Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g41704_MAGBIO Magnolia biondii HOM05D004275 ORTHO05D016645 1.2e-88 329.7 159 100.0
MBI05_g34489_MAGBIO Magnolia biondii HOM05D004275 ORTHO05D016645 3.3e-49 198.7 112 86.6
MBI04_g36080_MAGBIO Magnolia biondii HOM05D004275 ORTHO05D005720 4.3e-49 198.4 111 86.5
MBI02_g09446_MAGBIO Magnolia biondii HOM05D004275 ORTHO05D005720 8.0e-48 194.1 168 61.3
TAR623G0238 Trochodendron aralioides HOM05D004275 ORTHO05D005720 1.8e-47 193.0 168 59.5
TAR633G1954 Trochodendron aralioides HOM05D004275 ORTHO05D005720 2.9e-45 185.7 168 57.1
Dinv22171 Davidia involucrata HOM05D004275 ORTHO05D005720 1.9e-44 183.0 168 57.7
Potri.009G052600 Populus trichocarpa HOM05D004275 ORTHO05D005720 3.2e-44 182.2 168 56.5
vmacro04150 Vaccinium macrocarpon HOM05D004275 ORTHO05D005720 1.2e-43 180.3 168 56.0
COL.COLO4_06119 Corchorus olitorius HOM05D004275 ORTHO05D005720 2.7e-43 179.1 168 56.5
Gohir.A13G216800 Gossypium hirsutum HOM05D004275 ORTHO05D005720 2.7e-43 179.1 168 56.0
Gorai.013G251300 Gossypium raimondii HOM05D004275 ORTHO05D005720 2.7e-43 179.1 168 56.0
Sc16g0011460 Simmondsia chinensis HOM05D004275 ORTHO05D005720 3.5e-43 178.7 168 55.4
FvH4_3g28720 Fragaria vesca HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 56.0
FAN11G3306 Fragaria x ananassa HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 56.0
FAN16G3143 Fragaria x ananassa HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 56.0
FAN21G1743 Fragaria x ananassa HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 56.0
Gohir.D13G220400 Gossypium hirsutum HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 55.4
Sed0004479 Sechium edule HOM05D004275 ORTHO05D005720 6.0e-43 177.9 168 56.5
FAN25G0114 Fragaria x ananassa HOM05D004275 ORTHO05D005720 1.0e-42 177.2 168 56.0
Dinv36252 Davidia involucrata HOM05D004275 ORTHO05D005720 1.3e-42 176.8 168 56.0
QL01p004494 Quercus lobata HOM05D004275 ORTHO05D005720 1.3e-42 176.8 168 55.4
QL01p004587 Quercus lobata HOM05D004275 ORTHO05D005720 1.3e-42 176.8 168 55.4
Sabra09G0038300 Salix brachista HOM05D004275 ORTHO05D005720 1.3e-42 176.8 168 55.4
Sabra16G0155700 Salix brachista HOM05D004275 ORTHO05D005720 1.3e-42 176.8 168 55.4
CiPaw.13G159400 Carya illinoinensis HOM05D004275 ORTHO05D005720 1.7e-42 176.4 168 56.5
Manes.14G003400 Manihot esculenta HOM05D004275 ORTHO05D005720 1.7e-42 176.4 168 53.6
Nn2g15308 Nelumbo nucifera HOM05D004275 ORTHO05D005720 2.3e-42 176.0 157 59.9
CSS0049776 Camellia sinensis var. sinensis HOM05D004275 ORTHO05D005720 3.0e-42 175.6 168 54.8
Potri.001G257000 Populus trichocarpa HOM05D004275 ORTHO05D005720 3.0e-42 175.6 168 54.8
