Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g13712_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 3.1e-151 538.5 280 100.0
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 4.3e-44 182.6 306 43.5
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 1.3e-40 171.0 306 41.2
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 2.0e-33 147.1 306 38.9
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 5.2e-26 122.5 255 38.0
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 4.9e-24 115.9 271 38.0
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.1e-23 114.8 315 34.3
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 1.9e-23 114.0 289 32.9
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 4.6e-22 109.4 306 32.7
MBI04_g33415_MAGBIO Magnolia biondii HOM05D007199 ORTHO05D007257 1.1e-20 104.8 202 40.1
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 1.5e-20 104.4 307 30.0
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 2.5e-20 103.6 271 33.6
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 5.6e-20 102.4 267 32.2
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 9.6e-20 101.7 273 33.3
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 9.6e-20 101.7 266 32.3
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 9.6e-20 101.7 266 32.3
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 6.2e-19 99.0 276 32.2
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 6.2e-19 99.0 278 33.5
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 1.8e-18 97.4 299 32.8
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 2.4e-18 97.1 284 32.7
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 8.9e-18 95.1 270 32.6
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 8.9e-18 95.1 273 32.6
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 1.2e-17 94.7 284 32.4
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 4.4e-17 92.8 303 31.0
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 5.8e-17 92.4 315 32.1
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 9.9e-17 91.7 267 33.7
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.3e-16 91.3 257 31.5
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 2.2e-16 90.5 257 31.5
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 4.9e-16 89.4 203 36.5
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.1e-15 88.2 258 29.8
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-15 87.4 262 32.1
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-15 87.4 262 32.1
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.4e-15 87.0 272 31.2
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 4.2e-15 86.3 266 31.6
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 9.3e-15 85.1 262 31.7
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 9.3e-15 85.1 286 30.8
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 2.7e-14 83.6 267 30.3
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 4.6e-14 82.8 267 30.3
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 7.8e-14 82.0 315 29.2
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 7.8e-14 82.0 310 29.4
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 7.8e-14 82.0 269 32.7
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 1.0e-13 81.6 315 29.8
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 1.0e-13 81.6 280 31.8
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.3e-13 81.3 263 31.9
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 1.7e-13 80.9 319 29.5
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.0e-13 80.1 308 28.2
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 5.1e-13 79.3 277 33.2
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 8.7e-13 78.6 304 27.3
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 4.3e-12 76.3 305 28.5
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 4.3e-12 76.3 227 31.7
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.3e-11 74.7 268 29.9
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 2.8e-11 73.6 252 31.0
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 2.8e-11 73.6 308 28.2
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 4.8e-11 72.8 261 28.4
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 8.1e-11 72.0 261 30.7
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 2.4e-10 70.5 296 27.7
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 4.0e-10 69.7 284 27.8
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 5.3e-10 69.3 209 33.0
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 6.9e-10 68.9 294 29.9
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 6.9e-10 68.9 281 28.5
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.2e-09 68.2 265 29.4
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 2.0e-09 67.4 274 28.1
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 2.6e-09 67.0 86 43.0
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 7.6e-09 65.5 290 27.6
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 9.9e-09 65.1 199 29.1
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 2.9e-08 63.5 269 29.0
CDE02G0206 Ceratophyllum demersum HOM05D056078 ORTHO05D007257 3.8e-08 63.2 282 27.7
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 3.8e-08 63.2 317 27.1
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 4.9e-08 62.8 266 25.9
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.9e-08 62.8 264 26.1
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 6.4e-08 62.4 192 28.6
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 6.4e-08 62.4 250 26.0
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 8.4e-08 62.0 272 27.6
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.9e-07 60.8 267 29.2
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 2.4e-07 60.5 262 25.6
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 3.2e-07 60.1 259 27.8
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 4.2e-07 59.7 239 27.6
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 7.1e-07 58.9 253 27.3
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 7.1e-07 58.9 194 32.5
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 9.3e-07 58.5 272 27.2
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 1.2e-06 58.2 267 26.6
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 1.6e-06 57.8 101 31.7
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.6e-06 57.8 258 27.1
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 2.1e-06 57.4 185 31.4
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.1e-06 57.4 258 27.1
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 2.7e-06 57.0 187 29.4
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 2.7e-06 57.0 138 30.4
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 2.7e-06 57.0 191 31.9
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 3.5e-06 56.6 284 28.2
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 3.5e-06 56.6 232 29.7
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 6.0e-06 55.8 186 29.0


User provided reference genes

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