Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g13713_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.5e-29 132.1 63 100.0
MBI15_g33041_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.2e-26 122.5 57 100.0
MBI16_g11017_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.2e-26 122.5 57 100.0
MBI16_g11621_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.7e-25 118.6 57 98.2
MBI18_g23803_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.9e-24 115.2 57 93.0
MBI19_g00148_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.2e-23 112.5 57 91.2
MBI14_g36171_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.1e-21 105.9 54 92.6
MBI18_g27928_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 1.4e-19 99.0 57 86.0
Lj4A124T57 Lonicera japonica HOM05D003328 ORTHO05D003722 9.7e-13 76.3 54 64.8
MBI16_g07038_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 5.3e-11 70.5 61 62.3
Aqoxy3G03729 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 6.9e-11 70.1 58 60.3
Oeu062183.1 Olea europaea HOM05D003328 ORTHO05D003722 1.2e-10 69.3 54 57.4
TAR629G1921 Trochodendron aralioides HOM05D003328 ORTHO05D003722 2.6e-10 68.2 58 56.9
Actinidia26271 Actinidia chinensis HOM05D003328 ORTHO05D003722 4.5e-10 67.4 52 59.6
Aqoxy1G03531 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 4.5e-10 67.4 58 58.6
Dinv33868 Davidia involucrata HOM05D003328 ORTHO05D003722 5.9e-10 67.0 50 66.0
Dinv34907 Davidia involucrata HOM05D003328 ORTHO05D003722 5.9e-10 67.0 52 61.5
Actinidia17606 Actinidia chinensis HOM05D003328 ORTHO05D003722 1.0e-09 66.2 52 59.6
CSS0002115 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 1.0e-09 66.2 50 64.0
CSS0026022 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 1.0e-09 66.2 50 64.0
vmacro05612 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 1.3e-09 65.9 59 57.6
Actinidia18081 Actinidia chinensis HOM05D003328 ORTHO05D003722 2.9e-09 64.7 54 59.3
ClCG11G004980 Citrullus lanatus HOM05D003328 ORTHO05D003722 5.0e-09 63.9 52 57.7
Sed0005495 Sechium edule HOM05D003328 ORTHO05D003722 5.0e-09 63.9 51 60.8
CiPaw.03G082700 Carya illinoinensis HOM05D003328 ORTHO05D003722 6.5e-09 63.5 49 59.2
Oeu031836.1 Olea europaea HOM05D003328 ORTHO05D003722 6.5e-09 63.5 54 51.9
Aqoxy3G03730 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 8.5e-09 63.2 50 60.0
Cpa.g.sc541.5 Carica papaya HOM05D003328 ORTHO05D003722 1.4e-08 62.4 50 56.0
Ciclev10012100m.g Citrus clementina HOM05D003328 ORTHO05D003722 2.5e-08 61.6 51 58.8
MELO3C022051.2 Cucumis melo HOM05D003328 ORTHO05D003722 2.5e-08 61.6 52 51.9
CSS0050346 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 3.2e-08 61.2 54 61.1
CsaV3_5G038710 Cucumis sativus L. HOM05D003328 ORTHO05D003722 3.2e-08 61.2 52 53.8
vmacro18125 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 7.2e-08 60.1 53 50.9
Manes.02G059700 Manihot esculenta HOM05D003328 ORTHO05D003722 9.4e-08 59.7 52 55.8
RcHm_v2.0_Chr2g0164841 Rosa chinensis HOM05D003328 ORTHO05D003722 9.4e-08 59.7 49 57.1
Haze_14379 Corylus avellana HOM05D003328 ORTHO05D003722 1.6e-07 58.9 55 52.7
Eucgr.J01410 Eucalyptus grandis HOM05D003328 ORTHO05D003722 1.6e-07 58.9 44 61.4
Rhsim10G0059400 Rhododendron simsii HOM05D003328 ORTHO05D003722 1.6e-07 58.9 50 50.0
MSTRG.15433 Avicennia marina HOM05D003328 ORTHO05D003722 2.1e-07 58.5 57 47.4
ECA232G1221 Erigeron canadensis HOM05D003328 ORTHO05D003722 2.1e-07 58.5 50 58.0
Glyma.08G251500 Glycine max HOM05D003328 ORTHO05D003722 2.1e-07 58.5 51 52.9
QL02p065219 Quercus lobata HOM05D003328 ORTHO05D003722 2.1e-07 58.5 50 56.0
