Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 5.5e-125 451.1 239 100.0
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.1e-32 144.4 82 95.1
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.7e-28 129.4 181 49.7
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.0e-22 111.3 129 55.0
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.3e-22 110.9 187 47.6
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.5e-21 107.5 121 54.5
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 1.5e-21 107.5 145 49.0
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 2.5e-21 106.7 177 45.8
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 3.3e-21 106.3 175 44.6
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 4.3e-21 105.9 133 52.6
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 5.6e-21 105.5 133 52.6
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.3e-20 104.4 117 55.6
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 4.8e-20 102.4 174 47.7
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 8.2e-20 101.7 162 45.7
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.1e-19 101.3 118 53.4
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.4e-19 100.9 100 60.0
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.8e-19 100.5 136 49.3
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.8e-19 100.5 159 46.5
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 2.4e-19 100.1 181 42.0
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 3.1e-19 99.8 168 46.4
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 4.0e-19 99.4 173 45.1
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 4.0e-19 99.4 164 47.0
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 9.0e-19 98.2 140 50.7
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.2e-18 97.8 155 43.9
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.2e-18 97.8 173 45.7
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 1.5e-18 97.4 119 52.1
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.5e-18 97.4 160 46.9
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 1.5e-18 97.4 115 53.9
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 2.0e-18 97.1 173 43.4
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 2.6e-18 96.7 123 48.8
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 4.5e-18 95.9 130 48.5
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 4.5e-18 95.9 141 46.8
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 7.6e-18 95.1 107 50.5
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 1.0e-17 94.7 156 42.9
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.0e-17 94.7 119 51.3
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.0e-17 94.7 158 43.7
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.3e-17 94.4 133 48.1
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.3e-17 94.4 142 49.3
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 1.7e-17 94.0 168 44.0
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 2.2e-17 93.6 160 45.6
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 2.9e-17 93.2 114 51.8
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 3.8e-17 92.8 102 53.9
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 3.8e-17 92.8 118 50.8
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.8e-17 92.8 143 47.6
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 4.9e-17 92.4 172 42.4
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 4.9e-17 92.4 170 41.8
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 6.5e-17 92.0 103 51.5
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 6.5e-17 92.0 153 45.1
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.5e-17 92.0 142 45.8
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 6.5e-17 92.0 142 45.8
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 6.5e-17 92.0 139 46.0
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 8.4e-17 91.7 122 48.4
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 8.4e-17 91.7 84 60.7
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 8.4e-17 91.7 115 49.6
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 8.4e-17 91.7 117 49.6
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.1e-16 91.3 141 47.5
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 1.4e-16 90.9 135 44.4
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.4e-16 90.9 111 46.8
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.9e-16 90.5 112 50.0
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 2.5e-16 90.1 108 53.7
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 2.5e-16 90.1 157 47.8
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 3.2e-16 89.7 131 51.1
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 4.2e-16 89.4 187 43.3
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 5.5e-16 89.0 77 62.3
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 5.5e-16 89.0 141 46.8
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 5.5e-16 89.0 129 46.5
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 5.5e-16 89.0 140 47.9
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 5.5e-16 89.0 104 51.0
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 5.5e-16 89.0 128 43.0
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 7.1e-16 88.6 131 50.4
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 7.1e-16 88.6 153 45.1
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 9.3e-16 88.2 137 46.0
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 9.3e-16 88.2 143 46.9
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 9.3e-16 88.2 175 42.3
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 1.2e-15 87.8 104 50.0
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.2e-15 87.8 119 46.2
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 1.2e-15 87.8 153 43.1
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 1.2e-15 87.8 125 48.0
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.6e-15 87.4 92 56.5
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.6e-15 87.4 83 59.0
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 2.1e-15 87.0 140 46.4
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.7e-15 86.7 114 45.6
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.7e-15 86.7 153 41.2
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 2.7e-15 86.7 149 43.0
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.5e-15 86.3 134 43.3
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 4.6e-15 85.9 101 48.5
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 4.6e-15 85.9 171 40.4
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.0e-15 85.5 105 48.6
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 7.9e-15 85.1 122 49.2
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 2.3e-14 83.6 150 41.3
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 5.1e-14 82.4 83 54.2
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 6.7e-14 82.0 94 48.9
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 8.7e-14 81.6 130 43.1
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.5e-13 80.9 106 48.1
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 3.3e-13 79.7 133 44.4
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 5.7e-13 79.0 112 44.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 9.7e-13 78.2 151 44.4
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.6e-12 77.4 95 49.5
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.6e-12 77.4 95 49.5
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 2.2e-12 77.0 95 49.5
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 2.2e-12 77.0 160 40.6
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 2.2e-12 77.0 170 37.1
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 2.2e-12 77.0 166 38.0
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 2.2e-12 77.0 120 42.5
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 2.8e-12 76.6 92 51.1
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 3.1e-11 73.2 149 40.9
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.1e-11 72.8 72 55.6
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 5.3e-11 72.4 88 53.4
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 7.7e-10 68.6 113 40.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.0e-09 68.2 95 45.3
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 1.7e-09 67.4 88 46.6
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 3.8e-09 66.2 114 42.1
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 6.5e-09 65.5 97 44.3
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 8.5e-09 65.1 119 40.3
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 8.5e-09 65.1 83 47.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 1.1e-08 64.7 56 57.1
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.4e-08 64.3 103 44.7
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 7.9e-07 58.5 101 42.6
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 2.3e-06 57.0 127 36.2
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 3.9e-06 56.2 107 39.3
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 3.9e-06 56.2 118 36.4


User provided reference genes

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