Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.7e-109 399.4 213 100.0
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 2.2e-101 372.5 211 93.4
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 6.1e-75 284.6 203 75.9
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 1.0e-74 283.9 203 74.9
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.9e-73 279.6 201 77.6
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 2.8e-72 275.8 203 74.9
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 2.8e-72 275.8 203 74.9
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 4.8e-72 275.0 203 74.4
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 4.8e-72 275.0 208 72.6
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 4.1e-71 271.9 203 71.4
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 5.3e-71 271.6 217 71.9
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 6.9e-71 271.2 206 71.8
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 3.4e-70 268.9 199 74.9
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 1.3e-69 266.9 202 72.3
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 2.2e-69 266.2 205 71.7
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 3.2e-68 262.3 202 72.3
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 3.2e-68 262.3 206 69.9
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 7.2e-68 261.2 202 70.8
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 7.2e-68 261.2 202 71.3
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 3.6e-67 258.8 207 70.0
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 4.6e-67 258.5 202 71.8
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 7.9e-67 257.7 203 70.9
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 2.3e-66 256.1 207 66.7
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 3.0e-66 255.8 203 70.4
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 3.9e-66 255.4 208 68.8
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 6.7e-66 254.6 202 70.8
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 2.0e-65 253.1 205 67.8
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 3.3e-65 252.3 204 67.6
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 7.4e-65 251.1 202 69.3
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 7.4e-65 251.1 208 67.3
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 7.4e-65 251.1 208 68.3
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 1.7e-64 250.0 202 68.8
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 1.7e-64 250.0 206 68.0
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 4.8e-64 248.4 208 70.7
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 6.3e-64 248.1 202 69.8
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 6.3e-64 248.1 201 69.2
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 1.4e-63 246.9 204 66.7
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 3.1e-63 245.7 193 71.0
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 3.1e-63 245.7 208 67.8
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 6.9e-63 244.6 210 67.1
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 1.5e-62 243.4 204 68.6
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 2.0e-62 243.0 183 74.3
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 2.6e-62 242.7 192 71.4
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 4.5e-62 241.9 184 72.3
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 5.9e-62 241.5 204 67.2
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 1.0e-61 240.7 202 68.3
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.2e-61 239.6 204 68.1
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 2.9e-61 239.2 223 63.7
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 6.5e-61 238.0 249 57.8
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 6.5e-61 238.0 201 67.2
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 6.5e-61 238.0 201 67.2
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 8.5e-61 237.7 203 66.5
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 8.5e-61 237.7 203 66.0
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 1.1e-60 237.3 207 65.7
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 1.4e-60 236.9 208 64.4
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 3.2e-60 235.7 207 66.7
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 2.1e-59 233.0 203 67.0
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 2.1e-59 233.0 202 65.8
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 3.6e-59 232.3 194 67.0
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 4.7e-59 231.9 198 67.2
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 7.9e-59 231.1 201 69.2
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 7.9e-59 231.1 201 64.7
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 1.0e-58 230.7 211 64.5
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 1.4e-58 230.3 201 65.7
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 1.8e-58 229.9 204 64.7
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 2.3e-58 229.6 196 66.8
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 3.0e-58 229.2 208 66.8
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 3.9e-58 228.8 197 66.5
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 5.1e-58 228.4 203 66.0
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 6.7e-58 228.0 203 65.5
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 8.8e-58 227.6 183 71.6
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 8.8e-58 227.6 203 65.5
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.0e-57 226.5 203 65.0
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.6e-57 226.1 203 65.5
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 2.6e-57 226.1 196 66.8
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 3.3e-57 225.7 204 62.3
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 3.3e-57 225.7 183 69.9
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 1.3e-56 223.8 204 65.7
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 1.7e-56 223.4 213 60.1
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 4.8e-56 221.9 183 68.3
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 6.3e-56 221.5 200 62.5
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 1.8e-55 219.9 200 63.0
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 2.4e-55 219.5 202 61.4
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 1.2e-54 217.2 199 64.8
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.2e-54 217.2 183 67.2
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 1.2e-54 217.2 201 61.7
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 2.0e-54 216.5 203 64.5
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 4.5e-54 215.3 195 62.1
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 5.9e-54 214.9 211 61.6
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 1.3e-53 213.8 203 60.1
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 3.8e-53 212.2 198 61.6
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 6.5e-53 211.5 204 60.8
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 6.5e-53 211.5 203 61.1
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 6.5e-53 211.5 203 63.5
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 8.5e-53 211.1 199 61.8
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 1.1e-52 210.7 202 60.4
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 2.5e-52 209.5 202 59.9
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 9.4e-52 207.6 202 59.4
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 1.2e-51 207.2 202 61.4
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 2.1e-51 206.5 219 58.4
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.6e-51 205.7 204 59.8
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 6.1e-51 204.9 214 58.9
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 1.8e-50 203.4 203 63.5
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 4.0e-50 202.2 201 58.7
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 1.1e-49 200.7 202 59.9
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 1.7e-48 196.8 207 58.0
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 2.8e-48 196.1 208 61.5
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 3.7e-48 195.7 184 60.9
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 3.7e-48 195.7 214 58.4
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 1.1e-47 194.1 204 57.8
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 4.1e-47 192.2 204 59.3
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 7.0e-47 191.4 206 56.3
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 1.6e-46 190.3 208 57.2
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 1.6e-46 190.3 208 56.2
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 1.1e-44 184.1 184 59.2
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 1.1e-44 184.1 203 57.6
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 1.5e-44 183.7 208 58.2
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 8.0e-43 177.9 186 59.7
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 1.4e-42 177.2 198 55.6
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 6.8e-42 174.9 204 53.9
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 2.6e-41 172.9 207 52.7
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 1.3e-40 170.6 201 54.2
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 3.7e-40 169.1 206 55.3
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 1.6e-38 163.7 207 51.7
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 1.7e-37 160.2 215 50.2
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 4.2e-36 155.6 243 49.8
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.6e-35 153.7 179 56.4
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 2.3e-34 149.8 208 52.4
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.6e-30 137.1 86 83.7
arahy.Tifrunner.gnm1.ann1.I95HTR Arachis hypogaea HOM05D004430 ORTHO05D005088 5.0e-29 132.1 203 46.8
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.1e-27 126.7 204 43.1
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 4.4e-25 119.0 241 41.1
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 7.5e-25 118.2 242 39.7
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 1.8e-23 113.6 246 40.7
TAR622G0490 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.6e-22 110.5 86 68.6
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 4.6e-22 109.0 246 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 1.2e-19 100.9 255 40.0
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 2.0e-14 83.6 259 33.2
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 2.5e-12 76.6 206 33.5
Actinidia19338 Actinidia chinensis HOM05D004430 ORTHO05D005088 7.5e-09 65.1 68 55.9
SHI23780 Sapria himalayana HOM05D004430 ORTHO05D005088 8.3e-08 61.6 107 49.5


User provided reference genes

Program Settings