Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g08091_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 9.5e-56 219.9 110 100.0
MBI03_g06007_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.2e-21 106.7 97 54.6
MBI07_g15835_MAGBIO Magnolia biondii HOM05D008422 ORTHO05D008058 2.4e-19 99.0 79 65.8
MBI01_g19129_MAGBIO Magnolia biondii HOM05D008422 ORTHO05D008058 3.2e-19 98.6 64 73.4
MBI18_g44345_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 5.4e-19 97.8 94 55.3
MBI08_g21304_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 2.1e-18 95.9 63 69.8
MBI15_g10643_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 4.6e-18 94.7 69 62.3
MBI17_g19936_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.3e-17 93.2 72 63.9
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.3e-17 92.4 106 48.1
MBI16_g26599_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 6.6e-17 90.9 89 55.1
MBI10_g17799_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.5e-16 89.0 89 50.6
MBI12_g41794_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 2.5e-16 89.0 87 54.0
MBI19_g36251_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 9.6e-16 87.0 68 66.2
MBI03_g00030_MAGBIO Magnolia biondii HOM05D034325 ORTHO05D008058 1.2e-15 86.7 58 72.4
MBI05_g19268_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 5.2e-14 81.3 89 48.3
MBI18_g15799_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 9.0e-14 80.5 59 64.4
MBI15_g35412_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 1.2e-13 80.1 89 48.3
MBI18_g01858_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 1.2e-13 80.1 79 53.2
MBI17_g24516_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 4.4e-13 78.2 62 59.7
MBI02_g43657_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 7.6e-13 77.4 59 62.7
MBI05_g37662_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 2.9e-12 75.5 58 63.8
MBI19_g46556_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 3.8e-12 75.1 87 46.0
MBI05_g12850_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 6.4e-12 74.3 56 66.1
MBI02_g15274_MAGBIO Magnolia biondii HOM05D001748 ORTHO05D001759 8.4e-12 73.9 57 61.4
MBI18_g24922_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 8.4e-12 73.9 62 61.3
MBI19_g04414_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 1.4e-11 73.2 60 60.0
MBI05_g19537_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 1.9e-11 72.8 47 70.2
MBI11_g41301_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.2e-11 72.0 46 69.6
MBI11_g42446_MAGBIO Magnolia biondii HOM05D008422 ORTHO05D008058 4.2e-11 71.6 75 50.7
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.3e-11 70.5 94 38.3
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.3e-11 70.5 92 38.0
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.2e-10 70.1 88 39.8
MBI17_g43986_MAGBIO Magnolia biondii HOM05D034325 ORTHO05D000352 1.6e-10 69.7 53 66.0
MBI17_g26639_MAGBIO Magnolia biondii HOM05D034325 ORTHO05D008058 2.1e-10 69.3 60 56.7
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-09 67.0 72 40.3
MBI19_g41828_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 1.3e-09 66.6 50 60.0
AUR62022263 Chenopodium quinoa HOM05D008320 ORTHO05D000352 5.1e-09 64.7 66 48.5
MBI15_g45222_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 5.1e-09 64.7 105 42.9
AUR62021090 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.6e-09 64.3 66 48.5
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.7e-09 63.9 92 35.9
MBI06_g23281_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 8.7e-09 63.9 74 47.3
AUR62013405 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.1e-08 63.5 57 52.6
AUR62023870 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.1e-08 63.5 56 53.6
MBI19_g15939_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 1.5e-08 63.2 57 52.6
Oeu039992.1 Olea europaea HOM05D000429 ORTHO05D000352 1.5e-08 63.2 54 55.6
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.5e-08 63.2 85 43.5
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.5e-08 63.2 85 43.5
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.5e-08 63.2 89 41.6
