Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.3e-210 736.1 368 100.0
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 2.9e-133 479.2 281 82.9
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 2.3e-130 469.5 283 79.5
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 5.6e-129 464.9 283 76.3
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 3.7e-128 462.2 283 77.4
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.1e-127 460.7 283 78.8
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 1.2e-126 457.2 295 74.6
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 1.2e-126 457.2 283 75.6
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 1.5e-126 456.8 283 77.7
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 4.5e-126 455.3 283 78.4
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 1.0e-125 454.1 283 74.6
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.3e-125 453.8 283 74.2
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 2.2e-125 453.0 283 74.6
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 3.8e-125 452.2 281 77.9
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 3.8e-125 452.2 283 75.6
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 3.8e-125 452.2 293 73.0
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 6.5e-125 451.4 283 73.9
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 1.1e-124 450.7 283 77.4
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 4.2e-124 448.7 283 74.2
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 5.5e-124 448.4 293 72.7
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 3.5e-123 445.7 293 73.0
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 6.0e-123 444.9 284 74.3
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 6.7e-122 441.4 283 74.2
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 6.7e-122 441.4 283 74.2
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 1.5e-121 440.3 281 76.5
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 7.4e-121 438.0 284 74.3
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 9.7e-121 437.6 284 73.2
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.3e-120 437.2 281 75.8
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 2.8e-120 436.0 289 68.9
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 6.3e-120 434.9 285 74.4
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.8e-119 433.3 284 72.2
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 2.4e-119 433.0 289 70.2
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 3.1e-119 432.6 284 73.6
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 5.3e-119 431.8 283 74.9
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 5.3e-119 431.8 291 71.1
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 5.3e-119 431.8 286 71.7
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.2e-118 430.6 284 71.8
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 2.0e-118 429.9 298 68.8
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 3.4e-118 429.1 290 70.3
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 3.4e-118 429.1 289 69.6
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 5.9e-118 428.3 283 71.0
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 1.0e-117 427.6 289 69.9
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.7e-117 426.8 284 72.2
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 1.7e-117 426.8 286 68.9
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 2.9e-117 426.0 297 68.4
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 2.9e-117 426.0 287 71.4
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 3.8e-117 425.6 283 71.4
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 8.5e-117 424.5 283 71.0
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 1.1e-116 424.1 283 70.3
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.1e-116 424.1 283 70.3
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.4e-116 423.7 282 71.3
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.4e-116 423.7 283 69.6
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 4.2e-116 422.2 289 67.8
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 4.2e-116 422.2 283 70.0
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 1.2e-115 420.6 282 70.9
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.6e-115 420.2 283 69.3
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 2.1e-115 419.9 283 70.7
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 2.1e-115 419.9 283 68.9
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 3.6e-115 419.1 283 70.3
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 6.1e-115 418.3 284 70.8
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 7.9e-115 417.9 274 71.9
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 1.0e-114 417.5 283 67.8
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 1.8e-114 416.8 297 67.7
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 5.1e-114 415.2 343 60.6
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 6.7e-114 414.8 298 65.8
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 6.7e-114 414.8 284 70.1
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 1.5e-113 413.7 281 70.8
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 1.9e-113 413.3 284 71.5
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 2.5e-113 412.9 298 66.1
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 3.3e-113 412.5 284 70.4
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 4.3e-113 412.1 286 68.2
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 7.4e-113 411.4 285 67.7
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 7.4e-113 411.4 287 69.7
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 1.3e-112 410.6 304 64.5
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 1.7e-112 410.2 250 77.2
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 2.2e-112 409.8 298 65.4
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.8e-112 409.5 260 74.6
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 6.3e-112 408.3 298 64.8
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 6.9e-111 404.8 281 67.6
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 9.1e-111 404.4 283 67.5
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.2e-110 404.1 283 67.1
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 1.5e-110 403.7 298 64.4
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 4.5e-110 402.1 290 66.6
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 1.0e-109 401.0 298 64.1
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 3.8e-109 399.1 311 64.6
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.9e-108 396.7 299 64.5
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 4.2e-108 395.6 299 64.2
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 1.2e-107 394.0 299 63.9
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 5.1e-106 388.7 299 63.5
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 9.7e-105 384.4 285 61.4
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.2e-104 383.3 260 71.9
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.8e-103 380.2 291 64.9
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.0e-102 376.7 281 68.0
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 2.2e-96 356.7 247 68.0
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 3.1e-95 352.8 232 72.4
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 1.3e-93 347.4 300 59.0
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.5e-92 344.0 248 66.9
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 1.7e-85 320.5 282 55.3
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 2.2e-85 320.1 282 56.0
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.0e-82 311.2 286 56.6
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 5.7e-81 305.4 287 52.3
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 2.4e-79 300.1 167 84.4
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 5.4e-79 298.9 163 87.1
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 2.5e-76 290.0 169 78.1
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 3.6e-75 286.2 287 51.6
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 1.6e-70 270.8 285 46.0
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.1e-68 264.6 164 75.0
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 7.5e-57 225.3 149 70.5
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 2.9e-48 196.8 260 40.0
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.3e-44 183.0 103 81.6
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 2.9e-40 170.2 140 56.4
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 3.8e-40 169.9 100 80.0
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 1.9e-39 167.5 120 65.0
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 7.1e-39 165.6 266 34.6
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-38 164.1 192 44.3
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 3.1e-34 150.2 83 86.7
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 3.2e-31 140.2 293 33.1
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.0e-29 135.2 76 80.3
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 8.1e-27 125.6 120 48.3
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 1.5e-25 121.3 138 50.0
MBI11_g30564_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 4.2e-23 113.2 59 91.5
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.3e-19 101.7 69 72.5
MBI07_g28641_MAGBIO Magnolia biondii HOM05D000992 ORTHO05D001928 2.1e-14 84.3 51 82.4
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 3.5e-14 83.6 66 57.6
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 5.1e-13 79.7 74 56.8
COL.COLO4_29149 Corchorus olitorius HOM05D005198 ORTHO05D006839 1.1e-12 78.6 77 58.4
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 3.7e-11 73.6 43 74.4


User provided reference genes

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