Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 3.5e-100 369.0 303 100.0
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.1e-27 125.9 144 55.6
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 1.5e-26 124.4 144 54.9
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.9e-26 124.0 147 55.1
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.5e-23 114.4 147 51.7
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 2.7e-20 103.6 202 37.1
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.3e-19 100.5 120 54.2
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 2.5e-18 97.1 149 41.6
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 2.5e-18 97.1 135 45.9
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 2.2e-17 94.0 136 47.1
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 1.1e-16 91.7 117 48.7
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 9.1e-16 88.6 142 44.4
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 9.1e-16 88.6 140 42.9
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 2.0e-15 87.4 141 39.7
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 2.6e-15 87.0 140 41.4
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 7.7e-15 85.5 95 57.9
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.0e-14 85.1 115 40.9
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.0e-14 85.1 141 41.1
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.9e-14 83.6 115 46.1
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 2.9e-14 83.6 213 37.6
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 2.9e-14 83.6 213 37.6
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 2.9e-14 83.6 141 42.6
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 6.5e-14 82.4 137 46.0
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 6.5e-14 82.4 141 41.8
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 1.9e-13 80.9 98 46.9
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 5.5e-13 79.3 195 34.9
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 7.2e-13 79.0 141 39.0
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 9.4e-13 78.6 145 38.6
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.6e-12 77.8 141 38.3
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.6e-12 77.8 141 38.3
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 4.7e-12 76.3 108 46.3
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 7.9e-12 75.5 109 43.1
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 1.4e-11 74.7 144 41.7
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.8e-11 74.3 140 36.4
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 3.0e-11 73.6 140 40.0
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 3.9e-11 73.2 116 37.9
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 1.1e-10 71.6 141 36.2
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 1.5e-10 71.2 141 36.2
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 2.0e-10 70.9 130 38.5
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 2.0e-10 70.9 135 41.5
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 2.6e-10 70.5 141 37.6
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.3e-10 70.1 103 45.6
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 4.4e-10 69.7 142 43.0
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 4.4e-10 69.7 126 40.5
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 5.7e-10 69.3 140 33.6
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 1.3e-09 68.2 94 43.6
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 2.2e-09 67.4 142 35.2
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 2.8e-09 67.0 104 37.5
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 3.7e-09 66.6 141 42.6
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 4.8e-09 66.2 141 39.7
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 6.3e-09 65.9 132 41.7
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 6.3e-09 65.9 145 38.6
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 8.2e-09 65.5 157 37.6
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 8.2e-09 65.5 139 36.0
CDE04G1723 Ceratophyllum demersum HOM05D050733 ORTHO05D006259 1.1e-08 65.1 133 34.6
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.1e-08 65.1 140 39.3
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 1.8e-08 64.3 133 40.6
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 3.1e-08 63.5 131 38.2
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 3.1e-08 63.5 54 57.4
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 4.1e-08 63.2 116 34.5
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 5.3e-08 62.8 144 34.7
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 7.0e-08 62.4 136 37.5
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 9.1e-08 62.0 101 42.6
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 9.1e-08 62.0 132 38.6
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.2e-07 61.6 116 41.4
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.5e-07 61.2 145 40.0
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.5e-07 61.2 143 37.8
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 2.0e-07 60.8 149 34.2
BolC5t29251H Brassica oleracea HOM05D006785 ORTHO05D006259 2.6e-07 60.5 94 37.2
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.6e-07 60.5 116 40.5
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.4e-07 60.1 116 37.1
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 3.4e-07 60.1 105 39.0
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 3.4e-07 60.1 113 38.1
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 5.9e-07 59.3 101 36.6
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.0e-06 58.5 128 38.3
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 1.0e-06 58.5 55 58.2
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 1.0e-06 58.5 55 58.2
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 1.3e-06 58.2 53 62.3
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.2e-06 57.4 108 39.8
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 2.2e-06 57.4 100 39.0
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 2.2e-06 57.4 117 35.0
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.8e-06 56.6 110 36.4
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 3.8e-06 56.6 118 33.9
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.8e-06 56.6 103 40.8
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 5.0e-06 56.2 138 36.2
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 5.0e-06 56.2 124 37.1
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 6.5e-06 55.8 130 33.8
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 8.5e-06 55.5 130 32.3
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 8.5e-06 55.5 71 49.3


User provided reference genes

Program Settings