Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI11_g00101_MAGBIO Magnolia biondii HOM05D000727 ORTHO05D048524 6.9e-12 73.6 37 100.0
MBI15_g20137_MAGBIO Magnolia biondii HOM05D001162 ORTHO05D011024 1.1e-09 66.2 37 89.2
Nn2g13692 Nelumbo nucifera HOM05D000727 ORTHO05D000541 9.3e-09 63.2 37 83.8
Dinv23097 Davidia involucrata HOM05D000727 ORTHO05D000541 2.1e-08 62.0 37 78.4
CSS0008683 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 6.0e-08 60.5 37 81.1
CSS0045349 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 6.0e-08 60.5 37 81.1
TAR369G0911 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.0e-07 59.7 37 75.7
GSVIVG01033966001 Vitis vinifera HOM05D000727 ORTHO05D000541 1.0e-07 59.7 37 75.7
TAR633G2673 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.3e-07 59.3 37 78.4
MSTRG.5580 Avicennia marina HOM05D000727 ORTHO05D000541 1.8e-07 58.9 37 75.7
TAR623G0383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.8e-07 58.9 37 73.0
TAR636G2383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.8e-07 58.9 37 78.4
MSTRG.19015 Avicennia marina HOM05D000727 ORTHO05D000541 3.9e-07 57.8 37 75.7
CDE03G0021 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 3.9e-07 57.8 37 75.7
Nn2g11467 Nelumbo nucifera HOM05D000727 ORTHO05D000541 3.9e-07 57.8 37 78.4
ATR0618G150 Amborella trichopoda HOM05D000727 ORTHO05D000541 5.1e-07 57.4 33 84.8
Prupe.6G276300 Prunus persica HOM05D000727 ORTHO05D000541 5.1e-07 57.4 37 75.7
Actinidia05368 Actinidia chinensis HOM05D000727 ORTHO05D000541 6.7e-07 57.0 37 78.4
Eucgr.A00506 Eucalyptus grandis HOM05D000727 ORTHO05D000541 6.7e-07 57.0 37 75.7
Actinidia29106 Actinidia chinensis HOM05D000727 ORTHO05D000541 8.7e-07 56.6 37 73.0
SalBow5G0590 Salvia bowleyana HOM05D000727 ORTHO05D000541 8.7e-07 56.6 37 73.0
HPP92_015306 Vanilla planifolia HOM05D000727 ORTHO05D000541 8.7e-07 56.6 37 75.7
CSS0039608 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 1.1e-06 56.2 36 77.8
HanXRQChr13g0406191 Helianthus annuus HOM05D000727 ORTHO05D000541 1.1e-06 56.2 37 75.7
SGA_v2.0_scaffold75G25017 Striga asiatica HOM05D000727 ORTHO05D000541 1.1e-06 56.2 37 73.0
Duzib114G0948 Durio zibethinus HOM05D000727 ORTHO05D000541 1.5e-06 55.8 33 81.8
CiPaw.10G156100 Carya illinoinensis HOM05D000727 ORTHO05D000541 1.9e-06 55.5 37 70.3
Cc06_g01450 Coffea canephora HOM05D000727 ORTHO05D000541 1.9e-06 55.5 37 70.3
PGR004G1812 Punica granatum HOM05D000727 ORTHO05D000541 1.9e-06 55.5 36 75.0
CDE04G3528 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 3.3e-06 54.7 37 73.0
Actinidia11595 Actinidia chinensis HOM05D000727 ORTHO05D000541 4.3e-06 54.3 34 76.5
GSVIVG01032839001 Vitis vinifera HOM05D000727 ORTHO05D048524 4.3e-06 54.3 33 75.8
Ciclev10032930m.g Citrus clementina HOM05D000727 ORTHO05D000541 5.6e-06 53.9 36 72.2
Lj1g0014439 Lotus japonicus HOM05D000727 ORTHO05D000541 5.6e-06 53.9 37 70.3
VMungo0331G1659 Vigna mungo HOM05D000727 ORTHO05D000541 5.6e-06 53.9 37 70.3
Rhsim05G0214100 Rhododendron simsii HOM05D000727 ORTHO05D000541 7.4e-06 53.5 37 70.3
SGA_v2.0_scaffold85G26745 Striga asiatica HOM05D000727 ORTHO05D000541 9.6e-06 53.1 34 73.5


User provided reference genes

Program Settings