Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g39904_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 2.8e-35 151.4 74 100.0
MBI11_g43863_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 2.8e-35 151.4 74 100.0
MBI11_g41070_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 4.4e-33 144.1 74 95.9
MBI11_g09870_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.7e-32 142.1 74 94.6
MBI18_g03887_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 1.7e-32 142.1 73 94.5
MBI11_g41071_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 2.9e-32 141.4 74 93.2
MBI11_g09044_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 3.3e-28 127.9 73 87.7
PSO170G1939 Papaver somniferum HOM05D003479 ORTHO05D004659 2.1e-27 125.2 73 78.1
TAR636G1704 Trochodendron aralioides HOM05D003479 ORTHO05D004659 4.8e-27 124.0 73 79.5
PSO357G0518 Papaver somniferum HOM05D003479 ORTHO05D004659 6.2e-27 123.6 73 78.1
CiPaw.08G080000 Carya illinoinensis HOM05D003479 ORTHO05D004659 2.4e-26 121.7 73 78.1
SGA_v2.0_scaffold80G25672 Striga asiatica HOM05D003479 ORTHO05D004659 9.0e-26 119.8 73 74.0
Migut.D00003 Erythranthe guttata HOM05D003479 ORTHO05D004659 1.5e-25 119.0 73 75.3
Rhsim01G0001400 Rhododendron simsii HOM05D003479 ORTHO05D004659 1.5e-25 119.0 73 75.3
Actinidia06417 Actinidia chinensis HOM05D003479 ORTHO05D004659 2.0e-25 118.6 73 74.0
vmacro02352 Vaccinium macrocarpon HOM05D003479 ORTHO05D004659 2.0e-25 118.6 73 75.3
Hund11617 Selenicereus undatus HOM05D003479 ORTHO05D004659 2.6e-25 118.2 73 76.7
SEGI_06113 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 2.6e-25 118.2 73 71.2
COL.COLO4_23088 Corchorus olitorius HOM05D003479 ORTHO05D004659 3.4e-25 117.9 73 75.3
Gohir.A11G103400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 3.4e-25 117.9 73 76.7
Gohir.D11G107800 Gossypium hirsutum HOM05D003479 ORTHO05D004659 3.4e-25 117.9 73 76.7
Gorai.007G115700 Gossypium raimondii HOM05D003479 ORTHO05D004659 3.4e-25 117.9 73 76.7
Thecc.01G328500 Theobroma cacao HOM05D003479 ORTHO05D004659 3.4e-25 117.9 73 75.3
Atru.chr5.824 Acer truncatum HOM05D003479 ORTHO05D004659 4.4e-25 117.5 73 75.3
CSS0000124 Camellia sinensis var. sinensis HOM05D003479 ORTHO05D004659 5.8e-25 117.1 73 74.0
Cpa.g.sc57.54 Carica papaya HOM05D003479 ORTHO05D004659 5.8e-25 117.1 73 75.3
Haze_05171 Corylus avellana HOM05D003479 ORTHO05D004659 5.8e-25 117.1 73 75.3
ATR0693G109 Amborella trichopoda HOM05D003479 ORTHO05D004659 7.6e-25 116.7 73 72.6
Cfa004931 Carpinus fangiana HOM05D003479 ORTHO05D004659 7.6e-25 116.7 73 75.3
DCAR_018236 Daucus carota HOM05D003479 ORTHO05D004659 7.6e-25 116.7 73 74.0
GSVIVG01028271001 Vitis vinifera HOM05D003479 ORTHO05D004659 9.9e-25 116.3 73 74.0
Aqoxy5G02886 Aquilegia oxysepala HOM05D003479 ORTHO05D004659 1.3e-24 115.9 73 75.3
CiPaw.07G128000 Carya illinoinensis HOM05D003479 ORTHO05D004659 1.3e-24 115.9 73 74.0
Ciclev10018541m.g Citrus clementina HOM05D003479 ORTHO05D004659 1.3e-24 115.9 73 74.0
Sc05g0000020 Simmondsia chinensis HOM05D003479 ORTHO05D004659 1.3e-24 115.9 73 74.0
