Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 2.0e-92 342.4 175 100.0
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 3.2e-90 335.1 175 97.1
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 5.2e-24 115.2 164 50.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 8.9e-24 114.4 164 50.0
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.0e-23 113.2 158 50.0
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.9e-22 109.4 163 48.5
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.7e-19 100.1 157 47.1
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-18 97.4 161 44.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 2.5e-18 96.3 163 46.6
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 3.3e-18 95.9 169 43.2
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 4.3e-18 95.5 165 44.8
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.3e-18 94.7 160 43.8
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 1.2e-17 94.0 166 43.4
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.6e-17 93.6 163 43.6
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.6e-17 92.4 163 42.3
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 8.1e-17 91.3 173 43.4
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 3.1e-16 89.4 181 40.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.0e-16 89.0 163 42.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 5.2e-16 88.6 149 44.3
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 6.8e-16 88.2 189 39.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 8.9e-16 87.8 190 37.4
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 8.9e-16 87.8 157 40.1
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.5e-15 87.0 158 39.2
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 2.0e-15 86.7 181 39.8
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 2.0e-15 86.7 163 39.9
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 2.0e-15 86.7 160 43.8
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 7.6e-15 84.7 158 40.5
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 6.4e-14 81.6 166 38.0
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.4e-13 80.5 196 38.3
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.2e-13 79.3 163 37.4
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 3.2e-13 79.3 169 41.4
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 4.1e-13 79.0 173 38.7
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 5.4e-13 78.6 183 37.7
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 7.1e-13 78.2 153 36.6
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 7.1e-13 78.2 175 38.9
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 9.2e-13 77.8 155 41.3
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.2e-12 77.4 160 37.5
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.6e-12 77.0 152 36.2
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.6e-12 77.0 169 40.8
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 1.6e-12 77.0 158 39.9
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 2.7e-12 76.3 160 40.0
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 3.5e-12 75.9 150 34.0
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 3.5e-12 75.9 158 38.6
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 6.0e-12 75.1 152 34.9
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 7.8e-12 74.7 177 37.3
Os04g0521700 Oryza sativa ssp. japonica HOM05D007580 ORTHO05D009620 1.0e-11 74.3 161 34.8
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.3e-11 73.9 152 34.9
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 3.9e-11 72.4 189 32.8
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 3.9e-11 72.4 189 32.8
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 5.1e-11 72.0 190 32.6
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 6.6e-11 71.6 159 38.4
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 8.6e-11 71.2 157 33.1
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.1e-10 70.9 155 38.7
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 1.5e-10 70.5 172 37.8
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 2.5e-10 69.7 145 36.6
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 3.3e-10 69.3 153 33.3
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 4.3e-10 68.9 152 33.6
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 5.6e-10 68.6 150 36.0
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 9.6e-10 67.8 168 37.5
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 9.6e-10 67.8 179 34.1
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 2.8e-09 66.2 174 36.8
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 2.8e-09 66.2 160 36.2
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 4.7e-09 65.5 169 34.3
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 6.2e-09 65.1 145 36.6
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 1.8e-08 63.5 160 39.4
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 1.8e-08 63.5 177 35.6
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 3.1e-08 62.8 132 38.6
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.0e-08 62.4 183 34.4
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 5.2e-08 62.0 160 35.0
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 2.6e-07 59.7 152 36.2
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 3.4e-07 59.3 180 30.6
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 4.4e-07 58.9 113 35.4
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 5.8e-07 58.5 152 29.6
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.7e-06 57.0 131 37.4
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 2.9e-06 56.2 157 33.8


User provided reference genes

Program Settings