Rhsim08G0077500 Rhododendron simsii HOM05D003328 ORTHO05D003722 2.1e-07 58.5 52 55.8
Rhsim08G0077700 Rhododendron simsii HOM05D003328 ORTHO05D003722 2.1e-07 58.5 52 55.8
Glyma.18G274200 Glycine max HOM05D003328 ORTHO05D003722 2.7e-07 58.2 51 52.9
Hma1.2p1_1837F.1_g304780 Hydrangea macrophylla HOM05D003328 ORTHO05D003722 2.7e-07 58.2 51 56.9
Potri.004G114300 Populus trichocarpa HOM05D003328 ORTHO05D003722 3.6e-07 57.8 49 57.1
Thecc.04G107000 Theobroma cacao HOM05D003328 ORTHO05D003722 3.6e-07 57.8 53 54.7
CANSAT64G0201 Cannabis sativa HOM05D003328 ORTHO05D003722 4.6e-07 57.4 54 46.3
Glyma.19G035600 Glycine max HOM05D003328 ORTHO05D003722 4.6e-07 57.4 49 53.1
TPR.G15938 Trifolium pratense HOM05D003328 ORTHO05D003722 4.6e-07 57.4 53 52.8
Medtr6g015995 Medicago truncatula HOM05D003328 ORTHO05D003722 6.1e-07 57.0 53 52.8
RcHm_v2.0_Chr2g0164801 Rosa chinensis HOM05D003328 ORTHO05D003722 6.1e-07 57.0 49 53.1
Sabra04G0071400 Salix brachista HOM05D003328 ORTHO05D003722 7.9e-07 56.6 41 56.1
VMungo0464G0668 Vigna mungo HOM05D003328 ORTHO05D003722 7.9e-07 56.6 52 53.8
Phvul.004G042600 Phaseolus vulgaris HOM05D003328 ORTHO05D003722 1.0e-06 56.2 52 53.8
Sabra17G0086600 Salix brachista HOM05D003328 ORTHO05D003722 1.0e-06 56.2 50 58.0
CiPaw.04G052000 Carya illinoinensis HOM05D003328 ORTHO05D003722 1.4e-06 55.8 53 49.1
Cc07_g04510 Coffea canephora HOM05D003328 ORTHO05D003722 1.4e-06 55.8 54 51.9
Prupe.3G248600 Prunus persica HOM05D003328 ORTHO05D003722 1.4e-06 55.8 37 64.9
TWI34G1159 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 1.4e-06 55.8 51 51.0
Duzib211G0567 Durio zibethinus HOM05D003328 ORTHO05D003722 1.8e-06 55.5 59 47.5
MD16G1014300 Malus domestica HOM05D003328 ORTHO05D003722 1.8e-06 55.5 48 56.2
Phvul.008G026300 Phaseolus vulgaris HOM05D003328 ORTHO05D003722 1.8e-06 55.5 51 49.0
GSVIVG01036543001 Vitis vinifera HOM05D003328 ORTHO05D003722 1.8e-06 55.5 53 54.7
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 2.3e-06 55.1 58 46.6
Duzib138G1365 Durio zibethinus HOM05D003328 ORTHO05D003722 3.0e-06 54.7 48 58.3
Atru.chr8.639 Acer truncatum HOM05D003328 ORTHO05D003722 3.9e-06 54.3 50 56.0
FAN09G3792 Fragaria x ananassa HOM05D003328 ORTHO05D003722 3.9e-06 54.3 51 56.9
MD09G1075500 Malus domestica HOM05D003328 ORTHO05D003722 3.9e-06 54.3 55 47.3
Potri.017G100600 Populus trichocarpa HOM05D003328 ORTHO05D003722 3.9e-06 54.3 50 56.0
Prupe.3G248700 Prunus persica HOM05D003328 ORTHO05D003722 3.9e-06 54.3 51 56.9
COL.COLO4_19737 Corchorus olitorius HOM05D003328 ORTHO05D003722 5.1e-06 53.9 48 50.0
Lalb_Chr02g0158801 Lupinus albus HOM05D003328 ORTHO05D003722 5.1e-06 53.9 49 51.0
Psat3g203200 Pisum sativum HOM05D003328 ORTHO05D003722 5.1e-06 53.9 51 47.1
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 5.1e-06 53.9 44 54.5
Atru.chr8.632 Acer truncatum HOM05D003328 ORTHO05D003722 6.7e-06 53.5 50 54.0
arahy.Tifrunner.gnm1.ann1.6PTW1V Arachis hypogaea HOM05D003328 ORTHO05D003722 6.7e-06 53.5 33 66.7
arahy.Tifrunner.gnm1.ann1.SVI1UB Arachis hypogaea HOM05D003328 ORTHO05D003722 6.7e-06 53.5 33 66.7
Lsat_1_v5_gn_4_173421 Lactuca sativa HOM05D003328 ORTHO05D003722 6.7e-06 53.5 50 52.0
MD09G1074800 Malus domestica HOM05D003328 ORTHO05D003722 6.7e-06 53.5 46 56.5
Hund13673 Selenicereus undatus HOM05D003328 ORTHO05D003722 6.7e-06 53.5 54 46.3
Sc11g0008840 Simmondsia chinensis HOM05D003328 ORTHO05D003722 6.7e-06 53.5 56 46.4
TWI60G0197 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 6.7e-06 53.5 56 46.4
Gorai.001G206900 Gossypium raimondii HOM05D003328 ORTHO05D003722 8.8e-06 53.1 39 56.4


User provided reference genes

Program Settings