Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g33503_MAGBIO Magnolia biondii HOM05D006123 ORTHO05D007578 2.8e-59 231.9 129 100.0
Nn3g16171 Nelumbo nucifera HOM05D006123 ORTHO05D007578 1.5e-23 113.2 127 53.5
Manes.08G098100 Manihot esculenta HOM05D006123 ORTHO05D007578 3.3e-23 112.1 105 56.2
TAR374G1410 Trochodendron aralioides HOM05D006123 ORTHO05D007578 9.5e-23 110.5 120 52.5
TWI36G1213 Tripterygium wilfordii HOM05D006123 ORTHO05D007578 1.0e-21 107.1 92 58.7
Cpa.g.sc252.15 Carica papaya HOM05D006123 ORTHO05D007578 1.8e-21 106.3 110 52.7
Potri.001G072200 Populus trichocarpa HOM05D006123 ORTHO05D007578 1.8e-21 106.3 103 56.3
Dinv07617 Davidia involucrata HOM05D006123 ORTHO05D007578 3.0e-21 105.5 118 50.8
PGR102G0396 Punica granatum HOM05D006123 ORTHO05D007578 3.0e-21 105.5 109 52.3
CSS0037190 Camellia sinensis var. sinensis HOM05D006123 ORTHO05D007578 1.5e-20 103.2 105 53.3
Ciclev10028563m.g Citrus clementina HOM05D006123 ORTHO05D007578 3.4e-20 102.1 112 54.5
Sc07g0008580 Simmondsia chinensis HOM05D006123 ORTHO05D007578 4.4e-20 101.7 111 51.4
Haze_12544 Corylus avellana HOM05D006123 ORTHO05D007578 9.8e-20 100.5 113 52.2
Sabra01G0050800 Salix brachista HOM05D006123 ORTHO05D007578 9.8e-20 100.5 112 49.1
CiPaw.05G096700 Carya illinoinensis HOM05D006123 ORTHO05D007578 1.7e-19 99.8 111 47.7
Lsat_1_v5_gn_4_1741 Lactuca sativa HOM05D006123 ORTHO05D007578 1.7e-19 99.8 101 54.5
Atru.chr12.1487 Acer truncatum HOM05D006123 ORTHO05D007578 2.9e-19 99.0 111 55.9
Actinidia13519 Actinidia chinensis HOM05D006123 ORTHO05D007578 2.9e-19 99.0 94 57.4
Cc11_g14840 Coffea canephora HOM05D006123 ORTHO05D007578 6.4e-19 97.8 114 52.6
HPP92_025319 Vanilla planifolia HOM05D006123 ORTHO05D007578 1.1e-18 97.1 117 46.2
Gohir.A11G059600 Gossypium hirsutum HOM05D006123 ORTHO05D007578 1.8e-18 96.3 112 53.6
Gohir.D11G063700 Gossypium hirsutum HOM05D006123 ORTHO05D007578 1.8e-18 96.3 112 53.6
Duzib264G0674 Durio zibethinus HOM05D006123 ORTHO05D007578 3.2e-18 95.5 94 60.6
Gorai.007G068900 Gossypium raimondii HOM05D006123 ORTHO05D007578 5.4e-18 94.7 112 51.8
Sabra03G0115100 Salix brachista HOM05D006123 ORTHO05D007578 5.4e-18 94.7 112 50.9
HPP92_007055 Vanilla planifolia HOM05D006123 ORTHO05D007578 5.4e-18 94.7 111 49.5
Oeu036874.2 Olea europaea HOM05D006123 ORTHO05D007578 1.2e-17 93.6 92 55.4
HanXRQChr16g0516431 Helianthus annuus HOM05D006123 ORTHO05D007578 1.6e-17 93.2 116 46.6
Hund14375 Selenicereus undatus HOM05D006123 ORTHO05D007578 2.7e-17 92.4 120 45.0
Thecc.01G233200 Theobroma cacao HOM05D006123 ORTHO05D007578 2.7e-17 92.4 94 57.4
COL.COLO4_15650 Corchorus olitorius HOM05D006123 ORTHO05D007578 4.6e-17 91.7 116 49.1
EL10Ac5g12009 Beta vulgaris HOM05D006123 ORTHO05D007578 5.9e-17 91.3 116 50.0
AUR62007355 Chenopodium quinoa HOM05D006123 ORTHO05D007578 7.8e-17 90.9 111 47.7
