Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 5.4e-122 441.0 229 100.0
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 3.3e-71 272.3 164 79.3
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 9.7e-71 270.8 226 63.7
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 1.3e-67 260.4 202 67.3
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.9e-67 259.2 204 61.8
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 2.9e-67 259.2 204 61.8
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 2.9e-67 259.2 221 62.0
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 7.2e-66 254.6 193 63.7
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 9.4e-66 254.2 222 58.6
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 2.7e-65 252.7 221 57.9
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 4.7e-65 251.9 219 59.4
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 1.4e-64 250.4 197 63.5
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 1.4e-64 250.4 222 57.2
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 1.8e-64 250.0 215 59.1
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 2.3e-64 249.6 168 69.0
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 3.0e-64 249.2 218 59.2
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 5.2e-64 248.4 174 64.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 6.8e-64 248.1 216 56.9
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 8.8e-64 247.7 216 56.9
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.5e-63 246.9 179 66.5
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 2.0e-63 246.5 181 63.5
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.0e-63 246.5 200 59.5
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 2.6e-63 246.1 217 57.6
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.6e-63 246.1 171 66.7
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.6e-63 246.1 185 63.2
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 4.4e-63 245.4 216 56.5
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.2e-62 243.0 166 65.1
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 4.8e-62 241.9 204 58.3
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 6.3e-62 241.5 163 66.3
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 6.3e-62 241.5 226 54.9
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 6.3e-62 241.5 170 65.3
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.1e-61 240.7 186 62.4
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.4e-61 240.4 227 54.6
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 1.4e-61 240.4 181 60.2
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.4e-61 240.4 228 57.0
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.8e-61 240.0 163 68.1
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.8e-61 240.0 170 65.9
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 4.1e-61 238.8 223 54.7
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 5.3e-61 238.4 207 56.5
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 5.3e-61 238.4 169 68.0
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 7.0e-61 238.0 217 55.3
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 7.0e-61 238.0 168 64.9
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 9.1e-61 237.7 204 57.8
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 2.0e-60 236.5 182 59.9
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 3.5e-60 235.7 223 54.3
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.5e-60 235.7 223 54.3
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 3.5e-60 235.7 224 53.6
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.0e-59 234.2 228 54.4
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 1.7e-59 233.4 202 57.4
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.9e-59 232.6 167 65.3
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 2.9e-59 232.6 170 62.4
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 3.8e-59 232.3 162 66.0
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 5.0e-59 231.9 175 63.4
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 5.0e-59 231.9 170 62.4
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 5.0e-59 231.9 199 56.8
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 8.5e-59 231.1 170 61.8
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.5e-58 230.3 168 64.9
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 2.5e-58 229.6 199 54.8
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 4.2e-58 228.8 201 55.7
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 7.2e-58 228.0 205 57.1
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 1.2e-57 227.3 227 53.3
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 2.7e-57 226.1 224 54.5
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 6.1e-57 224.9 180 60.0
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.0e-56 224.2 166 61.4
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.4e-56 223.8 176 60.2
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 2.3e-56 223.0 198 53.5
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 2.6e-55 219.5 197 53.8
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 4.8e-54 215.3 205 54.6
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.8e-53 213.4 164 58.5
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 3.1e-53 212.6 178 56.7
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 4.1e-53 212.2 164 58.5
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 9.1e-53 211.1 178 56.2
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 9.1e-53 211.1 178 56.2
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 9.1e-53 211.1 178 56.2
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 9.1e-53 211.1 178 56.2
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 2.0e-52 209.9 178 56.2
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.7e-52 209.5 164 57.3
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 5.9e-52 208.4 136 71.3
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 5.0e-51 205.3 174 54.6
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 2.5e-50 203.0 164 56.7
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.6e-49 200.3 164 55.5
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 2.1e-49 199.9 175 54.9
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 3.6e-49 199.1 175 54.3
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 2.0e-47 193.4 178 53.4
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 5.4e-45 185.3 329 36.8
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 5.9e-44 181.8 102 77.5
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 1.3e-43 180.6 129 65.1
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.5e-42 177.2 102 75.5
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.6e-41 173.7 181 48.6
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.7e-38 163.7 201 45.3
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 3.7e-38 162.5 105 69.5
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 1.1e-37 161.0 154 51.3
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 1.4e-37 160.6 117 63.2
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 4.3e-34 149.1 159 52.8
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 6.0e-28 128.6 75 80.0
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 1.9e-21 107.1 155 43.9
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 6.6e-19 98.6 121 43.8
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 4.3e-18 95.9 147 36.7
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 4.3e-18 95.9 126 41.3
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 3.6e-17 92.8 134 39.6
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 8.4e-14 81.6 146 37.7
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 5.4e-13 79.0 131 36.6
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 2.3e-11 73.6 40 80.0
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 6.2e-09 65.5 116 37.1


User provided reference genes

Program Settings