MD03G1173800 Malus domestica HOM05D004275 ORTHO05D005720 3.9e-42 175.3 168 56.0
Thecc.09G235100 Theobroma cacao HOM05D004275 ORTHO05D005720 3.9e-42 175.3 168 56.0
Cpa.g.sc942.3 Carica papaya HOM05D004275 ORTHO05D005720 5.0e-42 174.9 168 54.2
AUR62019311 Chenopodium quinoa HOM05D004275 ORTHO05D005720 5.0e-42 174.9 196 47.4
Rhsim13G0220600 Rhododendron simsii HOM05D004275 ORTHO05D005720 5.0e-42 174.9 168 54.2
TWI60G1329 Tripterygium wilfordii HOM05D004275 ORTHO05D005720 5.0e-42 174.9 196 50.0
Aqoxy1G00279 Aquilegia oxysepala HOM05D004275 ORTHO05D005720 6.6e-42 174.5 168 54.2
Duzib150G0611 Durio zibethinus HOM05D004275 ORTHO05D005720 6.6e-42 174.5 168 54.8
ECA238G2293 Erigeron canadensis HOM05D004275 ORTHO05D005720 6.6e-42 174.5 196 48.0
Hund07501 Selenicereus undatus HOM05D004275 ORTHO05D005720 6.6e-42 174.5 196 48.0
MD11G1192000 Malus domestica HOM05D004275 ORTHO05D005720 1.1e-41 173.7 168 56.0
Prupe.4G250500 Prunus persica HOM05D004275 ORTHO05D005720 1.1e-41 173.7 168 55.4
RcHm_v2.0_Chr5g0052341 Rosa chinensis HOM05D004275 ORTHO05D005720 1.1e-41 173.7 168 55.4
ATR0665G355 Amborella trichopoda HOM05D004275 ORTHO05D005720 1.5e-41 173.3 168 54.2
VMungo1127G0044 Vigna mungo HOM05D004275 ORTHO05D005720 1.5e-41 173.3 168 54.8
Eucgr.B03691 Eucalyptus grandis HOM05D004275 ORTHO05D005720 1.9e-41 172.9 168 53.0
Cc01_g04520 Coffea canephora HOM05D004275 ORTHO05D005720 2.5e-41 172.6 166 54.2
arahy.Tifrunner.gnm1.ann1.J7ITLD Arachis hypogaea HOM05D004275 ORTHO05D005720 4.3e-41 171.8 168 54.8
ClCG03G013190 Citrullus lanatus HOM05D004275 ORTHO05D005720 4.3e-41 171.8 165 55.8
GSVIVG01025246001 Vitis vinifera HOM05D004275 ORTHO05D005720 4.3e-41 171.8 168 54.8
Actinidia16339 Actinidia chinensis HOM05D004275 ORTHO05D005720 5.6e-41 171.4 168 54.2
MELO3C015186.2 Cucumis melo HOM05D004275 ORTHO05D005720 5.6e-41 171.4 168 55.4
CsaV3_1G042860 Cucumis sativus L. HOM05D004275 ORTHO05D005720 5.6e-41 171.4 168 55.4
PSO339G2862 Papaver somniferum HOM05D004275 ORTHO05D005720 5.6e-41 171.4 168 54.2
AUR62000131 Chenopodium quinoa HOM05D004275 ORTHO05D005720 7.3e-41 171.0 196 46.9
Psat7g170960 Pisum sativum HOM05D004275 ORTHO05D005720 7.3e-41 171.0 168 54.8
arahy.Tifrunner.gnm1.ann1.UPB5M5 Arachis hypogaea HOM05D004275 ORTHO05D005720 9.5e-41 170.6 168 54.8
Atru.chr3.2700 Acer truncatum HOM05D004275 ORTHO05D005720 1.2e-40 170.2 169 52.7
Actinidia06913 Actinidia chinensis HOM05D004275 ORTHO05D005720 1.2e-40 170.2 168 54.2
CiPaw.14G118200 Carya illinoinensis HOM05D004275 ORTHO05D005720 1.2e-40 170.2 168 53.6
Ciclev10014382m.g Citrus clementina HOM05D004275 ORTHO05D005720 1.2e-40 170.2 169 54.4
HanXRQChr14g0432921 Helianthus annuus HOM05D004275 ORTHO05D005720 1.2e-40 170.2 196 47.4
