Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g43529_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 1.9e-65 252.3 124 100.0
MBI05_g22765_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 2.0e-38 162.5 130 66.9
MBI19_g46601_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 6.3e-32 141.0 99 73.7
MBI09_g07742_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D001552 2.4e-31 139.0 112 67.9
MBI12_g47575_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 2.0e-30 136.0 108 66.7
MBI08_g30376_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 7.7e-30 134.0 103 68.9
MBI01_g02164_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 1.0e-29 133.7 108 65.7
MBI09_g20570_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 4.2e-28 128.3 128 57.8
MBI18_g30383_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 7.7e-22 107.5 68 77.9
MBI03_g02130_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 2.2e-21 105.9 91 63.7
MBI06_g46050_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 8.5e-21 104.0 90 61.1
MBI16_g13192_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D001552 1.5e-20 103.2 110 53.6
Nn1g00632 Nelumbo nucifera HOM05D000548 ORTHO05D001552 2.2e-16 89.4 108 50.0
ATR1125G088 Amborella trichopoda HOM05D000548 ORTHO05D001552 6.3e-16 87.8 115 40.9
Aqoxy3G00242 Aquilegia oxysepala HOM05D000548 ORTHO05D001552 5.4e-15 84.7 112 45.5
TAR629G2613 Trochodendron aralioides HOM05D000548 ORTHO05D001552 4.5e-14 81.6 108 46.3
MBI08_g38848_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011935 1.7e-13 79.7 81 54.3
MBI16_g28237_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011935 1.7e-13 79.7 97 48.5
QL01p040509 Quercus lobata HOM05D000548 ORTHO05D001552 1.7e-13 79.7 111 45.0
TAR622G0465 Trochodendron aralioides HOM05D000548 ORTHO05D001552 1.7e-13 79.7 110 42.7
PSO063G0045 Papaver somniferum HOM05D000548 ORTHO05D001552 2.9e-13 79.0 110 43.6
MBI15_g22201_MAGBIO Magnolia biondii HOM05D000548 ORTHO05D011740 3.8e-13 78.6 49 81.6
PSO782G0850 Papaver somniferum HOM05D000548 ORTHO05D001552 3.8e-13 78.6 110 42.7
CSS0017130 Camellia sinensis var. sinensis HOM05D000548 ORTHO05D001552 6.5e-13 77.8 112 42.0
CSS0042728 Camellia sinensis var. sinensis HOM05D000548 ORTHO05D001552 6.5e-13 77.8 112 42.0
CDE04G2496 Ceratophyllum demersum HOM05D000548 ORTHO05D001552 8.5e-13 77.4 94 46.8
Dinv31615 Davidia involucrata HOM05D000548 ORTHO05D001552 8.5e-13 77.4 112 41.1
Thecc.02G224900 Theobroma cacao HOM05D000548 ORTHO05D001552 8.5e-13 77.4 132 38.6
Gohir.A04G097800 Gossypium hirsutum HOM05D000548 ORTHO05D001552 1.1e-12 77.0 107 41.1