ClCG06G001650 Citrullus lanatus HOM05D006123 ORTHO05D007578 1.3e-16 90.1 95 49.5
Hma1.2p1_0073F.1_g038620 Hydrangea macrophylla HOM05D006123 ORTHO05D007578 1.3e-16 90.1 94 56.4
Eucgr.B03575 Eucalyptus grandis HOM05D006123 ORTHO05D007578 3.9e-16 88.6 92 50.0
Ah.07g200930 Amaranthus hybridus HOM05D006123 ORTHO05D007578 8.6e-16 87.4 111 46.8
CsaV3_6G007640 Cucumis sativus L. HOM05D006123 ORTHO05D007578 2.5e-15 85.9 93 50.5
MBI07_g11054_MAGBIO Magnolia biondii HOM05D006123 ORTHO05D007578 3.3e-15 85.5 53 79.2
AL5G32490 Arabidopsis lyrata HOM05D006123 ORTHO05D007578 4.3e-15 85.1 117 43.6
BcaB01g00394 Brassica carinata HOM05D006123 ORTHO05D007578 9.5e-15 84.0 103 45.6
C08p27270 Brassica napus HOM05D006123 ORTHO05D007578 1.2e-14 83.6 101 46.5
BolC8t50344H Brassica oleracea HOM05D006123 ORTHO05D007578 1.2e-14 83.6 101 46.5
BcaB01g00454 Brassica carinata HOM05D006123 ORTHO05D007578 1.6e-14 83.2 101 46.5
Lalb_Chr12g0202061 Lupinus albus HOM05D006123 ORTHO05D007578 2.1e-14 82.8 115 42.6
CARHR161640 Cardamine hirsuta HOM05D006123 ORTHO05D007578 2.8e-14 82.4 99 46.5
RcHm_v2.0_Chr4g0428181 Rosa chinensis HOM05D006123 ORTHO05D007578 2.8e-14 82.4 105 41.9
A09p45080 Brassica napus HOM05D006123 ORTHO05D007578 3.6e-14 82.0 101 44.6
FvH4_4g21990 Fragaria vesca HOM05D006123 ORTHO05D007578 3.6e-14 82.0 110 40.9
FAN07G1474 Fragaria x ananassa HOM05D006123 ORTHO05D007578 3.6e-14 82.0 110 40.9
FAN12G4288 Fragaria x ananassa HOM05D006123 ORTHO05D007578 3.6e-14 82.0 110 40.9
AT3G51980 Arabidopsis thaliana HOM05D006123 ORTHO05D007578 4.7e-14 81.6 115 40.9
BraA09t39969Z Brassica rapa HOM05D006123 ORTHO05D007578 4.7e-14 81.6 101 44.6
Phvul.006G013100 Phaseolus vulgaris HOM05D006123 ORTHO05D007578 4.7e-14 81.6 124 42.7
Sp5g10290 Schrenkiella parvula HOM05D006123 ORTHO05D007578 6.2e-14 81.3 88 50.0
Lj6g0015569 Lotus japonicus HOM05D006123 ORTHO05D007578 1.1e-13 80.5 112 47.3
CDE07G0286 Ceratophyllum demersum HOM05D006123 ORTHO05D007578 1.4e-13 80.1 113 45.1
MD13G1135300 Malus domestica HOM05D006123 ORTHO05D007578 1.8e-13 79.7 100 48.0
Sed0027865 Sechium edule HOM05D006123 ORTHO05D007578 2.3e-13 79.3 99 43.4
Os09g0512700 Oryza sativa ssp. japonica HOM05D006123 ORTHO05D007578 3.1e-13 79.0 99 50.5
THA.LOC104823032 Tarenaya hassleriana HOM05D006123 ORTHO05D007578 3.1e-13 79.0 51 70.6
Carub.0005s1833 Capsella rubella HOM05D006123 ORTHO05D007578 4.0e-13 78.6 115 40.0
QL03p046914 Quercus lobata HOM05D006123 ORTHO05D007578 4.0e-13 78.6 84 51.2
Aqoxy6G00002 Aquilegia oxysepala HOM05D006123 ORTHO05D007578 6.8e-13 77.8 52 69.2
VMungo0540G0877 Vigna mungo HOM05D006123 ORTHO05D007578 8.9e-13 77.4 104 47.1
MELO3C022368.2 Cucumis melo HOM05D006123 ORTHO05D007578 1.2e-12 77.0 95 45.3
Potri.003G158701 Populus trichocarpa HOM05D006123 ORTHO05D007578 1.2e-12 77.0 116 41.4
Aa31LG10G7030 Aethionema arabicum HOM05D006123 ORTHO05D007578 1.5e-12 76.6 88 47.7
