Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.7e-224 782.3 396 100.0
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.4e-202 709.5 432 86.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 1.1e-141 507.3 397 66.0
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.4e-141 506.1 394 65.2
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 9.0e-141 504.2 411 62.0
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 4.5e-140 501.9 394 66.5
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.4e-138 496.9 393 64.6
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 7.2e-138 494.6 385 66.2
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.6e-137 493.4 394 63.2
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 6.1e-137 491.5 396 63.4
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.1e-137 491.5 395 63.3
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.0e-136 490.7 396 64.1
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 2.3e-136 489.6 397 64.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.0e-136 489.2 396 63.9
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.1e-135 487.3 396 63.1
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 4.8e-134 481.9 393 63.4
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 6.3e-134 481.5 393 62.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 8.2e-134 481.1 395 62.3
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.1e-133 479.2 394 62.7
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.1e-133 479.2 397 61.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 6.9e-133 478.0 401 61.6
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 9.1e-133 477.6 401 61.1
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.5e-132 476.9 393 61.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.0e-132 476.5 393 62.1
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.0e-131 474.2 395 60.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.3e-131 473.8 393 61.6
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.9e-131 472.6 395 63.0
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.9e-130 469.9 396 60.6
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 2.5e-130 469.5 396 61.9
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 5.5e-130 468.4 393 61.3
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.6e-129 466.8 397 60.5
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.1e-129 466.5 393 61.1
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.7e-129 466.1 393 61.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 4.7e-129 465.3 394 61.4
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 4.7e-129 465.3 397 60.5
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 6.1e-129 464.9 393 61.3
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.4e-128 463.8 394 59.9
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.8e-128 463.4 393 60.6
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 3.0e-128 462.6 394 60.7
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.7e-128 461.5 392 61.2
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 6.7e-128 461.5 397 59.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.1e-127 460.7 395 61.0
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.5e-127 460.3 396 60.9
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 2.0e-127 459.9 394 60.4
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.0e-127 459.9 395 60.8
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.6e-127 459.5 393 59.8
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 7.4e-127 458.0 397 60.2
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 7.4e-127 458.0 397 60.2
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 7.4e-127 458.0 397 60.2
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 9.7e-127 457.6 397 60.7
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-126 457.2 394 60.2
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.2e-126 456.4 394 59.9
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.7e-126 455.7 395 60.5
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 8.2e-126 454.5 395 59.0
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.5e-124 450.3 395 58.7
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 7.7e-124 448.0 395 58.7
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.7e-123 446.8 393 59.3
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 2.9e-123 446.0 395 59.7
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 4.2e-122 442.2 397 57.9
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.5e-122 441.8 397 59.2
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 7.2e-122 441.4 395 56.7
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 9.4e-122 441.0 394 57.6
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.2e-121 440.7 391 57.8
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.6e-121 440.3 397 59.4
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 6.1e-121 438.3 394 56.6
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.0e-120 437.6 393 58.3
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.6e-119 433.0 387 58.1
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 4.4e-119 432.2 359 62.7
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.4e-117 426.4 395 57.2
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 3.1e-117 426.0 357 61.3
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 3.1e-117 426.0 395 57.0
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 7.0e-117 424.9 359 61.3
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 4.5e-116 422.2 357 60.2
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.7e-115 420.2 394 54.8
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.4e-112 410.6 357 59.7
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.7e-112 408.3 367 58.9
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.6e-111 406.4 395 55.4
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.5e-106 389.8 299 65.9
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.5e-106 389.8 395 54.9
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 4.8e-102 375.6 395 50.6
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 6.8e-88 328.6 263 62.4
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.0e-87 327.0 371 45.6
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 2.6e-87 326.6 384 47.7
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.7e-86 323.9 373 46.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.2e-86 323.6 385 45.5
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 3.2e-85 319.7 268 62.7
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.5e-84 316.2 387 47.5
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 6.2e-81 305.4 376 43.9
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 2.3e-67 260.4 345 45.5
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 9.9e-63 245.0 249 55.4
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.5e-58 231.1 505 32.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 4.3e-58 229.6 193 59.6
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.0e-56 223.0 179 60.9
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.9e-43 179.9 165 58.8
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.4e-39 166.8 156 55.8
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.4e-39 166.8 156 55.8
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.7e-25 120.2 188 41.0
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.9e-24 115.9 303 30.4
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.7e-17 93.6 88 48.9
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.4e-16 91.7 87 48.3
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 3.1e-16 90.5 77 61.0
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.8e-14 83.6 86 38.4
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 3.0e-11 73.9 54 68.5
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 3.3e-10 70.5 65 52.3


User provided reference genes

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