Gohir.D04G137500 Gossypium hirsutum HOM05D000548 ORTHO05D001552 1.1e-12 77.0 107 41.1
Gorai.012G121900 Gossypium raimondii HOM05D000548 ORTHO05D001552 1.1e-12 77.0 107 41.1
Lj6A754T51 Lonicera japonica HOM05D000548 ORTHO05D001552 1.1e-12 77.0 119 42.0
Potri.010G122200 Populus trichocarpa HOM05D000548 ORTHO05D001552 3.2e-12 75.5 125 40.0
Rhsim12G0085700 Rhododendron simsii HOM05D000548 ORTHO05D001552 4.2e-12 75.1 141 36.9
Actinidia38377 Actinidia chinensis HOM05D000548 ORTHO05D001552 5.5e-12 74.7 101 42.6
Duzib251G0415 Durio zibethinus HOM05D000548 ORTHO05D001552 9.4e-12 73.9 132 37.1
Ciclev10014065m.g Citrus clementina HOM05D000548 ORTHO05D001552 1.2e-11 73.6 131 35.1
Sc11g0003540 Simmondsia chinensis HOM05D000548 ORTHO05D001552 1.2e-11 73.6 100 43.0
SGA_v2.0_scaffold38G14966 Striga asiatica HOM05D000548 ORTHO05D001552 1.6e-11 73.2 127 40.2
Duzib248G0424 Durio zibethinus HOM05D000548 ORTHO05D001552 2.1e-11 72.8 132 37.9
CiPaw.06G018000 Carya illinoinensis HOM05D000548 ORTHO05D001552 2.7e-11 72.4 101 41.6
Sabra10G0092300 Salix brachista HOM05D000548 ORTHO05D001552 2.7e-11 72.4 125 38.4
Atru.chr11.164 Acer truncatum HOM05D000548 ORTHO05D001552 3.6e-11 72.0 108 39.8
GSVIVG01008317001 Vitis vinifera HOM05D000548 ORTHO05D001552 4.7e-11 71.6 112 40.2
FAN08G1473 Fragaria x ananassa HOM05D000548 ORTHO05D001552 6.1e-11 71.2 109 41.3
FvH4_5g11860 Fragaria vesca HOM05D000548 ORTHO05D001552 8.0e-11 70.9 109 41.3
FAN07G2112 Fragaria x ananassa HOM05D000548 ORTHO05D001552 8.0e-11 70.9 113 38.9
FAN13G3165 Fragaria x ananassa HOM05D000548 ORTHO05D001552 8.0e-11 70.9 109 41.3
Sabra08G0093600 Salix brachista HOM05D000548 ORTHO05D001552 8.0e-11 70.9 155 36.1
Actinidia02462 Actinidia chinensis HOM05D000548 ORTHO05D001552 1.0e-10 70.5 108 41.7
CSS0050289 Camellia sinensis var. sinensis HOM05D000548 ORTHO05D001552 1.0e-10 70.5 108 41.7
Dinv15696 Davidia involucrata HOM05D000548 ORTHO05D001552 1.4e-10 70.1 108 39.8
TWI15G0474 Tripterygium wilfordii HOM05D000548 ORTHO05D001552 1.4e-10 70.1 109 39.4
Potri.008G123300 Populus trichocarpa HOM05D000548 ORTHO05D001552 1.8e-10 69.7 129 38.0
CAN.G610.58 Capsicum annuum HOM05D000548 ORTHO05D001552 4.0e-10 68.6 110 39.1
FvH4_4g26990 Fragaria vesca HOM05D000548 ORTHO05D001552 4.0e-10 68.6 108 39.8
FAN12G2934 Fragaria x ananassa HOM05D000548 ORTHO05D001552 4.0e-10 68.6 108 39.8
FAN12G3869 Fragaria x ananassa HOM05D000548 ORTHO05D001552 4.0e-10 68.6 108 39.8
SEGI_41469 Sequoiadendron giganteum HOM05D000548 ORTHO05D001552 4.0e-10 68.6 99 39.4
TWI60G0259 Tripterygium wilfordii HOM05D000548 ORTHO05D001552 4.0e-10 68.6 109 37.6
