Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.4e-75 286.2 143 100.0
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 2.5e-40 169.1 115 73.9
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 5.5e-40 167.9 100 82.0
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.2e-39 166.8 100 80.0
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 8.0e-39 164.1 134 61.2
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.0e-38 163.7 127 65.4
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 6.8e-38 161.0 134 62.7
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.0e-37 159.5 99 78.8
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 7.5e-37 157.5 116 72.4
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 9.8e-37 157.1 155 57.4
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.2e-36 156.0 133 63.9
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 2.2e-36 156.0 100 75.0
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.8e-36 155.6 125 63.2
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 6.3e-36 154.5 98 76.5
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 8.3e-36 154.1 101 75.2
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 8.3e-36 154.1 128 63.3
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.4e-35 153.3 98 75.5
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.8e-35 152.9 97 75.3
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 2.4e-35 152.5 99 73.7
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.1e-35 152.1 101 72.3
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 5.4e-35 151.4 134 58.2
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 7.0e-35 151.0 129 61.2
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 2.0e-34 149.4 136 58.8
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 2.0e-34 149.4 149 53.7
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 2.7e-34 149.1 157 54.1
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.5e-34 148.3 113 63.7
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.5e-34 148.3 113 63.7
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 5.9e-34 147.9 126 61.1
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 7.8e-34 147.5 131 57.3
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.8e-34 147.5 131 57.3
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.0e-33 147.1 98 72.4
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.0e-33 147.1 99 68.7
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.0e-33 147.1 125 58.4
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.3e-33 146.7 131 60.3
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.7e-33 146.4 113 62.8
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 1.7e-33 146.4 137 56.9
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.7e-33 146.4 133 57.9
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 2.3e-33 146.0 128 60.9
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 2.3e-33 146.0 112 66.1
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 2.3e-33 146.0 102 70.6
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.8e-33 145.2 99 72.7
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 5.0e-33 144.8 102 70.6
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 5.0e-33 144.8 157 52.9
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 6.6e-33 144.4 126 61.1
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 8.6e-33 144.1 113 62.8
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.1e-32 143.7 136 57.4
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.5e-32 143.3 127 60.6
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.9e-32 142.9 112 64.3
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 1.9e-32 142.9 136 59.6
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 3.3e-32 142.1 99 68.7
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.3e-32 142.1 99 71.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 3.3e-32 142.1 100 71.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 5.6e-32 141.4 100 71.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 7.3e-32 141.0 114 63.2
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 7.3e-32 141.0 128 59.4
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.2e-31 140.2 101 68.3
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 2.1e-31 139.4 124 61.3
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 2.1e-31 139.4 147 53.1
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 6.1e-31 137.9 144 52.1
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 6.1e-31 137.9 120 60.0
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 8.0e-31 137.5 99 68.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.0e-30 137.1 99 69.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.8e-30 136.3 99 69.7
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.3e-30 136.0 100 66.0
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 3.0e-30 135.6 99 68.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 3.0e-30 135.6 99 68.7
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 4.0e-30 135.2 132 56.8
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 4.0e-30 135.2 127 57.5
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 5.2e-30 134.8 136 58.1
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 6.8e-30 134.4 97 66.0
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.2e-29 133.7 122 59.0
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.2e-29 133.7 189 45.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 4.4e-29 131.7 122 59.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.5e-29 131.0 101 64.4
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 9.8e-29 130.6 100 67.0
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 9.8e-29 130.6 106 64.2
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.3e-28 130.2 113 60.2
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.3e-28 130.2 99 67.7
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.3e-28 130.2 134 56.7
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 3.7e-28 128.6 88 71.6
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 3.7e-28 128.6 131 55.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 8.3e-28 127.5 127 56.7
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.1e-27 127.1 85 70.6
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 5.4e-27 124.8 100 66.0
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 7.0e-27 124.4 124 54.8
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 7.0e-27 124.4 124 54.8
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 7.0e-27 124.4 98 62.2
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 1.6e-26 123.2 124 56.5
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.0e-26 122.9 102 62.7
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 2.7e-26 122.5 94 67.0
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 3.5e-26 122.1 101 59.4
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 6.8e-22 107.8 101 53.5
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 5.8e-21 104.8 62 74.2
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 9.8e-21 104.0 127 47.2
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 9.8e-21 104.0 99 53.5
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 8.3e-20 100.9 105 55.2
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.0e-17 94.0 156 41.0
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.0e-17 92.4 84 57.1
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 4.7e-15 85.1 88 54.5
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-14 84.0 59 66.1
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 1.1e-14 84.0 63 68.3
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-13 79.3 61 63.9
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 7.5e-13 77.8 101 49.5
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 1.3e-12 77.0 83 47.0
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 6.4e-12 74.7 73 60.3
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.1e-11 73.9 83 45.8
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-07 60.5 53 56.6


User provided reference genes

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