Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 2.4e-273 944.9 468 100.0
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 6.4e-194 681.0 502 67.9
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 4.4e-187 658.3 469 69.3
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 6.0e-184 647.9 467 69.6
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.2e-181 640.2 473 67.0
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 4.0e-180 635.2 473 66.2
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.0e-179 632.9 483 66.9
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.9e-178 629.0 484 65.7
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 3.8e-178 628.6 466 66.3
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 8.4e-178 627.5 475 66.7
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 3.2e-177 625.5 480 65.0
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 5.4e-177 624.8 480 64.8
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.1e-176 622.9 474 65.6
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 4.6e-176 621.7 474 65.4
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.3e-175 620.2 474 65.6
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 3.9e-175 618.6 472 65.3
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 5.1e-175 618.2 476 65.5
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 8.7e-175 617.5 471 66.5
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.5e-174 616.7 481 64.9
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 1.5e-174 616.7 470 66.8
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 3.3e-174 615.5 472 65.7
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 9.6e-174 614.0 478 63.6
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.1e-173 612.8 472 66.1
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.8e-173 612.5 471 66.7
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.1e-172 610.5 478 63.2
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.8e-172 609.8 472 65.5
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 1.8e-172 609.8 480 63.1
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 6.9e-172 607.8 482 64.5
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 6.9e-172 607.8 477 65.6
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.6e-171 605.9 501 62.9
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.4e-171 605.5 476 66.6
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 3.4e-171 605.5 469 65.5
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.7e-170 603.2 480 63.5
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.2e-170 602.8 488 62.5
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 2.2e-170 602.8 469 63.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.9e-170 602.4 485 64.7
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 4.9e-170 601.7 470 64.5
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 8.4e-170 600.9 468 64.7
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.4e-169 600.1 475 64.6
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.9e-169 599.7 474 63.9
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 5.4e-169 598.2 469 65.2
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.6e-168 596.7 480 64.0
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 2.7e-168 595.9 482 63.3
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.5e-168 595.5 482 64.7
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 6.0e-168 594.7 468 63.9
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.3e-167 593.6 480 64.8
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.7e-167 593.2 489 63.0
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 3.0e-167 592.4 478 65.1
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.9e-167 592.0 485 61.2
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 8.7e-167 590.9 472 61.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 5.6e-166 588.2 484 61.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 5.6e-166 588.2 483 62.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.3e-165 587.0 489 62.2
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.1e-165 586.3 479 61.8
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.8e-165 585.9 487 61.2
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.4e-164 583.6 490 60.6
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 2.4e-164 582.8 474 62.4
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.4e-164 582.8 472 61.0
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 3.1e-164 582.4 479 63.7
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 4.0e-164 582.0 473 63.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 9.0e-164 580.9 481 61.1
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 4.5e-163 578.6 463 63.3
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 7.6e-163 577.8 486 62.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.2e-162 576.2 484 60.5
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 3.8e-162 575.5 490 61.8
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.9e-161 573.2 487 61.4
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.4e-161 572.8 490 60.2
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.2e-161 572.4 484 60.1
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.2e-160 570.5 491 61.1
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 2.7e-160 569.3 499 59.7
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.7e-160 569.3 467 61.0
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 3.9e-159 565.5 466 61.6
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 7.4e-158 561.2 478 59.4
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.1e-157 559.7 482 59.5
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 4.8e-157 558.5 478 59.2
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 4.8e-157 558.5 476 59.5
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 4.8e-157 558.5 478 59.2
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 4.8e-157 558.5 476 59.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 8.1e-157 557.8 504 58.1
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.4e-156 556.2 485 59.0
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 2.4e-156 556.2 484 58.5
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 5.3e-156 555.1 493 58.2
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 6.9e-156 554.7 476 60.5
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 9.0e-156 554.3 481 59.7
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 2.6e-155 552.7 479 59.5
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 2.2e-154 549.7 488 59.0
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 2.2e-154 549.7 477 59.7
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 1.9e-153 546.6 482 58.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.3e-149 533.9 466 59.0
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.6e-149 533.5 478 57.5
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 8.2e-149 531.2 351 72.4
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 2.5e-142 509.6 470 56.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.2e-138 496.5 472 54.2
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.5e-137 493.0 482 54.6
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.2e-137 492.7 470 55.1
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 4.6e-136 488.8 471 55.4
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.9e-130 469.5 421 60.1
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 4.7e-128 462.2 368 61.1
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.0e-123 446.8 308 69.2
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 9.7e-118 427.9 476 48.9
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.4e-95 354.4 348 56.9
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 7.5e-94 348.6 349 59.6
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.9e-85 320.1 462 39.8
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 2.3e-50 204.1 466 33.7
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.9e-49 201.1 444 32.4
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 6.9e-47 192.6 275 37.8
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 3.5e-43 180.3 240 35.8
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.1e-42 176.4 474 30.4
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 2.0e-30 137.9 109 66.1
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 6.5e-29 132.9 90 61.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.1e-23 113.6 60 76.7
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 6.5e-21 106.3 69 68.1
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 6.1e-19 99.8 162 33.3
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 5.9e-14 83.2 78 57.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 6.1e-11 73.2 78 53.8
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-10 71.6 33 87.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 7.7e-06 56.2 27 92.6


User provided reference genes

Program Settings