Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g08235_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D003404 1.4e-84 316.2 161 100.0
MBI11_g10522_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D003404 1.0e-58 230.3 134 89.6
MBI11_g08232_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D000022 1.8e-23 113.2 129 47.3
MBI11_g42116_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D003404 1.0e-21 107.5 164 41.5
MBI11_g08233_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D001207 1.8e-18 96.7 163 36.2
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 3.8e-13 79.0 131 35.9
Potri.006G134900 Populus trichocarpa HOM05D004113 ORTHO05D003404 3.2e-12 75.9 159 30.8
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 4.2e-12 75.5 132 35.6
MBI11_g08231_MAGBIO Magnolia biondii HOM05D020019 ORTHO05D001207 7.2e-12 74.7 90 48.9
QL03p019019 Quercus lobata HOM05D003556 ORTHO05D003404 3.6e-11 72.4 132 34.1
QL03p019667 Quercus lobata HOM05D003556 ORTHO05D003404 4.7e-11 72.0 132 34.1
QL03p019662 Quercus lobata HOM05D003556 ORTHO05D003404 6.1e-11 71.6 132 34.1
QL08p042930 Quercus lobata HOM05D003556 ORTHO05D003404 6.1e-11 71.6 132 34.1
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 8.0e-11 71.2 133 33.8
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.9e-10 68.9 141 31.2
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 5.2e-10 68.6 134 35.8
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 6.7e-10 68.2 132 34.8
PSO832G2602 Papaver somniferum HOM05D003556 ORTHO05D003404 1.1e-09 67.4 167 26.3
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 1.5e-09 67.0 147 32.0
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 1.5e-09 67.0 135 34.1
PSO081G0137 Papaver somniferum HOM05D001445 ORTHO05D001261 1.5e-09 67.0 144 34.0
HanXRQChr07g0188521 Helianthus annuus HOM05D001445 ORTHO05D001261 2.0e-09 66.6 132 33.3
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 2.6e-09 66.2 131 32.8
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 2.6e-09 66.2 134 32.8
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 2.6e-09 66.2 134 32.8
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 3.3e-09 65.9 139 32.4
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 3.3e-09 65.9 135 31.9
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 3.3e-09 65.9 153 33.3
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.7e-09 65.1 129 33.3
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 7.4e-09 64.7 132 32.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 7.4e-09 64.7 135 31.9
HanXRQChr16g0522931 Helianthus annuus HOM05D001445 ORTHO05D001261 1.3e-08 63.9 132 31.8
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.3e-08 63.9 135 32.6
PGSC0003DMG400044426 Solanum tuberosum HOM05D004113 ORTHO05D005233 1.3e-08 63.9 134 29.9
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 1.3e-08 63.9 132 34.1
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 1.7e-08 63.5 125 33.6
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 1.7e-08 63.5 135 31.1
Ciclev10013964m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.7e-08 63.5 132 34.1
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 2.2e-08 63.2 134 34.3
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.8e-08 62.8 136 33.8
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 2.8e-08 62.8 136 33.8
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 3.7e-08 62.4 162 31.5
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 3.7e-08 62.4 135 31.1
HPP92_004344 Vanilla planifolia HOM05D014663 ORTHO05D001261 3.7e-08 62.4 132 30.3
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 4.8e-08 62.0 134 32.8
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 6.3e-08 61.6 132 31.1
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 6.3e-08 61.6 132 31.8
PSO782G5274 Papaver somniferum HOM05D001445 ORTHO05D001261 8.2e-08 61.2 134 27.6
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 1.1e-07 60.8 131 31.3
PSO210G6958 Papaver somniferum HOM05D003556 ORTHO05D003404 1.1e-07 60.8 183 26.2
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 1.1e-07 60.8 143 33.6
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.1e-07 60.8 110 30.9
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.4e-07 60.5 141 31.9
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 1.4e-07 60.5 133 30.1
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.4e-07 60.5 134 32.8
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 1.4e-07 60.5 134 31.3
Lsat_1_v5_gn_7_11841 Lactuca sativa HOM05D001445 ORTHO05D001261 1.8e-07 60.1 135 32.6