Psat7g010880 Pisum sativum HOM05D000548 ORTHO05D001552 5.2e-10 68.2 101 39.6
RcHm_v2.0_Chr4g0434791 Rosa chinensis HOM05D000548 ORTHO05D001552 5.2e-10 68.2 108 38.9
Sed0007904 Sechium edule HOM05D000548 ORTHO05D001552 5.2e-10 68.2 107 40.2
vmacro17704 Vaccinium macrocarpon HOM05D000548 ORTHO05D001552 5.2e-10 68.2 99 42.4
CANSAT80G1741 Cannabis sativa HOM05D000548 ORTHO05D001552 6.8e-10 67.8 140 32.1
Ca_17313_v3 Cicer arietinum L. HOM05D000548 ORTHO05D001552 6.8e-10 67.8 101 39.6
Glyma.05G237500 Glycine max HOM05D000548 ORTHO05D001552 6.8e-10 67.8 103 40.8
MD06G1217900 Malus domestica HOM05D000548 ORTHO05D001552 6.8e-10 67.8 99 42.4
Nn6g33678 Nelumbo nucifera HOM05D000548 ORTHO05D001552 6.8e-10 67.8 108 42.6
Prupe.1G314300 Prunus persica HOM05D000548 ORTHO05D001552 6.8e-10 67.8 88 43.2
Hund25049 Selenicereus undatus HOM05D000548 ORTHO05D001552 6.8e-10 67.8 101 44.6
MSTRG.13547 Avicennia marina HOM05D000548 ORTHO05D001552 8.8e-10 67.4 132 36.4
DCAR_007254 Daucus carota HOM05D000548 ORTHO05D001552 8.8e-10 67.4 101 42.6
Manes.06G065800 Manihot esculenta HOM05D000548 ORTHO05D001552 8.8e-10 67.4 121 37.2
Rhsim08G0131900 Rhododendron simsii HOM05D000548 ORTHO05D001552 8.8e-10 67.4 99 42.4
RcHm_v2.0_Chr7g0185731 Rosa chinensis HOM05D000548 ORTHO05D001552 1.2e-09 67.0 109 38.5
Glyma.08G044700 Glycine max HOM05D000548 ORTHO05D001552 2.0e-09 66.2 103 39.8
MSTRG.856 Avicennia marina HOM05D000548 ORTHO05D001552 2.6e-09 65.9 106 38.7
MELO3C017320.2 Cucumis melo HOM05D000548 ORTHO05D001552 2.6e-09 65.9 107 39.3
Lsat_1_v5_gn_3_115841 Lactuca sativa HOM05D000548 ORTHO05D011740 2.6e-09 65.9 148 33.8
Lj5C150T18 Lonicera japonica HOM05D000548 ORTHO05D001552 2.6e-09 65.9 100 40.0
Lalb_Chr05g0222381 Lupinus albus HOM05D000548 ORTHO05D001552 2.6e-09 65.9 131 36.6
MD16G1039900 Malus domestica HOM05D000548 ORTHO05D001552 2.6e-09 65.9 81 46.9
Oeu034218.1 Olea europaea HOM05D000548 ORTHO05D001552 2.6e-09 65.9 100 40.0
vmacro01391 Vaccinium macrocarpon HOM05D000548 ORTHO05D001552 2.6e-09 65.9 131 35.9
arahy.Tifrunner.gnm1.ann1.40B6EU Arachis hypogaea HOM05D000548 ORTHO05D001552 3.4e-09 65.5 101 40.6
arahy.Tifrunner.gnm1.ann1.FYT1UN Arachis hypogaea HOM05D000548 ORTHO05D001552 3.4e-09 65.5 101 40.6
HanXRQChr08g0213501 Helianthus annuus HOM05D000548 ORTHO05D001552 3.4e-09 65.5 137 35.0
Sc04g0006160 Simmondsia chinensis HOM05D000548 ORTHO05D001552 3.4e-09 65.5 151 36.4
THA.LOC104816755 Tarenaya hassleriana HOM05D000548 ORTHO05D001552 3.4e-09 65.5 75 46.7
CANSAT01G1036 Cannabis sativa HOM05D000548 ORTHO05D001552 4.4e-09 65.1 108 37.0
