7.9e-197 691.0 583 61.1
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.3e-196 690.3 586 61.8
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.4e-188 663.7 617 57.1
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.3e-186 657.1 550 60.2
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 7.7e-184 647.9 580 56.7
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 6.7e-180 634.8 581 56.3
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 4.8e-178 628.6 589 54.8
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 3.0e-172 609.4 590 55.1
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.2e-166 589.0 573 52.0
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.3e-162 574.7 474 60.8
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 1.4e-148 530.8 374 67.1
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.4e-124 451.1 526 48.9
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 6.6e-119 432.2 256 78.9
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.0e-90 338.6 210 74.8
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 3.8e-66 256.9 191 69.6
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.4e-55 221.9 197 53.8
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 6.3e-53 213.0 218 52.8
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 4.0e-47 193.7 107 81.3
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.1e-33 149.1 126 55.6
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 3.3e-25 120.9 99 55.6
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.6e-24 118.6 64 79.7
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.8e-24 117.9 80 70.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 4.4e-22 110.5 64 75.0
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.1e-15 89.4 68 73.5
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-12 79.0 36 97.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.9e-12 78.6 43 81.4
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.2e-08 65.9 48 64.6
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 8.1e-08 63.2 66 57.6
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 2.4e-07 61.6 136 36.0


User provided reference genes

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