CANSAT25G3435 Cannabis sativa HOM05D003479 ORTHO05D004659 1.7e-24 115.5 73 74.0
RcHm_v2.0_Chr3g0485491 Rosa chinensis HOM05D003479 ORTHO05D004659 1.7e-24 115.5 73 76.7
TWI14G0833 Tripterygium wilfordii HOM05D003479 ORTHO05D004659 1.7e-24 115.5 73 72.6
Gohir.A08G035200 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.2e-24 115.2 73 74.0
Gohir.D08G045832 Gossypium hirsutum HOM05D003479 ORTHO05D004659 2.2e-24 115.2 73 74.0
Gorai.004G044600 Gossypium raimondii HOM05D003479 ORTHO05D004659 2.2e-24 115.2 73 74.0
ClCG06G004120 Citrullus lanatus HOM05D003479 ORTHO05D004659 2.9e-24 114.8 73 71.2
Oeu052594.2 Olea europaea HOM05D003479 ORTHO05D004659 2.9e-24 114.8 73 74.0
QL09p037617 Quercus lobata HOM05D003479 ORTHO05D004659 2.9e-24 114.8 73 74.0
CsaV3_6G000310 Cucumis sativus L. HOM05D003479 ORTHO05D004659 3.8e-24 114.4 73 71.2
Gohir.D08G143700 Gossypium hirsutum HOM05D003479 ORTHO05D004659 3.8e-24 114.4 73 75.3
Gorai.004G148300 Gossypium raimondii HOM05D003479 ORTHO05D004659 3.8e-24 114.4 73 75.3
MD17G1285800 Malus domestica HOM05D003479 ORTHO05D004659 3.8e-24 114.4 73 75.3
Manes.01G236800 Manihot esculenta HOM05D003479 ORTHO05D004659 3.8e-24 114.4 73 71.2
Lalb_Chr04g0260231 Lupinus albus HOM05D003479 ORTHO05D004659 4.9e-24 114.0 73 72.6
Potri.014G109900 Populus trichocarpa HOM05D003479 ORTHO05D004659 4.9e-24 114.0 73 71.2
THA.LOC104817410 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 4.9e-24 114.0 73 71.2
FvH4_1g26030 Fragaria vesca HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 75.3
FAN19G1496 Fragaria x ananassa HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 75.3
FAN23G1814 Fragaria x ananassa HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 75.3
FAN23G2105 Fragaria x ananassa HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 75.3
Lju2566C1G2 Lonicera japonica HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 71.2
Psat3g015760 Pisum sativum HOM05D003479 ORTHO05D004659 6.4e-24 113.6 73 72.6
AUR62011690 Chenopodium quinoa HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 69.9
AUR62024549 Chenopodium quinoa HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 69.9
DCAR_012290 Daucus carota HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 71.2
Duzib138G1436 Durio zibethinus HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 74.0
Nn4g25261 Nelumbo nucifera HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 71.2
Peaxi162Scf00309g00510 Petunia axillaris HOM05D003479 ORTHO05D004659 8.4e-24 113.2 73 69.9
Gohir.A08G122400 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.1e-23 112.8 73 75.3
Prupe.3G000300 Prunus persica HOM05D003479 ORTHO05D004659 1.1e-23 112.8 73 74.0
MELO3C021223.2 Cucumis melo HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 69.9
Dinv12068 Davidia involucrata HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 71.2
Glyma.03G226200 Glycine max HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 71.2
Glyma.19G223200 Glycine max HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 71.2
