Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 3.6e-157 558.1 272 100.0
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.5e-57 227.3 186 71.5
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 3.3e-57 226.1 195 69.2
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 9.5e-57 224.6 197 66.0
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 1.6e-56 223.8 195 65.1
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 2.8e-56 223.0 194 67.0
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 4.7e-56 222.2 201 65.2
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 4.7e-56 222.2 191 68.6
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 6.2e-56 221.9 192 69.3
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 6.2e-56 221.9 192 69.3
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.4e-55 220.7 190 69.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 6.8e-55 218.4 197 67.0
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 1.2e-54 217.6 200 66.5
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.5e-54 217.2 193 69.4
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 3.4e-54 216.1 186 66.7
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.7e-53 213.8 196 69.4
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 3.7e-53 212.6 191 64.9
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 4.9e-53 212.2 199 64.8
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 6.4e-53 211.8 195 67.2
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.9e-52 210.3 187 64.7
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 7.0e-52 208.4 189 65.6
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 9.2e-52 208.0 187 64.2
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 9.2e-52 208.0 186 63.4
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 9.2e-52 208.0 191 66.0
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.2e-51 207.6 196 64.8
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 1.6e-51 207.2 191 64.9
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.6e-51 207.2 186 62.9
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.6e-51 207.2 187 66.8
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 2.7e-51 206.5 156 73.7
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 4.6e-51 205.7 191 66.0
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 6.0e-51 205.3 192 65.1
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 7.8e-51 204.9 184 65.2
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 1.0e-50 204.5 188 64.4
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.3e-50 204.1 192 64.6
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 1.3e-50 204.1 252 50.8
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 2.3e-50 203.4 186 62.9
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 2.3e-50 203.4 188 61.7
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 3.0e-50 203.0 144 76.4
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 3.9e-50 202.6 187 63.6
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 3.9e-50 202.6 207 62.3
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 5.0e-50 202.2 188 63.3
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 5.0e-50 202.2 188 63.3
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 5.0e-50 202.2 188 62.8
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 6.6e-50 201.8 188 61.7
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 8.6e-50 201.4 189 59.8
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 8.6e-50 201.4 192 64.6
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 8.6e-50 201.4 186 62.4
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.9e-49 200.3 186 64.0
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 1.9e-49 200.3 191 60.2
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.5e-49 199.9 196 64.8
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 2.5e-49 199.9 171 64.3
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.3e-49 199.5 186 64.0
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 4.3e-49 199.1 185 62.2
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 7.3e-49 198.4 194 62.9
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 7.3e-49 198.4 196 59.2
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 9.5e-49 198.0 196 64.3
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 9.5e-49 198.0 186 65.1
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 1.2e-48 197.6 186 64.5
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.2e-48 197.6 186 64.5
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.2e-48 197.6 127 81.1
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 2.1e-48 196.8 244 55.7
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.6e-48 196.1 185 63.8
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 6.2e-48 195.3 118 84.7
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 6.2e-48 195.3 188 62.2
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 1.1e-47 194.5 195 59.5
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.4e-47 194.1 116 85.3
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.8e-47 193.7 201 61.2
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.8e-47 193.7 118 83.9
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.8e-47 193.7 192 59.9
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 2.3e-47 193.4 187 60.4
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 4.0e-47 192.6 210 53.8
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 5.2e-47 192.2 111 88.3
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 5.2e-47 192.2 192 59.9
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 8.9e-47 191.4 166 65.7
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 3.4e-46 189.5 196 58.2
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.4e-46 189.5 121 82.6
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.4e-46 189.5 192 58.3
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 5.8e-46 188.7 194 59.3
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 7.5e-46 188.3 123 79.7
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 7.5e-46 188.3 123 79.7
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 2.2e-45 186.8 199 57.8
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 3.7e-45 186.0 105 87.6
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 3.2e-44 183.0 170 65.9
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 3.2e-44 183.0 206 55.8
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 9.2e-44 181.4 174 64.4
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 4.6e-43 179.1 179 57.5
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 6.0e-43 178.7 184 58.7
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 7.8e-43 178.3 189 55.6
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.7e-42 177.2 218 51.8
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.0e-42 176.4 170 61.2
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 3.9e-42 176.0 195 53.8
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 5.1e-42 175.6 145 63.4
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 8.6e-42 174.9 186 54.8
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.1e-41 174.5 192 54.7
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 1.5e-41 174.1 192 54.7
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.5e-41 174.1 104 82.7
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.5e-41 174.1 189 55.0
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 3.3e-41 172.9 120 75.8
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 5.6e-41 172.2 169 61.5
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 5.6e-41 172.2 149 62.4
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 9.5e-41 171.4 125 72.0
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 9.5e-41 171.4 167 61.1
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 9.5e-41 171.4 167 61.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.6e-40 170.6 198 51.5
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 2.1e-40 170.2 198 52.0
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.8e-40 169.9 114 73.7
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 3.6e-40 169.5 198 53.0
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 3.6e-40 169.5 198 53.0
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 4.7e-40 169.1 113 74.3
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 4.7e-40 169.1 199 52.8
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.7e-40 169.1 194 55.2
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 6.2e-40 168.7 188 53.7
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 6.2e-40 168.7 174 60.9
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.2e-40 168.7 154 58.4
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 8.1e-40 168.3 195 52.8
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 8.1e-40 168.3 195 52.8
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 8.1e-40 168.3 199 52.3
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.4e-39 167.5 200 52.5
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.8e-39 167.2 195 52.8
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 2.3e-39 166.8 202 51.0
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 5.2e-39 165.6 186 57.0
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 5.2e-39 165.6 196 51.0
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 6.8e-39 165.2 186 53.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.3e-37 161.0 141 68.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 3.8e-37 159.5 94 84.0
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 8.4e-37 158.3 118 70.3
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.2e-36 156.4 196 48.0
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 5.4e-36 155.6 200 51.5
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 1.6e-35 154.1 200 52.5
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 2.1e-35 153.7 118 63.6
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.1e-35 153.7 93 82.8
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 2.7e-35 153.3 114 71.9
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.9e-34 149.4 165 58.2
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 2.4e-31 140.2 110 64.5
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.0e-30 137.1 109 64.2
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.8e-29 132.9 112 61.6
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 4.9e-29 132.5 106 63.2
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.4e-28 131.0 125 56.8
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 5.4e-28 129.0 92 68.5
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 7.1e-28 128.6 126 57.1
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 4.6e-27 125.9 121 53.7
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.1e-24 117.1 188 45.2
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.4e-23 114.4 77 75.3
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 4.9e-21 105.9 119 49.6
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 6.0e-19 99.0 92 65.2
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 5.3e-15 85.9 104 42.3
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 3.5e-11 73.2 51 68.6
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.5e-11 73.2 156 35.9
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 4.6e-11 72.8 87 40.2
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 7.4e-09 65.5 62 54.8
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.8e-07 60.8 35 88.6
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 1.2e-06 58.2 39 66.7
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 2.6e-06 57.0 36 80.6


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