CsaV3_1G003960 Cucumis sativus L. HOM05D000548 ORTHO05D001552 4.4e-09 65.1 107 39.3
GSVIVG01011863001 Vitis vinifera HOM05D000548 ORTHO05D001552 4.4e-09 65.1 113 38.9
MSTRG.2224 Avicennia marina HOM05D000548 ORTHO05D001552 5.7e-09 64.7 143 33.6
ClCG06G014680 Citrullus lanatus HOM05D000548 ORTHO05D001552 5.7e-09 64.7 107 39.3
Ciclev10018545m.g Citrus clementina HOM05D000548 ORTHO05D001552 7.5e-09 64.3 105 38.1
Nitab4.5_0001616g0110 Nicotiana tabacum HOM05D000548 ORTHO05D001552 7.5e-09 64.3 85 45.9
Nitab4.5_0005528g0100 Nicotiana tabacum HOM05D000548 ORTHO05D001552 7.5e-09 64.3 85 45.9
Os01g0689451 Oryza sativa ssp. japonica HOM05D000548 ORTHO05D001552 7.5e-09 64.3 144 34.7
Sopen05g004870 Solanum pennellii HOM05D000548 ORTHO05D001552 7.5e-09 64.3 101 38.6
A05p31360 Brassica napus HOM05D000548 ORTHO05D001552 9.8e-09 63.9 101 40.6
C05p47660 Brassica napus HOM05D000548 ORTHO05D001552 9.8e-09 63.9 101 40.6
BolC5t33474H Brassica oleracea HOM05D000548 ORTHO05D001552 9.8e-09 63.9 101 40.6
BraA05t21974Z Brassica rapa HOM05D000548 ORTHO05D001552 9.8e-09 63.9 101 40.6
Medtr8g104410 Medicago truncatula HOM05D000548 ORTHO05D001552 9.8e-09 63.9 101 37.6
Ah.03g138270 Amaranthus hybridus HOM05D000548 ORTHO05D001552 1.3e-08 63.5 83 47.0
Migut.L01044 Erythranthe guttata HOM05D000548 ORTHO05D001552 1.3e-08 63.5 100 39.0
Eucgr.B00741 Eucalyptus grandis HOM05D000548 ORTHO05D001552 1.3e-08 63.5 101 39.6
MD14G1228100 Malus domestica HOM05D000548 ORTHO05D001552 1.3e-08 63.5 101 39.6
CARHR093650 Cardamine hirsuta HOM05D000548 ORTHO05D001552 1.7e-08 63.2 101 40.6
Prupe.5G223100 Prunus persica HOM05D000548 ORTHO05D001552 2.2e-08 62.8 109 37.6
TPR.G32705 Trifolium pratense HOM05D000548 ORTHO05D001552 2.2e-08 62.8 99 38.4
CiPaw.15G132100 Carya illinoinensis HOM05D000548 ORTHO05D001552 2.8e-08 62.4 101 38.6
Duzib068G0486 Durio zibethinus HOM05D000548 ORTHO05D001552 2.8e-08 62.4 107 36.4
Hma1.2p1_0653F.1_g196160 Hydrangea macrophylla HOM05D000548 ORTHO05D001552 2.8e-08 62.4 99 39.4
Peaxi162Scf00753g00119 Petunia axillaris HOM05D000548 ORTHO05D001552 2.8e-08 62.4 101 37.6
Sp3g16420 Schrenkiella parvula HOM05D000548 ORTHO05D001552 2.8e-08 62.4 102 42.2
arahy.Tifrunner.gnm1.ann1.JFG0L8 Arachis hypogaea HOM05D000548 ORTHO05D001552 3.7e-08 62.0 101 38.6
HanXRQChr11g0341021 Helianthus annuus HOM05D000548 ORTHO05D001552 3.7e-08 62.0 137 35.0
AUR62002840 Chenopodium quinoa HOM05D000548 ORTHO05D001552 4.9e-08 61.6 85 44.7
AUR62037305 Chenopodium quinoa HOM05D000548 ORTHO05D001552 4.9e-08 61.6 85 44.7
Thhalv10019915m.g Eutrema salsugineum HOM05D000548 ORTHO05D001552 4.9e-08 61.6 101 40.6