Lsat_1_v5_gn_2_29601 Lactuca sativa HOM05D004275 ORTHO05D005720 1.2e-40 170.2 196 46.4
PSO384G3770 Papaver somniferum HOM05D004275 ORTHO05D005720 1.2e-40 170.2 168 54.2
Ah.06g194090 Amaranthus hybridus HOM05D004275 ORTHO05D005720 2.1e-40 169.5 196 46.4
Ca_18964_v3 Cicer arietinum L. HOM05D004275 ORTHO05D005720 2.1e-40 169.5 168 54.2
Glyma.12G019400 Glycine max HOM05D004275 ORTHO05D005720 2.1e-40 169.5 168 54.8
Lj3g0013987 Lotus japonicus HOM05D004275 ORTHO05D005720 2.1e-40 169.5 168 54.8
Phvul.011G021800 Phaseolus vulgaris HOM05D004275 ORTHO05D005720 2.1e-40 169.5 168 54.8
Hund22025 Selenicereus undatus HOM05D004275 ORTHO05D005720 2.1e-40 169.5 168 51.8
Haze_23146 Corylus avellana HOM05D004275 ORTHO05D005720 2.8e-40 169.1 168 53.0
Nitab4.5_0002741g0060 Nicotiana tabacum HOM05D004275 ORTHO05D005720 2.8e-40 169.1 168 52.4
CANSAT54G3046 Cannabis sativa HOM05D004275 ORTHO05D005720 3.6e-40 168.7 168 53.6
Medtr4g077190 Medicago truncatula HOM05D004275 ORTHO05D005720 4.7e-40 168.3 168 54.2
TPR.G13256 Trifolium pratense HOM05D004275 ORTHO05D005720 4.7e-40 168.3 169 53.8
EL10Ac4g10239 Beta vulgaris HOM05D004275 ORTHO05D005720 1.1e-39 167.2 196 45.9
Cfa009782 Carpinus fangiana HOM05D004275 ORTHO05D005720 1.1e-39 167.2 168 52.4
Gohir.D07G127600 Gossypium hirsutum HOM05D004275 ORTHO05D005720 1.4e-39 166.8 169 52.7
Gorai.001G137900 Gossypium raimondii HOM05D004275 ORTHO05D005720 1.4e-39 166.8 169 52.7
Nitab4.5_0004741g0010 Nicotiana tabacum HOM05D004275 ORTHO05D005720 1.4e-39 166.8 168 51.2
Glyma.11G093200 Glycine max HOM05D004275 ORTHO05D005720 1.8e-39 166.4 168 54.2
Psat1g163480 Pisum sativum HOM05D004275 ORTHO05D016645 1.8e-39 166.4 168 53.0
ECA238G3845 Erigeron canadensis HOM05D004275 ORTHO05D016645 2.3e-39 166.0 168 51.8
MSTRG.17596 Avicennia marina HOM05D004275 ORTHO05D005720 4.0e-39 165.2 168 51.8
Peaxi162Scf00004g02625 Petunia axillaris HOM05D004275 ORTHO05D005720 4.0e-39 165.2 168 50.6
HanXRQChr06g0180721 Helianthus annuus HOM05D004275 ORTHO05D005720 1.2e-38 163.7 196 46.4
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 1.5e-38 163.3 196 44.9
Solyc11g065620.2 Solanum lycopersicum HOM05D004275 ORTHO05D005720 2.0e-38 162.9 168 50.0
Sopen11g025340 Solanum pennellii HOM05D004275 ORTHO05D005720 2.6e-38 162.5 168 50.0
Oeu063325.1 Olea europaea HOM05D004275 ORTHO05D005720 5.8e-38 161.4 168 50.6
Lalb_Chr01g0001011 Lupinus albus HOM05D004275 ORTHO05D005720 7.5e-38 161.0 168 52.4
CAN.G1114.4 Capsicum annuum HOM05D004275 ORTHO05D005720 9.8e-38 160.6 168 49.4
Lalb_Chr03g0024461 Lupinus albus HOM05D004275 ORTHO05D005720 9.8e-38 160.6 164 54.3
PGSC0003DMG400010304 Solanum tuberosum HOM05D004275 ORTHO05D005720 1.7e-37 159.8 168 49.4