PSO017G6871 Papaver somniferum HOM05D001445 ORTHO05D001261 1.8e-07 60.1 130 29.2
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 2.4e-07 59.7 135 32.6
QL03p019550 Quercus lobata HOM05D003556 ORTHO05D003404 2.4e-07 59.7 132 29.5
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.1e-07 59.3 153 32.7
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 3.1e-07 59.3 133 31.6
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 4.1e-07 58.9 76 39.5
PGSC0003DMG400037039 Solanum tuberosum HOM05D004113 ORTHO05D005233 4.1e-07 58.9 134 33.6
Haze_02903 Corylus avellana HOM05D001445 ORTHO05D001261 5.3e-07 58.5 133 32.3
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 5.3e-07 58.5 135 31.9
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 5.3e-07 58.5 139 30.9
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 7.0e-07 58.2 135 32.6
PSO170G5213 Papaver somniferum HOM05D001445 ORTHO05D001261 7.0e-07 58.2 130 27.7
PGR004G0072 Punica granatum HOM05D001445 ORTHO05D001261 7.0e-07 58.2 133 30.1
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 9.1e-07 57.8 134 30.6
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 9.1e-07 57.8 132 28.8
Nn1g02148 Nelumbo nucifera HOM05D001445 ORTHO05D001261 9.1e-07 57.8 132 30.3
Nitab4.5_0004809g0010 Nicotiana tabacum HOM05D001578 ORTHO05D001207 9.1e-07 57.8 132 27.3
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 9.1e-07 57.8 136 33.1
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 9.1e-07 57.8 132 31.1
Aqoxy7G04181 Aquilegia oxysepala HOM05D001445 ORTHO05D003404 1.2e-06 57.4 135 28.9
CiPaw.07G023600 Carya illinoinensis HOM05D003556 ORTHO05D003404 1.2e-06 57.4 127 29.1
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 1.2e-06 57.4 131 30.5
Zm00001eb229350 Zea mays HOM05D001445 ORTHO05D001261 1.2e-06 57.4 136 27.9
Duzib084G0732 Durio zibethinus HOM05D001445 ORTHO05D001261 1.6e-06 57.0 136 28.7
Eucgr.E00321 Eucalyptus grandis HOM05D001445 ORTHO05D001261 1.6e-06 57.0 133 31.6
HanXRQChr04g0115481 Helianthus annuus HOM05D001445 ORTHO05D001261 1.6e-06 57.0 135 29.6
Solyc01g088590.5 Solanum lycopersicum HOM05D001445 ORTHO05D001261 1.6e-06 57.0 133 32.3
Duzib138G0838 Durio zibethinus HOM05D003556 ORTHO05D003404 2.0e-06 56.6 138 29.7
FvH4_5g20950 Fragaria vesca HOM05D001445 ORTHO05D001261 2.0e-06 56.6 136 33.1
MD03G1290800 Malus domestica HOM05D003556 ORTHO05D003404 2.0e-06 56.6 134 29.9
Manes.03G045700 Manihot esculenta HOM05D004113 ORTHO05D005233 2.0e-06 56.6 144 27.8
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 2.0e-06 56.6 135 34.8
Prupe.3G007900 Prunus persica HOM05D001445 ORTHO05D001207 2.0e-06 56.6 132 31.1
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 2.0e-06 56.6 135 36.3
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.0e-06 56.6 135 32.6
Sopen01g035440 Solanum pennellii HOM05D001445 ORTHO05D001261 2.0e-06 56.6 133 32.3
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.0e-06 56.6 132 29.5
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.0e-06 56.6 132 29.5
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.0e-06 56.6 173 27.2
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 2.6e-06 56.2 141 29.1
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.6e-06 56.2 131 32.1
CiPaw.11G087100 Carya illinoinensis HOM05D001445 ORTHO05D001261 3.5e-06 55.8 135 31.1
COL.COLO4_17128 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.5e-06 55.8 137 30.7
Gohir.A07G126650 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.5e-06 55.8 133 27.1
Gohir.D07G130800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.5e-06 55.8 133 27.8
Sc08g0009050 Simmondsia chinensis HOM05D001445 ORTHO05D001261 3.5e-06 55.8 134 31.3
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 4.5e-06 55.5 132 28.0
PSO081G0057 Papaver somniferum HOM05D001445 ORTHO05D001261 4.5e-06 55.5 130 27.7
Sc07g0008930 Simmondsia chinensis HOM05D001445 ORTHO05D001261 4.5e-06 55.5 128 29.7
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 5.9e-06 55.1 135 29.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 5.9e-06 55.1 133 30.8
Potri.003G086500 Populus trichocarpa HOM05D001445 ORTHO05D001261 5.9e-06 55.1 152 28.9
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 5.9e-06 55.1 133 33.1
vmacro21085 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 5.9e-06 55.1 136 30.9
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 7.7e-06 54.7 134 31.3
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 7.7e-06 54.7 134 31.3
Glyma.03G103400 Glycine max HOM05D001445 ORTHO05D001261 7.7e-06 54.7 135 31.1


User provided reference genes

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