Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 0.0e+00 1538.5 783 100.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 0.0e+00 1242.3 720 91.4
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 7.9e-205 718.0 743 57.9
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 2.5e-203 713.0 737 56.9
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 3.3e-195 686.0 747 53.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 1.7e-191 673.7 741 53.0
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 6.5e-191 671.8 740 54.2
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 1.1e-190 671.0 734 52.6
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.5e-190 669.8 744 52.8
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 2.5e-190 669.8 743 52.6
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 9.3e-190 667.9 744 52.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.2e-189 667.5 742 54.3
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.6e-189 665.6 742 52.6
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.0e-188 664.5 740 53.2
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.0e-188 664.5 740 53.2
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.5e-187 660.6 740 53.0
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.5e-187 659.8 744 52.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.7e-186 656.0 736 53.8
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.2e-183 646.7 737 52.2
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 4.2e-182 642.5 755 51.4
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 7.2e-182 641.7 750 52.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.1e-181 640.2 744 51.5
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 3.0e-180 636.3 742 51.3
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.1e-179 634.4 736 52.2
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.3e-178 630.9 746 51.5
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 3.7e-178 629.4 744 50.5
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 6.3e-178 628.6 738 50.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 8.2e-178 628.2 737 50.9
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 9.1e-177 624.8 750 50.5
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.0e-175 619.0 742 49.6
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.4e-174 617.5 742 49.7
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 2.7e-173 613.2 738 48.5
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 5.7e-171 605.5 738 50.4
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 7.4e-171 605.1 762 48.7
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 5.3e-169 599.0 747 48.6
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 7.0e-169 598.6 738 50.1
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.0e-168 597.0 745 48.3
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 7.7e-168 595.1 747 48.9
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.3e-167 594.3 742 48.5
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.9e-166 590.5 738 49.7
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 7.2e-166 588.6 753 47.3
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.1e-165 587.0 747 47.4
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 2.7e-165 586.6 743 47.9
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.7e-165 586.6 745 48.3
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 3.6e-165 586.3 742 48.5
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.3e-164 583.6 734 47.8
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 4.0e-164 582.8 747 47.1
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 5.2e-164 582.4 740 48.9
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.8e-164 581.6 743 48.9
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 8.8e-164 581.6 759 47.3
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.2e-163 581.3 759 46.5
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.0e-163 580.5 759 47.3
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.3e-162 577.8 752 46.0
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 4.8e-162 575.9 763 46.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 6.3e-162 575.5 739 47.4
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 6.3e-162 575.5 733 47.9
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 6.3e-162 575.5 733 47.9
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 8.2e-162 575.1 750 48.1
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 3.1e-161 573.2 743 47.2
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.0e-160 570.5 737 47.4
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 7.7e-160 568.5 733 47.1
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 8.5e-159 565.1 755 44.9
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.7e-157 560.1 756 45.0
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 1.4e-156 557.8 729 47.6
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.2e-156 555.8 700 48.1
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 8.8e-156 555.1 754 45.9
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.4e-153 547.7 735 46.3
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.4e-153 547.0 752 46.9
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 9.1e-153 545.0 731 46.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.7e-152 543.5 676 48.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.7e-151 540.8 744 45.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 4.2e-150 536.2 752 46.8
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.3e-148 530.4 736 45.0
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.7e-146 524.2 739 45.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 6.3e-146 522.3 740 45.3
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.8e-145 520.8 741 44.8
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 5.4e-145 519.2 745 45.0
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 9.2e-145 518.5 739 44.9
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.2e-144 518.1 739 44.9
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.0e-144 517.3 742 43.8
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 4.5e-144 516.2 739 44.1
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 7.8e-144 515.4 746 44.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 3.3e-142 510.0 738 43.5
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 5.6e-142 509.2 750 44.5
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 2.8e-141 506.9 735 44.5
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 2.9e-138 496.9 732 44.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 3.2e-137 493.4 646 48.6
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.0e-135 488.4 744 43.5
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.1e-132 478.4 739 41.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 6.8e-132 475.7 733 42.7
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 4.4e-131 473.0 730 41.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.7e-128 463.8 604 49.2
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 7.3e-126 455.7 732 41.9
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.4e-116 424.9 601 44.6
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.9e-113 414.5 547 49.7
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 8.4e-106 389.0 720 38.5
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 7.1e-105 386.0 598 41.6
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 9.6e-102 375.6 473 48.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.3e-95 355.1 340 56.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.8e-93 347.4 518 42.9
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 9.0e-92 342.4 534 43.3
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.7e-74 285.0 235 63.8
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-71 275.4 280 56.8
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.7e-69 268.5 688 35.3
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.9e-59 233.4 225 56.9
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 1.0e-58 232.6 842 27.2
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.1e-57 229.2 475 39.8
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.6e-54 218.0 805 27.0
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 9.7e-54 216.1 154 68.8
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 2.4e-52 211.5 772 30.1
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.1e-52 210.7 243 49.4
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.2e-48 199.1 549 32.2
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 6.7e-47 193.4 139 68.3
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.7e-43 181.4 208 47.1
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.7e-37 162.2 572 28.7
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 5.0e-34 150.6 477 27.7
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.0e-23 116.3 117 51.3
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 2.5e-17 95.1 71 63.4
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 7.8e-11 73.6 154 40.3


User provided reference genes

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