Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 1.5e-104 382.9 201 100.0
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 1.6e-53 213.4 216 59.7
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 2.1e-53 213.0 201 64.7
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 2.1e-53 213.0 219 61.6
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 6.1e-53 211.5 214 58.4
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 6.1e-53 211.5 211 63.0
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.0e-52 210.7 215 61.4
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 1.0e-52 210.7 215 61.4
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 1.4e-52 210.3 200 61.5
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 2.3e-52 209.5 152 74.3
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 8.9e-52 207.6 146 78.1
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.5e-51 206.8 211 61.1
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.5e-51 206.8 162 69.8
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.0e-51 206.5 152 71.7
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 4.4e-51 205.3 204 64.2
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 4.4e-51 205.3 204 61.3
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 1.3e-50 203.8 150 74.0
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.3e-50 203.8 212 57.5
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 1.3e-50 203.8 152 71.7
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 4.9e-50 201.8 152 72.4
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 4.9e-50 201.8 188 62.2
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 6.4e-50 201.4 198 60.1
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 8.3e-50 201.1 207 59.4
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 1.1e-49 200.7 212 57.1
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.9e-49 199.9 223 53.8
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.9e-49 199.9 212 57.1
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 1.9e-49 199.9 194 62.4
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 2.4e-49 199.5 178 62.9
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 3.2e-49 199.1 151 74.2
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 3.2e-49 199.1 166 69.3
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 3.2e-49 199.1 166 69.3
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 5.4e-49 198.4 223 54.3
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 7.0e-49 198.0 178 64.6
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 9.2e-49 197.6 214 58.9
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.2e-48 197.2 178 62.9
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 1.6e-48 196.8 152 69.7
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 2.0e-48 196.4 173 65.3
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 2.0e-48 196.4 203 60.1
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 2.0e-48 196.4 178 63.5
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 2.0e-48 196.4 166 68.1
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 2.7e-48 196.1 206 57.3
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 2.7e-48 196.1 206 57.3
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 2.7e-48 196.1 206 57.3
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 2.7e-48 196.1 183 62.3
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 3.5e-48 195.7 158 69.0
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 6.0e-48 194.9 146 71.9
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 7.8e-48 194.5 223 54.7
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 1.0e-47 194.1 161 68.3
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 1.0e-47 194.1 162 67.9
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.0e-47 194.1 198 59.1
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 1.3e-47 193.7 173 64.2
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.3e-47 193.7 201 57.2
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 2.3e-47 193.0 175 65.1
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.3e-47 193.0 161 68.3
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 3.0e-47 192.6 149 71.1
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 5.0e-47 191.8 172 64.0
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 5.0e-47 191.8 206 56.8
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 6.6e-47 191.4 173 64.2
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 6.6e-47 191.4 178 61.8
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 8.6e-47 191.0 177 61.0
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 8.6e-47 191.0 169 63.9
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 8.6e-47 191.0 162 67.9
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 1.1e-46 190.7 163 65.0
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.5e-46 190.3 161 67.1
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 1.9e-46 189.9 161 67.7
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.9e-46 189.9 161 67.7
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 1.9e-46 189.9 209 56.9
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 1.9e-46 189.9 146 71.2
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 2.5e-46 189.5 207 56.5
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 2.5e-46 189.5 189 60.8
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.3e-46 189.1 161 67.1
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 3.3e-46 189.1 161 67.1
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 3.3e-46 189.1 191 59.7
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 5.6e-46 188.3 152 67.1
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.3e-46 188.0 161 66.5
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.2e-45 187.2 199 57.8
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 3.6e-45 185.7 198 60.6
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 3.6e-45 185.7 161 64.6
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 6.2e-45 184.9 163 66.3
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 1.1e-44 184.1 210 56.7
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 1.8e-44 183.3 151 65.6
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 3.1e-44 182.6 208 55.8
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.0e-44 182.2 152 68.4
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 2.6e-43 179.5 192 53.6
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 3.4e-43 179.1 150 66.7
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 9.8e-43 177.6 153 66.0
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 1.7e-42 176.8 215 54.4
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 3.2e-41 172.6 198 55.1
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 6.0e-40 168.3 119 79.0
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 6.0e-40 168.3 130 68.5
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 7.8e-40 167.9 196 54.6
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 3.9e-39 165.6 130 67.7
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.9e-38 163.3 153 63.4
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 1.2e-32 144.1 108 74.1
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 9.5e-30 134.4 132 61.4
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 3.2e-25 119.4 80 81.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 5.4e-25 118.6 104 59.6
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 2.1e-24 116.7 80 80.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 1.6e-21 107.1 162 42.0
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 2.1e-21 106.7 89 66.3
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 1.1e-17 94.4 103 60.2
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 7.1e-17 91.7 75 66.7
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 4.6e-16 89.0 124 44.4
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 1.3e-15 87.4 58 81.0
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 6.9e-12 75.1 120 41.7
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 3.4e-11 72.8 113 39.8
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 1.9e-09 67.0 109 40.4
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 5.4e-09 65.5 46 73.9
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 7.1e-09 65.1 44 77.3
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 7.9e-08 61.6 104 35.6
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.3e-06 55.8 37 75.7


User provided reference genes

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