Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 2128.2 1088 100.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1672.5 1085 78.4
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1652.9 1080 77.6
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1573.9 1091 72.6
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1567.7 1091 72.9
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1564.7 1089 71.9
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1553.1 1088 73.0
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1549.3 1090 71.2
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1548.5 1079 71.3
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1548.1 1071 73.6
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1547.3 1075 71.3
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1545.4 1082 73.0
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1540.4 1123 70.5
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1086 71.8
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1539.2 1078 73.3
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1539.2 1079 73.5
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1534.6 1092 72.6
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1533.1 1079 73.3
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1531.5 1085 72.0
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1530.0 1083 73.0
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1521.1 1096 70.2
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1518.8 1084 70.3
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1516.1 1083 70.0
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1515.7 1074 73.4
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1514.2 1075 70.6
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1512.7 1076 70.4
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1510.4 1115 69.0
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1508.8 1077 71.1
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1506.9 1079 69.2
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1504.6 1089 71.1
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1502.6 1074 71.2
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1501.9 1078 70.9
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1501.9 1079 70.4
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1501.5 1079 70.2
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1501.5 1105 70.4
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1501.5 1074 71.1
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1499.2 1079 70.2
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1497.6 1076 72.6
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1497.3 1090 71.2
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1496.9 1075 71.2
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1495.7 1077 70.1
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1495.3 1081 69.4
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1492.6 1078 69.5
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1492.2 1085 69.1
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1484.5 1075 70.4
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1482.6 1077 69.8
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1481.5 1086 69.1
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1480.3 1088 68.6
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1479.9 1076 70.6
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1479.5 1080 70.3
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1479.2 1075 71.2
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1476.5 1078 69.5
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1475.7 1079 68.6
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1475.3 1078 70.1
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1471.8 1077 69.4
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1471.4 1076 69.1
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1470.3 1122 67.4
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1467.2 1076 69.2
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1465.3 1072 69.7
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1465.3 1075 69.2
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1465.3 1075 70.0
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1459.1 1090 67.1
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1458.7 1070 70.9
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1456.4 1073 70.0
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1453.3 1076 68.4
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1452.6 1081 69.4
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1451.4 1074 68.0
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1449.9 1072 70.0
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1449.5 1072 69.6
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1449.5 1094 69.0
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1444.9 1078 68.0
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1444.9 1073 69.6
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1443.3 1082 67.3
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1439.9 1078 67.8
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1438.3 1076 67.6
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1433.3 1069 69.4
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1423.3 1076 68.4
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1420.6 1075 69.1
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1418.3 1075 67.9
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1409.4 1085 67.4
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1409.0 1077 69.2
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1395.6 1078 66.9
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1380.9 1090 64.2
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1380.2 976 72.8
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1380.2 1208 60.8
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1347.0 1075 63.7
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1322.8 1135 61.9
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1317.0 1084 65.1
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1313.9 942 70.2
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1299.3 959 68.9
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1234.9 1193 56.5
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1182.9 1069 57.3
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1155.2 966 64.6
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1098.2 1085 57.3
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1089.3 758 70.7
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1088.6 757 70.3
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 9.6e-302 1040.4 756 69.6
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.9e-289 999.6 720 70.4
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 3.4e-283 978.8 1080 48.2
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 1.8e-276 956.4 1084 49.3
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 5.2e-263 911.8 1015 54.1
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.6e-248 863.6 713 63.5
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 2.7e-243 846.3 615 71.1
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 9.5e-233 811.2 1022 45.9
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 8.1e-208 728.4 538 69.1
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 6.7e-194 682.2 507 67.1
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 3.1e-191 673.3 1506 32.3
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 9.0e-175 618.6 656 52.4
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.5e-153 548.1 401 68.6
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 6.3e-128 463.0 338 70.7
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 9.6e-84 316.2 203 75.4
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 1.4e-50 206.1 170 60.6
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 4.2e-39 167.9 112 79.5
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.2e-22 113.2 59 86.4
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 4.8e-19 101.3 54 85.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.0e-16 93.6 65 66.2
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 8.3e-11 73.9 81 53.1
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 8.3e-11 73.9 81 53.1
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 7.0e-10 70.9 226 28.8
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 5.9e-09 67.8 78 50.0
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 6.6e-08 64.3 72 48.6
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 1.1e-07 63.5 72 48.6


User provided reference genes

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