Lsat_1_v5_gn_4_175181 Lactuca sativa HOM05D000548 ORTHO05D011740 4.9e-08 61.6 104 35.6
Pp3c25_14500 Physcomitrium patens HOM05D000548 ORTHO05D001552 4.9e-08 61.6 92 40.2
Pp3c25_14501 Physcomitrium patens HOM05D000548 ORTHO05D001552 4.9e-08 61.6 92 40.2
Zm00001eb294920 Zea mays HOM05D000548 ORTHO05D001552 4.9e-08 61.6 78 41.0
ECA233G4080 Erigeron canadensis HOM05D000548 ORTHO05D001552 6.3e-08 61.2 59 50.8
Lj4g0027138 Lotus japonicus HOM05D000548 ORTHO05D001552 8.3e-08 60.8 101 35.6
Os05g0551000 Oryza sativa ssp. japonica HOM05D000548 ORTHO05D001552 8.3e-08 60.8 78 43.6
Potri.012G055100 Populus trichocarpa HOM05D000548 ORTHO05D001552 8.3e-08 60.8 82 40.2
AT3G18290 Arabidopsis thaliana HOM05D000548 ORTHO05D001552 1.1e-07 60.5 101 39.6
EL10Ac6g14339 Beta vulgaris HOM05D000548 ORTHO05D001552 1.1e-07 60.5 83 44.6
Migut.E00361 Erythranthe guttata HOM05D000548 ORTHO05D001552 1.1e-07 60.5 132 33.3
Lsat_1_v5_gn_8_40260 Lactuca sativa HOM05D000548 ORTHO05D001552 1.1e-07 60.5 66 45.5
HPP92_011525 Vanilla planifolia HOM05D000548 ORTHO05D001552 1.4e-07 60.1 76 44.7
CDE06G1538 Ceratophyllum demersum HOM05D000548 ORTHO05D001552 1.8e-07 59.7 59 54.2
Cc11_g09850 Coffea canephora HOM05D000548 ORTHO05D001552 1.8e-07 59.7 58 50.0
Sabra12G0038800 Salix brachista HOM05D000548 ORTHO05D001552 1.8e-07 59.7 82 40.2
AL3G31530 Arabidopsis lyrata HOM05D000548 ORTHO05D001552 2.4e-07 59.3 101 38.6
Oeu057740.1 Olea europaea HOM05D000548 ORTHO05D001552 2.4e-07 59.3 58 50.0
Phvul.002G317800 Phaseolus vulgaris HOM05D000548 ORTHO05D001552 2.4e-07 59.3 103 37.9
PGR119G0673 Punica granatum HOM05D000548 ORTHO05D001552 2.4e-07 59.3 144 31.2
VMungo0251G1368 Vigna mungo HOM05D000548 ORTHO05D001552 2.4e-07 59.3 103 37.9
Atru.chr9.870 Acer truncatum HOM05D000548 ORTHO05D001552 3.1e-07 58.9 99 38.4
Nitab4.5_0002906g0130 Nicotiana tabacum HOM05D000548 ORTHO05D001552 3.1e-07 58.9 89 41.6
Nitab4.5_0003433g0060 Nicotiana tabacum HOM05D000548 ORTHO05D001552 3.1e-07 58.9 89 41.6
PGR083G1736 Punica granatum HOM05D000548 ORTHO05D001552 3.1e-07 58.9 101 37.6
HPP92_006398 Vanilla planifolia HOM05D000548 ORTHO05D001552 3.1e-07 58.9 72 47.2
CsaV3_5G034480 Cucumis sativus L. HOM05D000548 ORTHO05D001552 4.1e-07 58.5 70 48.6
SEGI_28985 Sequoiadendron giganteum HOM05D000548 ORTHO05D001552 4.1e-07 58.5 76 44.7
unitig_8.g3435 Utricularia gibba HOM05D000548 ORTHO05D001552 4.1e-07 58.5 60 48.3
Aa31LG8G5150 Aethionema arabicum HOM05D000548 ORTHO05D001552 5.4e-07 58.2 99 38.4
arahy.Tifrunner.gnm1.ann1.T3N7AF Arachis hypogaea HOM05D000548 ORTHO05D001552 5.4e-07 58.2 101 37.6
