Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.2e-143 513.1 251 100.0
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.6e-135 486.1 251 95.6
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 3.5e-66 255.8 222 58.6
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 8.2e-55 218.0 220 51.8
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 3.0e-49 199.5 221 47.1
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.0e-48 196.8 228 45.6
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 5.7e-48 195.3 219 45.2
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.7e-47 193.7 228 47.8
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.8e-46 190.3 216 48.1
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 9.1e-46 188.0 222 42.3
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 9.1e-46 188.0 217 47.9
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.0e-45 186.8 214 46.3
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.9e-44 183.0 197 49.7
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 8.5e-44 181.4 221 45.7
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.1e-43 181.0 219 41.1
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.9e-43 180.3 238 42.0
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.5e-43 179.9 219 43.4
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 5.5e-43 178.7 219 43.4
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.5e-43 178.7 221 43.9
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.1e-42 176.8 220 42.7
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 4.7e-42 175.6 219 42.5
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.1e-42 175.3 218 45.4
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.0e-42 174.9 216 45.8
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.4e-41 174.1 219 44.3
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.8e-39 166.4 216 44.4
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 4.8e-39 165.6 216 43.5
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 8.2e-39 164.9 222 44.1
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.6e-37 160.6 222 43.2
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 3.5e-37 159.5 254 38.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 5.9e-37 158.7 173 46.8
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.0e-36 157.9 218 41.7
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.2e-34 151.0 167 45.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 6.1e-34 148.7 203 41.9
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.7e-32 142.1 159 45.3
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.7e-31 140.6 159 44.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 3.7e-31 139.4 217 40.1
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.7e-31 139.4 166 47.0
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.1e-30 137.9 167 47.9
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.1e-30 137.9 167 47.9
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 2.4e-30 136.7 218 37.6
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 1.2e-29 134.4 178 44.4
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 5.0e-28 129.0 222 37.8
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 5.0e-28 129.0 222 37.8
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 8.5e-28 128.3 165 48.5
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.1e-27 127.9 163 47.9
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.1e-27 127.9 218 36.2
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 9.4e-27 124.8 167 43.1
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.2e-26 124.4 115 52.2
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 1.6e-26 124.0 230 37.4
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.3e-25 120.2 170 41.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.2e-24 117.9 163 42.3
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.6e-24 116.7 116 47.4
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 5.7e-24 115.5 189 34.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.2e-23 113.6 164 38.4
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.8e-22 110.5 173 39.3
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 2.4e-22 110.2 155 40.6
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 5.9e-21 105.5 111 46.8
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 5.9e-21 105.5 115 43.5
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.2e-18 97.8 166 40.4
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 8.0e-18 95.1 176 38.1
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.1e-14 84.7 208 29.8
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 2.4e-14 83.6 168 36.9
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.3e-12 77.8 112 36.6
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 8.6e-12 75.1 103 40.8
Pp3c3_2330 Physcomitrium patens HOM05D008092 ORTHO05D010277 6.2e-10 68.9 109 35.8
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 5.2e-09 65.9 116 37.1
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 4.4e-08 62.8 65 47.7
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 2.2e-07 60.5 41 63.4


User provided reference genes

Program Settings