BcaC06g35018 Brassica carinata HOM05D008499 ORTHO05D000352 2.5e-08 62.4 58 41.4
AUR62013082 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.5e-08 62.4 56 53.6
AUR62021967 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.5e-08 62.4 56 53.6
AUR62044001 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.5e-08 62.4 57 52.6
AUR62041273 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.3e-08 61.6 56 51.8
MBI12_g31047_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.3e-08 61.6 40 72.5
Oeu018836.1 Olea europaea HOM05D000429 ORTHO05D000352 4.3e-08 61.6 54 53.7
Oeu050480.1 Olea europaea HOM05D000429 ORTHO05D000352 4.3e-08 61.6 54 53.7
CSS0002712 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.6e-08 61.2 87 35.6
AUR62035460 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.6e-08 61.2 56 53.6
BcaB07g33706 Brassica carinata HOM05D008499 ORTHO05D000352 7.3e-08 60.8 57 43.9
AUR62014321 Chenopodium quinoa HOM05D000429 ORTHO05D000352 7.3e-08 60.8 56 51.8
Oeu024566.2 Olea europaea HOM05D000047 ORTHO05D000044 9.6e-08 60.5 54 50.0
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 9.6e-08 60.5 89 40.4
CANSAT80G1053 Cannabis sativa HOM05D000429 ORTHO05D000352 1.3e-07 60.1 89 36.0
CANSAT80G2076 Cannabis sativa HOM05D000429 ORTHO05D000352 1.3e-07 60.1 91 33.0
AUR62034884 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.3e-07 60.1 56 51.8
Oeu033154.2 Olea europaea HOM05D000047 ORTHO05D000352 1.3e-07 60.1 54 51.9
AUR62024397 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.6e-07 59.7 66 45.5
MBI18_g41472_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 1.6e-07 59.7 68 47.1
BcaC08g43699 Brassica carinata HOM05D008499 ORTHO05D000352 2.1e-07 59.3 58 39.7
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-07 59.3 69 36.2
AUR62002668 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.1e-07 59.3 56 51.8
AUR62040874 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.1e-07 59.3 56 50.0
Oeu014576.1 Olea europaea HOM05D005901 ORTHO05D000880 2.1e-07 59.3 52 51.9
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 2.8e-07 58.9 72 36.1
FvH4_4g05724 Fragaria vesca HOM05D000429 ORTHO05D000352 2.8e-07 58.9 95 34.7
BcaC04g21664 Brassica carinata HOM05D000429 ORTHO05D000352 3.6e-07 58.5 54 42.6
A06p24370 Brassica napus HOM05D008467 ORTHO05D000352 3.6e-07 58.5 68 41.2
MBI19_g43236_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 3.6e-07 58.5 61 52.5
Sed0025965 Sechium edule HOM05D000429 ORTHO05D008058 3.6e-07 58.5 50 58.0
BcaC07g37506 Brassica carinata HOM05D021877 ORTHO05D024062 4.8e-07 58.2 88 35.2
BcaC07g38208 Brassica carinata HOM05D000429 ORTHO05D000352 4.8e-07 58.2 58 37.9
CANSAT35G1271 Cannabis sativa HOM05D000429 ORTHO05D000352 4.8e-07 58.2 85 36.5
AUR62024547 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.8e-07 58.2 57 49.1
MBI03_g44224_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.8e-07 58.2 33 72.7
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.2e-07 57.8 66 39.4
CANSAT01G3212 Cannabis sativa HOM05D008422 ORTHO05D000352 6.2e-07 57.8 88 38.6
AUR62042050 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.2e-07 57.8 56 50.0
TWI77G0887 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.2e-07 57.8 90 37.8
CSS0036740 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 8.1e-07 57.4 66 39.4
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 8.1e-07 57.4 85 40.0
CANSAT11G2011 Cannabis sativa HOM05D000429 ORTHO05D000352 8.1e-07 57.4 69 34.8
CANSAT25G1487 Cannabis sativa HOM05D000429 ORTHO05D000352 8.1e-07 57.4 69 37.7
AUR62024363 Chenopodium quinoa HOM05D000429 ORTHO05D000352 8.1e-07 57.4 56 48.2
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 72 33.3
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 69 34.8
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 89 33.7
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 75 33.3
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.4e-06 56.6 54 44.4
CANSAT35G1128 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-06 56.6 88 37.5
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-06 56.6 69 40.6