Nitab4.5_0001628g0060 Nicotiana tabacum HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 69.9
Nitab4.5_0002103g0090 Nicotiana tabacum HOM05D003479 ORTHO05D004659 1.4e-23 112.5 73 69.9
FAN28G1829 Fragaria x ananassa HOM05D003479 ORTHO05D004659 1.9e-23 112.1 73 74.0
Lalb_Chr18g0046291 Lupinus albus HOM05D003479 ORTHO05D004659 2.4e-23 111.7 73 71.2
Sed0010094 Sechium edule HOM05D003479 ORTHO05D004659 2.4e-23 111.7 73 69.9
EL10As5g23623 Beta vulgaris HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 65.8
Glyma.20G089300 Glycine max HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 71.2
HanXRQChr15g0464511 Helianthus annuus HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 67.1
Phvul.001G220000 Phaseolus vulgaris HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 69.9
Solyc01g068590.4 Solanum lycopersicum HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 69.9
Sopen01g030540 Solanum pennellii HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 69.9
VMungo1383G0820 Vigna mungo HOM05D003479 ORTHO05D004659 3.2e-23 111.3 73 69.9
Medtr7g111030 Medicago truncatula HOM05D003479 ORTHO05D004659 5.4e-23 110.5 73 69.9
Sabra14G0081100 Salix brachista HOM05D003479 ORTHO05D004659 5.4e-23 110.5 73 67.1
ECA247G3194 Erigeron canadensis HOM05D003479 ORTHO05D004659 7.1e-23 110.2 73 67.1
Eucgr.K00546 Eucalyptus grandis HOM05D003479 ORTHO05D004659 7.1e-23 110.2 73 71.2
Glyma.10G140500 Glycine max HOM05D003479 ORTHO05D004659 7.1e-23 110.2 73 71.2
unitig_578.g16647 Utricularia gibba HOM05D003479 ORTHO05D004659 9.3e-23 109.8 73 67.1
FAN26G2262 Fragaria x ananassa HOM05D003479 ORTHO05D004659 1.2e-22 109.4 73 72.6
TPR.G3092 Trifolium pratense HOM05D003479 ORTHO05D004659 1.2e-22 109.4 73 69.9
Cc01_g21710 Coffea canephora HOM05D003479 ORTHO05D004659 1.6e-22 109.0 73 69.9
Eucgr.K00763 Eucalyptus grandis HOM05D003479 ORTHO05D004659 1.6e-22 109.0 73 71.2
THA.LOC104802111 Tarenaya hassleriana HOM05D003479 ORTHO05D004659 1.6e-22 109.0 73 68.5
AagrBONN_evm.TU.Sc2ySwM_344.258 Anthoceros agrestis HOM05D003479 ORTHO05D004659 3.5e-22 107.8 73 63.0
arahy.Tifrunner.gnm1.ann1.37N44H Arachis hypogaea HOM05D003479 ORTHO05D004659 3.5e-22 107.8 73 67.1
arahy.Tifrunner.gnm1.ann1.RIE5PZ Arachis hypogaea HOM05D003479 ORTHO05D004659 3.5e-22 107.8 73 67.1
Ca_10221_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 3.5e-22 107.8 73 69.9
Ca_09257_v3 Cicer arietinum L. HOM05D003479 ORTHO05D004659 6.0e-22 107.1 73 67.1
Potri.002G184400 Populus trichocarpa HOM05D003479 ORTHO05D004659 1.0e-21 106.3 72 65.3
AL5G44630 Arabidopsis lyrata HOM05D003479 ORTHO05D004659 1.3e-21 105.9 73 67.1
Gohir.A11G116300 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.3e-21 105.9 73 67.1
Medtr1g085300 Medicago truncatula HOM05D003479 ORTHO05D004659 1.3e-21 105.9 73 68.5
Pp3c5_15420 Physcomitrium patens HOM05D003479 ORTHO05D004659 1.3e-21 105.9 73 61.6
Pp3c25_5940 Physcomitrium patens HOM05D003479 ORTHO05D004659 1.7e-21 105.5 73 63.0
Lj5g0020342 Lotus japonicus HOM05D003479 ORTHO05D004659 3.0e-21 104.8 73 67.1
