Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.2e-52 209.5 102 100.0
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.2e-31 139.8 71 93.0
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 4.0e-16 88.2 73 60.3
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.2e-15 86.7 70 62.9
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.2e-15 86.7 70 65.7
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.2e-15 86.7 73 58.9
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.2e-15 86.7 73 61.6
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 2.0e-15 85.9 78 60.3
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 2.6e-15 85.5 72 58.3
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.6e-15 85.5 90 50.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 2.6e-15 85.5 74 55.4
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 7.5e-15 84.0 89 53.9
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.8e-15 83.6 73 58.9
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 9.8e-15 83.6 74 56.8
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 9.8e-15 83.6 73 56.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.3e-14 83.2 68 61.8
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.3e-14 83.2 68 60.3
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 4.9e-14 81.3 67 61.2
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.1e-13 80.1 73 57.5
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 1.4e-13 79.7 75 53.3
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.4e-13 79.7 73 56.2
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.8e-13 79.3 89 48.3
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.8e-13 79.3 89 48.3
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 3.2e-13 78.6 67 58.2
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 3.2e-13 78.6 77 54.5
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 7.0e-13 77.4 82 53.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 7.0e-13 77.4 77 54.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.2e-13 77.0 89 44.9
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.2e-12 76.6 89 47.2
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.0e-12 75.9 75 57.3
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 2.7e-12 75.5 105 43.8
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.7e-12 75.5 72 56.9
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 4.6e-12 74.7 90 50.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.0e-12 74.3 73 57.5
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 6.0e-12 74.3 73 53.4
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 1.0e-11 73.6 72 55.6
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.3e-11 73.2 76 53.9
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 2.3e-11 72.4 73 53.4
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.0e-11 72.0 47 66.0
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 3.9e-11 71.6 73 54.8
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 3.9e-11 71.6 60 60.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 5.0e-11 71.2 77 51.9
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 6.6e-11 70.9 74 54.1
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.1e-10 70.1 60 58.3
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.1e-10 70.1 60 58.3
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.5e-10 69.7 92 41.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.5e-10 68.9 71 46.5
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.5e-10 68.9 64 56.2
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 3.3e-10 68.6 79 54.4
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 3.3e-10 68.6 79 54.4
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 3.3e-10 68.6 51 66.7
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 4.3e-10 68.2 77 49.4
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 4.3e-10 68.2 77 48.1
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 5.6e-10 67.8 69 52.2
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 7.3e-10 67.4 61 60.7
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 9.5e-10 67.0 80 46.2
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 9.5e-10 67.0 61 60.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.2e-09 66.6 80 46.2
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.2e-09 66.6 80 46.2
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.2e-09 66.6 71 49.3
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.2e-09 66.6 71 54.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.2e-09 66.6 63 54.0
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.2e-09 66.6 71 46.5
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.6e-09 66.2 92 45.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.1e-09 65.9 73 52.1
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.1e-09 65.9 77 49.4
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 2.1e-09 65.9 95 43.2
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 3.6e-09 65.1 61 59.0
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 4.7e-09 64.7 92 44.6
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 4.7e-09 64.7 92 44.6
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 4.7e-09 64.7 92 44.6
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 6.2e-09 64.3 92 44.6
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 6.2e-09 64.3 67 52.2
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 6.2e-09 64.3 67 50.7
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.0e-09 63.9 95 42.1
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 8.0e-09 63.9 96 42.7
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.1e-08 63.5 54 57.4
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.1e-08 62.0 68 45.6
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 5.2e-08 61.2 69 50.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 8.9e-08 60.5 66 48.5
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 2.6e-07 58.9 43 62.8
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.4e-07 58.5 48 64.6
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.3e-06 56.6 45 55.6
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.3e-06 56.6 45 57.8
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.3e-06 56.6 59 52.5
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 2.9e-06 55.5 76 42.1
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.7e-06 55.1 75 46.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 4.9e-06 54.7 60 48.3
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 6.4e-06 54.3 83 43.4
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.4e-06 54.3 59 49.2


User provided reference genes

Program Settings