Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 1.9e-34 148.7 79 100.0
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 2.7e-12 75.1 79 54.4
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 4.6e-12 74.3 80 61.2
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.3e-11 72.8 79 59.5
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 2.3e-11 72.0 87 54.0
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 8.7e-11 70.1 79 53.2
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 3.3e-10 68.2 84 58.3
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 7.4e-10 67.0 83 51.8
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 7.4e-10 67.0 82 51.2
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.1e-09 65.5 83 55.4
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 4.8e-09 64.3 84 51.2
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 4.8e-09 64.3 83 54.2
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 6.2e-09 63.9 84 52.4
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 8.1e-09 63.5 80 57.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.1e-08 63.2 79 51.9
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.1e-08 63.2 83 50.6
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 1.1e-08 63.2 80 52.5
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.4e-08 62.0 83 51.8
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.4e-08 62.0 83 51.8
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 2.4e-08 62.0 83 51.8
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 2.4e-08 62.0 79 50.6
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.4e-08 62.0 82 53.7
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 3.1e-08 61.6 85 54.1
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.1e-08 61.6 82 46.3
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 4.0e-08 61.2 83 51.8
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 5.3e-08 60.8 83 49.4
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 5.3e-08 60.8 83 53.0
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 5.3e-08 60.8 79 49.4
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 6.9e-08 60.5 92 47.8
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 6.9e-08 60.5 79 51.9
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 9.0e-08 60.1 83 49.4
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 1.2e-07 59.7 83 51.8
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 1.2e-07 59.7 79 49.4
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 1.2e-07 59.7 88 51.1
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 2.0e-07 58.9 83 49.4
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 2.0e-07 58.9 80 47.5
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 2.6e-07 58.5 80 52.5
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 55.6
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 2.6e-07 58.5 82 48.8
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 3.4e-07 58.2 79 51.9
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-07 58.2 79 51.9
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-07 58.2 79 51.9
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 3.4e-07 58.2 79 51.9
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 3.4e-07 58.2 81 53.1
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 4.5e-07 57.8 79 48.1
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 4.5e-07 57.8 83 50.6
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 4.5e-07 57.8 98 46.9
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 4.5e-07 57.8 81 46.9
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 5.8e-07 57.4 76 46.1
Nn1g00437 Nelumbo nucifera HOM05D008304 ORTHO05D004056 5.8e-07 57.4 82 43.9
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 5.8e-07 57.4 83 48.2
MBI02_g46466_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 7.6e-07 57.0 80 52.5
Potri.011G151900 Populus trichocarpa HOM05D008304 ORTHO05D004056 7.6e-07 57.0 80 48.8
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 7.6e-07 57.0 84 46.4
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 9.9e-07 56.6 80 45.0
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 9.9e-07 56.6 83 50.6
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 9.9e-07 56.6 81 50.6
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 9.9e-07 56.6 80 45.0
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 9.9e-07 56.6 74 52.7
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 9.9e-07 56.6 79 53.2
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 9.9e-07 56.6 80 50.0
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 9.9e-07 56.6 80 50.0
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.7e-06 55.8 79 46.8
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 1.7e-06 55.8 93 45.2
MBI02_g42223_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 2.2e-06 55.5 80 51.2
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 2.9e-06 55.1 79 50.6
ATR0304G024 Amborella trichopoda HOM05D005953 ORTHO05D004056 3.8e-06 54.7 79 45.6
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.8e-06 54.7 81 49.4
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 3.8e-06 54.7 76 44.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 44.4
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 4.9e-06 54.3 81 49.4
HanXRQChr07g0192251 Helianthus annuus HOM05D010428 ORTHO05D012179 4.9e-06 54.3 79 45.6
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 51.9
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 6.4e-06 53.9 78 47.4
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 6.4e-06 53.9 78 47.4
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 8.4e-06 53.5 79 49.4


User provided reference genes

Program Settings