Gohir.D11G004400 Gossypium hirsutum HOM05D000548 ORTHO05D001552 5.4e-07 58.2 139 32.4
Gorai.007G005400 Gossypium raimondii HOM05D000548 ORTHO05D001552 5.4e-07 58.2 139 32.4
CAN.G1425.22 Capsicum annuum HOM05D000548 ORTHO05D001552 7.0e-07 57.8 89 41.6
Eucgr.G02303 Eucalyptus grandis HOM05D000548 ORTHO05D001552 7.0e-07 57.8 85 40.0
BcaB04g20777 Brassica carinata HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
BcaC09g48790 Brassica carinata HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
A01p36030 Brassica napus HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
C01p45880 Brassica napus HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
BolC1t04550H Brassica oleracea HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
BraA01t03682Z Brassica rapa HOM05D000548 ORTHO05D001552 9.2e-07 57.4 59 49.2
Carub.0003s1807 Capsella rubella HOM05D000548 ORTHO05D001552 9.2e-07 57.4 101 37.6
Glyma.09G115100 Glycine max HOM05D000548 ORTHO05D001552 9.2e-07 57.4 85 38.8
Peaxi162Scf00683g00026 Petunia axillaris HOM05D000548 ORTHO05D001552 9.2e-07 57.4 89 41.6
Gohir.A11G005100 Gossypium hirsutum HOM05D000548 ORTHO05D001552 1.2e-06 57.0 139 32.4
QL10p025720 Quercus lobata HOM05D000548 ORTHO05D001552 1.2e-06 57.0 103 37.9
Glyma.09G182600 Glycine max HOM05D000548 ORTHO05D001552 1.6e-06 56.6 130 33.8
Medtr6g083900 Medicago truncatula HOM05D000548 ORTHO05D001552 1.6e-06 56.6 121 36.4
Zm00001eb156300 Zea mays HOM05D000548 ORTHO05D001552 1.6e-06 56.6 73 45.2
Lj2g0022269 Lotus japonicus HOM05D000548 ORTHO05D001552 2.0e-06 56.2 90 40.0
Zm00001eb360580 Zea mays HOM05D000548 ORTHO05D001552 2.0e-06 56.2 75 44.0
Mapoly0021s0025 Marchantia polymorpha HOM05D000548 ORTHO05D001552 2.7e-06 55.8 150 31.3
Sed0008110 Sechium edule HOM05D000548 ORTHO05D001552 2.7e-06 55.8 89 41.6
MELO3C012265.2 Cucumis melo HOM05D000548 ORTHO05D001552 3.5e-06 55.5 70 44.3
Solyc05g009150.4 Solanum lycopersicum HOM05D000548 ORTHO05D001552 3.5e-06 55.5 116 35.3
VMungo0464G0419 Vigna mungo HOM05D000548 ORTHO05D001552 3.5e-06 55.5 94 37.2
THA.LOC104809834 Tarenaya hassleriana HOM05D000548 ORTHO05D001552 4.5e-06 55.1 59 47.5
Phvul.004G156022 Phaseolus vulgaris HOM05D000548 ORTHO05D001552 5.9e-06 54.7 130 32.3
Psat1g036240 Pisum sativum HOM05D000548 ORTHO05D001552 5.9e-06 54.7 87 40.2
Glyma.07G093700 Glycine max HOM05D000548 ORTHO05D001552 7.7e-06 54.3 89 37.1
Lalb_Chr22g0353151 Lupinus albus HOM05D000548 ORTHO05D001552 7.7e-06 54.3 59 47.5
Solyc03g119300.4 Solanum lycopersicum HOM05D000548 ORTHO05D001552 7.7e-06 54.3 89 40.4


User provided reference genes

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