Psat6g157360 Pisum sativum HOM05D003479 ORTHO05D004659 3.0e-21 104.8 73 67.1
AT3G62010 Arabidopsis thaliana HOM05D003479 ORTHO05D004659 3.9e-21 104.4 73 65.8
CARHR172360 Cardamine hirsuta HOM05D003479 ORTHO05D004659 3.9e-21 104.4 73 65.8
Sp5g01350 Schrenkiella parvula HOM05D003479 ORTHO05D004659 3.9e-21 104.4 73 65.8
SMO367G0831 Selaginella moellendorffii HOM05D003479 ORTHO05D004659 3.9e-21 104.4 73 65.8
Lsat_1_v5_gn_9_7140 Lactuca sativa HOM05D003479 ORTHO05D004659 5.1e-21 104.0 73 63.0
BcaC07g40697 Brassica carinata HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
A09p54080 Brassica napus HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
C08p36970 Brassica napus HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
BolC8t51274H Brassica oleracea HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
BraA09t40821Z Brassica rapa HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
Carub.0005s2876 Capsella rubella HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
Thhalv10005753m.g Eutrema salsugineum HOM05D003479 ORTHO05D004659 1.1e-20 102.8 73 64.4
HPP92_010564 Vanilla planifolia HOM05D003479 ORTHO05D004659 1.9e-20 102.1 73 63.0
Mapoly0022s0091 Marchantia polymorpha HOM05D003479 ORTHO05D004659 3.3e-20 101.3 73 64.4
CDE11G0667 Ceratophyllum demersum HOM05D003479 ORTHO05D004659 9.6e-20 99.8 73 67.1
Zm00001eb049240 Zea mays HOM05D003479 ORTHO05D004659 3.6e-19 97.8 73 61.6
Gohir.D08G045766 Gossypium hirsutum HOM05D003479 ORTHO05D004659 1.4e-18 95.9 73 67.1
Aa31LG10G15990 Aethionema arabicum HOM05D003479 ORTHO05D004659 1.8e-18 95.5 68 63.2
Os03g0586700 Oryza sativa ssp. japonica HOM05D003479 ORTHO05D004659 2.4e-18 95.1 73 60.3
Ah.02g112690 Amaranthus hybridus HOM05D003479 ORTHO05D004659 4.5e-17 90.9 65 64.6
QL09p037594 Quercus lobata HOM05D003479 ORTHO05D004659 4.6e-14 80.9 53 71.7
BcaC09g50076 Brassica carinata HOM05D003479 ORTHO05D004659 8.1e-11 70.1 57 56.1
C01p29360 Brassica napus HOM05D003479 ORTHO05D004659 8.1e-11 70.1 57 56.1
BolC1t02872H Brassica oleracea HOM05D003479 ORTHO05D004659 8.1e-11 70.1 57 56.1
MBI11_g09451_MAGBIO Magnolia biondii HOM05D003479 ORTHO05D004659 8.1e-11 70.1 38 92.1
A01p23620 Brassica napus HOM05D003479 ORTHO05D004659 6.9e-10 67.0 57 54.4
Cre01.g054800 Chlamydomonas reinhardtii HOM05D003479 ORTHO05D004659 2.0e-09 65.5 73 42.5
HPP92_010563 Vanilla planifolia HOM05D003479 ORTHO05D004659 7.6e-09 63.5 73 41.1
BcaC07g42626 Brassica carinata HOM05D003479 ORTHO05D004659 6.5e-08 60.5 73 39.7
Rhsim01G0001500 Rhododendron simsii HOM05D003479 ORTHO05D004659 8.4e-08 60.1 73 39.7
TPR.G23936 Trifolium pratense HOM05D003479 ORTHO05D004659 1.4e-07 59.3 74 40.5
AUR62024550 Chenopodium quinoa HOM05D003479 ORTHO05D004659 1.9e-07 58.9 73 39.7
SEGI_16825 Sequoiadendron giganteum HOM05D003479 ORTHO05D004659 9.3e-07 56.6 73 39.7
Eucgr.K00541 Eucalyptus grandis HOM05D003479 ORTHO05D004659 3.5e-06 54.7 76 39.5
MD09G1292000 Malus domestica HOM05D003479 ORTHO05D004659 6.0e-06 53.9 36 69.4


User provided reference genes

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