Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.2e-94 349.0 183 100.0
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 4.2e-16 89.0 44 88.6
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.6e-15 87.0 45 84.4
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 3.5e-15 85.9 46 84.8
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.5e-15 85.9 44 86.4
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 6.0e-15 85.1 206 37.9
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 7.9e-15 84.7 44 86.4
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.8e-14 83.6 41 90.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 1.8e-14 83.6 44 86.4
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.8e-14 83.6 44 86.4
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.8e-14 83.6 41 90.2
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.9e-14 82.4 45 80.0
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 5.1e-14 82.0 44 81.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 6.7e-14 81.6 114 48.2
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 6.7e-14 81.6 45 82.2
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 6.7e-14 81.6 44 79.5
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 6.7e-14 81.6 44 84.1
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 6.7e-14 81.6 44 81.8
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 8.7e-14 81.3 45 80.0
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.1e-13 80.9 114 48.2
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.1e-13 80.9 44 79.5
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.1e-13 80.9 44 79.5
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.1e-13 80.9 45 80.0
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.1e-13 80.9 45 80.0
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.5e-13 80.5 44 84.1
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 2.5e-13 79.7 45 77.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 2.5e-13 79.7 116 47.4
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 3.3e-13 79.3 44 79.5
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.3e-13 79.0 44 75.0
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 5.7e-13 78.6 41 85.4
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 5.7e-13 78.6 44 75.0
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 5.7e-13 78.6 44 79.5
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 5.7e-13 78.6 177 35.0
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 9.7e-13 77.8 42 83.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 9.7e-13 77.8 44 79.5
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 9.7e-13 77.8 44 79.5
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.3e-12 77.4 204 33.8
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.3e-12 77.4 174 39.1
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.3e-12 77.4 44 79.5
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.3e-12 77.4 44 75.0
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.3e-12 77.4 44 75.0
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.6e-12 77.0 42 78.6
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 2.2e-12 76.6 42 78.6
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 2.2e-12 76.6 46 76.1
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 2.8e-12 76.3 39 87.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 2.8e-12 76.3 186 35.5
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 3.7e-12 75.9 185 34.1
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.7e-12 75.9 191 33.5
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 3.7e-12 75.9 172 35.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 6.3e-12 75.1 189 35.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 8.2e-12 74.7 180 36.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 8.2e-12 74.7 175 34.9
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 8.2e-12 74.7 44 75.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.1e-11 74.3 183 33.3
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.1e-11 74.3 146 39.0
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.1e-11 74.3 163 36.8
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.4e-11 73.9 130 42.3
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.8e-11 73.6 42 73.8
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 2.4e-11 73.2 193 34.2
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 2.4e-11 73.2 45 68.9
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 3.1e-11 72.8 117 41.0
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.1e-11 72.8 188 37.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 3.1e-11 72.8 46 67.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 5.3e-11 72.0 44 75.0
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 5.3e-11 72.0 46 71.7
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 5.3e-11 72.0 169 37.3
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 6.9e-11 71.6 42 76.2
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 9.0e-11 71.2 194 30.9
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.5e-10 70.5 200 35.5
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 2.0e-10 70.1 142 38.7
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 3.4e-10 69.3 38 81.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.4e-10 69.3 176 34.7
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 5.9e-10 68.6 44 68.2
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 5.9e-10 68.6 44 68.2
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 7.7e-10 68.2 44 70.5
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.3e-09 67.4 42 66.7
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.3e-09 67.4 44 68.2
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.7e-09 67.0 44 70.5
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 3.8e-09 65.9 132 36.4
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.8e-09 65.9 69 63.8
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 5.0e-09 65.5 44 65.9
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.9e-08 63.5 44 59.1
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 2.5e-08 63.2 187 34.2
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.6e-07 60.5 179 31.8


User provided reference genes

Program Settings