Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g17411_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.1e-76 288.9 140 100.0
MBI11_g20063_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.4e-24 115.9 75 72.0
MBI11_g07704_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 4.8e-20 101.7 66 74.2
MBI11_g07703_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.0e-10 69.7 61 54.1
Aqoxy2G03856 Aquilegia oxysepala HOM05D000881 ORTHO05D000666 1.0e-09 67.4 62 48.4
CDE07G1560 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 1.0e-09 67.4 70 48.6
MBI11_g45239_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 1.3e-09 67.0 66 50.0
CDE04G2129 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 3.8e-09 65.5 70 47.1
MBI05_g04123_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 1.4e-08 63.5 61 47.5
MBI11_g17410_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.5e-08 62.8 58 50.0
Nn2g14496 Nelumbo nucifera HOM05D000881 ORTHO05D000666 2.5e-08 62.8 71 40.8
TAR623G1394 Trochodendron aralioides HOM05D000881 ORTHO05D000666 7.2e-08 61.2 61 42.6
Aqoxy2G00607 Aquilegia oxysepala HOM05D000881 ORTHO05D000666 1.2e-07 60.5 61 45.9
Os03g0157600 Oryza sativa ssp. japonica HOM05D000881 ORTHO05D000666 1.2e-07 60.5 53 45.3
Manes.04G055300 Manihot esculenta HOM05D000881 ORTHO05D000666 1.6e-07 60.1 62 43.5
Peaxi162Scf01021g00028 Petunia axillaris HOM05D000881 ORTHO05D000666 1.6e-07 60.1 58 51.7
Nitab4.5_0000157g0240 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.1e-07 59.7 58 48.3
Potri.004G191101 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.1e-07 59.7 61 41.0
Potri.004G191200 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.1e-07 59.7 61 41.0
Nitab4.5_0000157g0350 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.7e-07 59.3 58 48.3
CiPaw.14G092300 Carya illinoinensis HOM05D000881 ORTHO05D000666 3.6e-07 58.9 61 41.0
Peaxi162Scf00345g00410 Petunia axillaris HOM05D000881 ORTHO05D000666 3.6e-07 58.9 58 48.3
CDE01G0150 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 4.6e-07 58.5 58 44.8
LjContig00564g0024719 Lotus japonicus HOM05D000881 ORTHO05D000666 4.6e-07 58.5 61 45.9
Manes.04G059912 Manihot esculenta HOM05D000881 ORTHO05D000666 4.6e-07 58.5 61 44.3
Nitab4.5_0007747g0030 Nicotiana tabacum HOM05D000881 ORTHO05D000666 7.9e-07 57.8 58 48.3
PSO339G4238 Papaver somniferum HOM05D000881 ORTHO05D000666 1.0e-06 57.4 58 44.8
Rhsim03G0053400 Rhododendron simsii HOM05D000881 ORTHO05D000666 1.0e-06 57.4 57 45.6
GSVIVG01037509001 Vitis vinifera HOM05D000881 ORTHO05D000666 1.0e-06 57.4 58 44.8
TPR.G11722 Trifolium pratense HOM05D000881 ORTHO05D000666 1.3e-06 57.0 61 42.6
Dinv11927 Davidia involucrata HOM05D000881 ORTHO05D000666 1.8e-06 56.6 58 41.4
Sabra04G0129800 Salix brachista HOM05D000881 ORTHO05D000666 1.8e-06 56.6 58 39.7
Aqoxy1G00549 Aquilegia oxysepala HOM05D000881 ORTHO05D000666 2.3e-06 56.2 59 47.5
PSO384G3004 Papaver somniferum HOM05D000881 ORTHO05D000666 2.3e-06 56.2 58 44.8
Potri.009G153200 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.3e-06 56.2 61 36.1
Rhsim03G0053300 Rhododendron simsii HOM05D000881 ORTHO05D000666 2.3e-06 56.2 58 46.6
Manes.09G138800 Manihot esculenta HOM05D000881 ORTHO05D000666 3.0e-06 55.8 56 48.2
Sabra04G0129700 Salix brachista HOM05D000881 ORTHO05D000666 3.9e-06 55.5 58 39.7
Lsat_1_v5_gn_1_56241 Lactuca sativa HOM05D000881 ORTHO05D000666 5.1e-06 55.1 58 46.6
Medtr5g087450 Medicago truncatula HOM05D000881 ORTHO05D000666 5.1e-06 55.1 61 41.0
Nitab4.5_0018311g0010 Nicotiana tabacum HOM05D000881 ORTHO05D000666 5.1e-06 55.1 58 48.3
Oeu044647.1 Olea europaea HOM05D000881 ORTHO05D000666 5.1e-06 55.1 57 45.6
CDE05G3520 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 6.7e-06 54.7 58 41.4
Peaxi162Scf00217g00619 Petunia axillaris HOM05D000881 ORTHO05D000666 8.7e-06 54.3 56 46.4


User provided reference genes

Program Settings