SalBow6G4070 Salvia bowleyana HOM05D004275 ORTHO05D005720 3.7e-37 158.7 196 45.4
Duzib168G2249 Durio zibethinus HOM05D004275 ORTHO05D005720 6.4e-37 157.9 111 66.7
Oeu015661.2 Olea europaea HOM05D004275 ORTHO05D005720 1.1e-36 157.1 168 51.2
Migut.D00608 Erythranthe guttata HOM05D004275 ORTHO05D005720 1.4e-36 156.8 168 50.0
Lj2C629T12 Lonicera japonica HOM05D004275 ORTHO05D005720 6.0e-35 151.4 168 49.4
SGA_v2.0_scaffold42G16067 Striga asiatica HOM05D004275 ORTHO05D005720 3.0e-34 149.1 194 45.4
THA.LOC104816457 Tarenaya hassleriana HOM05D004275 ORTHO05D005720 3.6e-32 142.1 168 47.0
Psat0s2595g0040 Pisum sativum HOM05D004275 ORTHO05D016645 1.2e-30 137.1 99 67.7
Psat6g054120 Pisum sativum HOM05D004275 ORTHO05D016645 2.0e-30 136.3 91 70.3
Nn7g36235 Nelumbo nucifera HOM05D004275 ORTHO05D005720 4.4e-30 135.2 128 54.7
Gohir.A07G123700 Gossypium hirsutum HOM05D004275 ORTHO05D005720 1.4e-28 130.2 147 47.6
CSS0024262 Camellia sinensis var. sinensis HOM05D004275 ORTHO05D005720 3.9e-26 122.1 152 45.4
SEGI_34448 Sequoiadendron giganteum HOM05D004275 ORTHO05D005720 3.3e-25 119.0 126 50.0
CDE05G0210 Ceratophyllum demersum HOM05D004275 ORTHO05D016645 4.3e-25 118.6 121 51.2
CDE05G0132 Ceratophyllum demersum HOM05D004275 ORTHO05D005720 7.3e-25 117.9 121 50.4
Manes.06G163600 Manihot esculenta HOM05D004275 ORTHO05D005720 4.7e-24 115.2 126 48.4
BcaB04g21202 Brassica carinata HOM05D004275 ORTHO05D005720 1.8e-23 113.2 125 48.0
Carub.0006s0351 Capsella rubella HOM05D004275 ORTHO05D005720 1.8e-23 113.2 128 43.8
BcaNung05804 Brassica carinata HOM05D004275 ORTHO05D005720 3.1e-23 112.5 125 47.2
BolC1t05383H Brassica oleracea HOM05D004275 ORTHO05D005720 3.1e-23 112.5 125 47.2
BraA01t04241Z Brassica rapa HOM05D004275 ORTHO05D005720 3.1e-23 112.5 125 47.2
A01p41670 Brassica napus HOM05D004275 ORTHO05D005720 6.8e-23 111.3 125 47.2
Thhalv10020247m.g Eutrema salsugineum HOM05D004275 ORTHO05D005720 6.8e-23 111.3 128 46.1
Aa31LG3G3410 Aethionema arabicum HOM05D004275 ORTHO05D005720 1.2e-22 110.5 125 46.4
Sp3g08840 Schrenkiella parvula HOM05D004275 ORTHO05D005720 1.2e-22 110.5 125 47.2
BcaB04g18592 Brassica carinata HOM05D004275 ORTHO05D005720 1.5e-22 110.2 125 47.2
A03p36630 Brassica napus HOM05D004275 ORTHO05D005720 1.5e-22 110.2 125 47.2
C03p44270 Brassica napus HOM05D004275 ORTHO05D005720 1.5e-22 110.2 125 47.2
BolC3t16697H Brassica oleracea HOM05D004275 ORTHO05D005720 1.5e-22 110.2 125 47.2
BraA03t12827Z Brassica rapa HOM05D004275 ORTHO05D005720 1.5e-22 110.2 125 47.2
Os05g0503300 Oryza sativa ssp. japonica HOM05D004275 ORTHO05D005720 3.4e-22 109.0 157 41.4
BcaC06g32167 Brassica carinata HOM05D004275 ORTHO05D005720 5.8e-22 108.2 125 44.8