ATR0582G035 Amborella trichopoda HOM05D006123 ORTHO05D007578 2.0e-12 76.3 84 53.6
Mapoly0124s0025 Marchantia polymorpha HOM05D006123 ORTHO05D007578 2.6e-12 75.9 97 41.2
TPR.G310 Trifolium pratense HOM05D006123 ORTHO05D007578 2.6e-12 75.9 120 42.5
Glyma.20G054300 Glycine max HOM05D006123 ORTHO05D007578 3.4e-12 75.5 111 45.9
Medtr3g080080 Medicago truncatula HOM05D006123 ORTHO05D007578 7.5e-12 74.3 111 43.2
Migut.K01149 Erythranthe guttata HOM05D006123 ORTHO05D007578 9.8e-12 73.9 52 69.2
SEGI_34276 Sequoiadendron giganteum HOM05D006123 ORTHO05D007578 1.3e-11 73.6 111 40.5
BcaB01g00386 Brassica carinata HOM05D006123 ORTHO05D007578 1.7e-11 73.2 96 42.7
Prupe.1G210000 Prunus persica HOM05D006123 ORTHO05D007578 1.7e-11 73.2 87 46.0
Zm00001eb318160 Zea mays HOM05D006123 ORTHO05D007578 6.4e-11 71.2 51 70.6
CAN.G624.16 Capsicum annuum HOM05D006123 ORTHO05D007578 8.3e-11 70.9 52 61.5
PSO478G0970 Papaver somniferum HOM05D006123 ORTHO05D007578 1.1e-10 70.5 79 51.9
SalBow2G0521 Salvia bowleyana HOM05D006123 ORTHO05D007578 1.1e-10 70.5 46 69.6
Solyc04g009320.3 Solanum lycopersicum HOM05D006123 ORTHO05D007578 1.1e-10 70.5 51 64.7
PGSC0003DMG400013211 Solanum tuberosum HOM05D006123 ORTHO05D007578 1.1e-10 70.5 51 64.7
PGSC0003DMG400032561 Solanum tuberosum HOM05D006123 ORTHO05D007578 1.1e-10 70.5 51 64.7
Nitab4.5_0002113g0090 Nicotiana tabacum HOM05D006123 ORTHO05D007578 2.4e-10 69.3 51 64.7
Sopen04g004440 Solanum pennellii HOM05D006123 ORTHO05D007578 3.2e-10 68.9 49 65.3
Psat5g111880 Pisum sativum HOM05D006123 ORTHO05D007578 7.0e-10 67.8 112 42.9
arahy.Tifrunner.gnm1.ann1.9L3MVK Arachis hypogaea HOM05D006123 ORTHO05D007578 2.0e-09 66.2 100 45.0
arahy.Tifrunner.gnm1.ann1.BTS312 Arachis hypogaea HOM05D006123 ORTHO05D007578 2.0e-09 66.2 100 45.0
arahy.Tifrunner.gnm1.ann1.XG2HYZ Arachis hypogaea HOM05D006123 ORTHO05D007578 2.0e-09 66.2 100 45.0
SEGI_37385 Sequoiadendron giganteum HOM05D006123 ORTHO05D007578 2.0e-09 66.2 51 58.8
unitig_749.g13336 Utricularia gibba HOM05D006123 ORTHO05D007578 2.0e-09 66.2 90 46.7
ECA234G2504 Erigeron canadensis HOM05D006123 ORTHO05D007578 2.7e-09 65.9 48 60.4
DCAR_023486 Daucus carota HOM05D006123 ORTHO05D007578 6.0e-09 64.7 127 35.4
SGA_v2.0_scaffold258G45757 Striga asiatica HOM05D006123 ORTHO05D007578 1.0e-08 63.9 117 43.6
GSVIVG01001139001 Vitis vinifera HOM05D006123 ORTHO05D007578 1.7e-08 63.2 37 81.1
SMO367G0194 Selaginella moellendorffii HOM05D006123 ORTHO05D007578 2.3e-08 62.8 121 36.4
Migut.H01174 Erythranthe guttata HOM05D006123 ORTHO05D007578 1.1e-07 60.5 39 74.4
Lj3C1079T4 Lonicera japonica HOM05D006123 ORTHO05D007578 4.3e-07 58.5 37 73.0
Pp3c20_2600 Physcomitrium patens HOM05D006123 ORTHO05D007578 4.3e-07 58.5 111 36.0
AUR62018637 Chenopodium quinoa HOM05D006123 ORTHO05D007578 3.6e-06 55.5 81 42.0


User provided reference genes

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