TWI31G0570 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-06 56.6 57 40.4
BolC2t10001H Brassica oleracea HOM05D000429 ORTHO05D000880 1.8e-06 56.2 64 40.6
CSS0043325 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.8e-06 56.2 54 44.4
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-06 56.2 86 34.9
CANSAT80G0215 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-06 56.2 87 37.9
CANSAT80G0281 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-06 56.2 88 37.5
AUR62042093 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.8e-06 56.2 66 42.4
AUR62042094 Chenopodium quinoa HOM05D000429 ORTHO05D000352 1.8e-06 56.2 66 42.4
vmacro05344 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.8e-06 56.2 87 34.5
vmacro08897 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.8e-06 56.2 82 36.6
BcaB07g33035 Brassica carinata HOM05D008499 ORTHO05D000352 2.4e-06 55.8 100 37.0
CSS0004875 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.4e-06 55.8 54 46.3
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.4e-06 55.8 54 44.4
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 2.4e-06 55.8 66 37.9
AUR62042318 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.4e-06 55.8 56 46.4
TWI77G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.4e-06 55.8 90 36.7
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 3.1e-06 55.5 54 46.3
AUR62032694 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.1e-06 55.5 57 49.1
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 3.1e-06 55.5 55 49.1
vmacro12925 Vaccinium macrocarpon HOM05D000382 ORTHO05D000352 3.1e-06 55.5 82 35.4
BraA08t32791Z Brassica rapa HOM05D000429 ORTHO05D000352 4.0e-06 55.1 64 40.6
CSS0006586 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.0e-06 55.1 66 37.9
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 4.0e-06 55.1 87 36.8
CANSAT71G0013 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-06 55.1 87 32.2
TWI18G0663 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.0e-06 55.1 57 38.6
TWI18G1081 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.0e-06 55.1 74 40.5
vmacro12133 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 4.0e-06 55.1 87 34.5
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 5.3e-06 54.7 54 44.4
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 5.3e-06 54.7 88 38.6
CANSAT25G2129 Cannabis sativa HOM05D000429 ORTHO05D000352 5.3e-06 54.7 69 40.6
CANSAT80G1350 Cannabis sativa HOM05D000429 ORTHO05D000352 5.3e-06 54.7 69 37.7
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 5.3e-06 54.7 50 50.0
MBI12_g14768_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000352 5.3e-06 54.7 45 51.1
vmacro19814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 5.3e-06 54.7 87 34.5
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 5.3e-06 54.7 77 39.0
CSS0039024 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.9e-06 54.3 91 29.7
CANSAT01G1463 Cannabis sativa HOM05D000429 ORTHO05D000352 6.9e-06 54.3 69 33.3
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 6.9e-06 54.3 65 38.5
CANSAT80G1023 Cannabis sativa HOM05D008422 ORTHO05D000352 6.9e-06 54.3 88 37.5
AUR62027250 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.9e-06 54.3 56 44.6
MBI18_g44420_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D008058 6.9e-06 54.3 47 57.4
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 6.9e-06 54.3 54 50.0
TWI38G1677 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.9e-06 54.3 54 42.6
vmacro12970 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 6.9e-06 54.3 87 33.3
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 9.0e-06 53.9 54 42.6
CANSAT25G0334 Cannabis sativa HOM05D008422 ORTHO05D000352 9.0e-06 53.9 55 47.3
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 9.0e-06 53.9 69 33.3
CANSAT78G0258 Cannabis sativa HOM05D000429 ORTHO05D000352 9.0e-06 53.9 87 36.8
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 9.0e-06 53.9 54 46.3
vmacro22814 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 9.0e-06 53.9 82 35.4


User provided reference genes

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