C09p72200 Brassica napus HOM05D004275 ORTHO05D005720 5.8e-22 108.2 125 44.8
BolC9t59964H Brassica oleracea HOM05D004275 ORTHO05D005720 5.8e-22 108.2 125 44.8
CARHR208700 Cardamine hirsuta HOM05D004275 ORTHO05D005720 5.8e-22 108.2 128 42.2
TWI34G1644 Tripterygium wilfordii HOM05D004275 ORTHO05D005720 5.8e-22 108.2 124 47.6
AL6G14220 Arabidopsis lyrata HOM05D004275 ORTHO05D005720 7.6e-22 107.8 128 42.2
Aa31LG11G5460 Aethionema arabicum HOM05D004275 ORTHO05D005720 9.9e-22 107.5 126 43.7
Sp6g38190 Schrenkiella parvula HOM05D004275 ORTHO05D005720 9.9e-22 107.5 125 44.0
AT5G04590 Arabidopsis thaliana HOM05D004275 ORTHO05D005720 1.7e-21 106.7 128 42.2
BraA10t45197Z Brassica rapa HOM05D004275 ORTHO05D005720 1.7e-21 106.7 126 43.7
A10p31510 Brassica napus HOM05D004275 ORTHO05D005720 4.9e-21 105.1 126 43.7
unitig_736.g22918 Utricularia gibba HOM05D004275 ORTHO05D005720 1.4e-20 103.6 129 43.4
Zm00001eb292100 Zea mays HOM05D004275 ORTHO05D005720 1.4e-20 103.6 123 46.3
MBI09_g14590_MAGBIO Magnolia biondii HOM05D004275 ORTHO05D016645 2.7e-19 99.4 74 71.6
MBI09_g47008_MAGBIO Magnolia biondii HOM05D001217 ORTHO05D001097 7.8e-19 97.8 60 83.3
MBI18_g00540_MAGBIO Magnolia biondii HOM05D002696 ORTHO05D011600 7.8e-19 97.8 58 84.5
Lsat_1_v5_gn_2_29581 Lactuca sativa HOM05D004275 ORTHO05D000042 1.3e-18 97.1 165 37.0
Mapoly0149s0024 Marchantia polymorpha HOM05D004275 ORTHO05D005720 5.1e-18 95.1 112 42.0
Pp3c4_1320 Physcomitrium patens HOM05D004275 ORTHO05D005720 8.7e-18 94.4 166 36.1
Pp3c2_17740 Physcomitrium patens HOM05D004275 ORTHO05D005720 1.1e-17 94.0 166 35.5
Pp3c2_17860 Physcomitrium patens HOM05D004275 ORTHO05D005720 1.1e-17 94.0 166 35.5
BcaC01g04172 Brassica carinata HOM05D004275 ORTHO05D005720 4.3e-17 92.0 111 45.9
Pp3c3_22320 Physcomitrium patens HOM05D004275 ORTHO05D005720 5.6e-17 91.7 165 34.5
SMO351G0325 Selaginella moellendorffii HOM05D004275 ORTHO05D005720 4.0e-15 85.5 139 38.8
arahy.Tifrunner.gnm1.ann1.JD8ECX Arachis hypogaea HOM05D004275 ORTHO05D016645 9.9e-14 80.9 95 47.4
Oeu043294.1 Olea europaea HOM05D004275 ORTHO05D005720 1.1e-12 77.4 58 63.8
HPP92_009587 Vanilla planifolia HOM05D004275 ORTHO05D005720 7.9e-11 71.2 87 49.4
Cre16.g693202 Chlamydomonas reinhardtii HOM05D004275 ORTHO05D005720 5.1e-10 68.6 61 50.8
PRCOL_00002318 Prasinoderma coloniale HOM05D004275 ORTHO05D005720 5.1e-10 68.6 109 33.0
Actinidia26797 Actinidia chinensis HOM05D004275 ORTHO05D005720 3.6e-08 62.4 61 52.5
CBR_g23983 Chara braunii HOM05D004275 ORTHO05D005720 6.2e-08 61.6 73 42.5
MCO03G235 Micromonas commoda HOM05D004275 ORTHO05D005720 1.1e-07 60.8 129 28.7


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