Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 1.1e-242 842.8 419 100.0
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 7.9e-111 404.8 297 71.7
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 9.7e-109 397.9 246 79.3
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 2.2e-108 396.7 288 72.9
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 2.8e-108 396.4 246 80.5
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 3.1e-107 392.9 279 71.3
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 9.0e-107 391.3 246 79.3
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 5.9e-106 388.7 249 77.1
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 2.9e-105 386.3 245 78.8
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 1.4e-104 384.0 248 76.6
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 1.4e-104 384.0 246 77.6
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 1.9e-104 383.6 247 77.7
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 3.2e-104 382.9 252 76.6
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 4.2e-104 382.5 247 76.5
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 5.5e-104 382.1 247 76.5
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 5.5e-104 382.1 248 76.2
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 7.2e-104 381.7 263 74.5
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 1.2e-103 380.9 293 68.3
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 2.7e-103 379.8 249 76.7
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 6.1e-103 378.6 264 73.9
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 1.0e-102 377.9 283 69.6
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 1.0e-102 377.9 248 75.4
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 2.3e-102 376.7 280 67.9
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 2.3e-102 376.7 264 72.3
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 3.0e-102 376.3 282 68.8
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 3.9e-102 375.9 280 67.9
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 6.7e-102 375.2 264 72.3
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 8.7e-102 374.8 264 72.0
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 8.7e-102 374.8 268 71.6
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 4.3e-101 372.5 252 74.6
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 4.3e-101 372.5 298 66.4
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 4.3e-101 372.5 250 74.0
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 5.7e-101 372.1 302 65.6
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 7.4e-101 371.7 302 65.6
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 9.7e-101 371.3 248 71.4
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 9.7e-101 371.3 247 75.3
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 2.8e-100 369.8 227 79.3
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 4.8e-100 369.0 254 72.8
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 4.1e-99 365.9 247 74.1
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 5.3e-99 365.5 284 68.0
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 1.2e-98 364.4 230 78.7
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 1.2e-98 364.4 225 78.7
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 2.0e-98 363.6 230 78.3
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 2.6e-98 363.2 246 73.2
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 2.6e-98 363.2 298 66.4
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 3.4e-98 362.8 248 72.6
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 3.4e-98 362.8 247 72.9
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 4.5e-98 362.5 261 70.5
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 7.7e-98 361.7 257 71.2
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 7.7e-98 361.7 246 70.7
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 1.0e-97 361.3 221 78.3
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 1.0e-97 361.3 247 72.9
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 1.3e-97 360.9 284 64.4
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 1.7e-97 360.5 250 69.6
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 2.2e-97 360.1 250 71.2
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 2.9e-97 359.8 231 77.5
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 2.9e-97 359.8 277 67.9
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 3.8e-97 359.4 248 71.8
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 5.0e-97 359.0 227 78.0
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 8.5e-97 358.2 274 64.6
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 1.1e-96 357.8 231 77.9
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 1.1e-96 357.8 289 64.0
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 1.9e-96 357.1 274 64.2
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 2.5e-96 356.7 246 68.7
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 3.2e-96 356.3 231 77.5
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 3.2e-96 356.3 289 65.1
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 5.5e-96 355.5 308 59.7
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 1.2e-95 354.4 293 64.8
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 1.2e-95 354.4 300 63.0
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 1.2e-95 354.4 269 68.4
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 1.6e-95 354.0 245 72.2
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 2.1e-95 353.6 258 69.4
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 4.7e-95 352.4 252 71.0
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 7.9e-95 351.7 243 72.4
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 1.8e-94 350.5 247 68.4
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 1.8e-94 350.5 284 64.1
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 1.8e-94 350.5 228 75.0
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 2.3e-94 350.1 225 74.7
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 2.3e-94 350.1 280 66.1
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 2.3e-94 350.1 243 71.6
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 3.0e-94 349.7 280 63.2
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 3.9e-94 349.4 281 63.0
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 5.1e-94 349.0 248 69.8
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 8.8e-94 348.2 270 66.7
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 2.0e-93 347.1 290 64.1
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 2.8e-92 343.2 261 66.3
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 6.3e-92 342.0 288 63.5
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 2.4e-91 340.1 280 61.8
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 2.6e-90 336.7 303 59.7
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 3.2e-88 329.7 280 61.8
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 3.0e-86 323.2 260 62.3
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 9.7e-85 318.2 274 62.4
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 1.4e-83 314.3 208 72.6
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 1.2e-82 311.2 267 60.7
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 2.0e-82 310.5 238 67.6
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 2.6e-82 310.1 239 67.8
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 3.5e-82 309.7 263 59.7
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 1.0e-81 308.1 249 63.5
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 1.7e-81 307.4 222 66.2
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 2.5e-80 303.5 218 70.2
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 2.5e-80 303.5 203 74.9
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 4.7e-79 299.3 226 68.6
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 2.4e-75 287.0 247 58.3
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 2.5e-72 276.9 230 60.4
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 9.4e-72 275.0 206 68.0
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 1.5e-69 267.7 168 76.8
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 2.8e-68 263.5 246 58.1
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 2.6e-61 240.4 139 79.9
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 4.7e-47 193.0 223 47.5
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 6.8e-46 189.1 148 65.5
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 8.9e-46 188.7 216 46.8
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 3.6e-39 166.8 214 42.5
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 4.1e-35 153.3 148 56.8
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 4.7e-31 139.8 85 77.6
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 2.4e-27 127.5 137 50.4
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 2.4e-22 110.9 83 61.4
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 1.1e-19 102.1 56 87.5
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 2.4e-19 100.9 68 66.2
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 3.5e-18 97.1 61 73.8
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 5.1e-17 93.2 110 49.1
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 5.6e-16 89.7 167 32.9
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 7.3e-16 89.4 53 79.2
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 1.3e-15 88.6 63 63.5
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 6.2e-15 86.3 171 36.3
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 1.2e-13 82.0 62 64.5
CDE06G1299 Ceratophyllum demersum HOM05D005950 ORTHO05D130736 1.2e-13 82.0 67 64.2
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 3.4e-13 80.5 51 74.5
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 2.9e-12 77.4 46 76.1
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 4.9e-12 76.6 49 73.5
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 3.2e-11 73.9 175 31.4
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 5.4e-11 73.2 53 66.0
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 1.9e-08 64.7 43 65.1
AL4G33820 Arabidopsis lyrata HOM05D005950 ORTHO05D080589 3.7e-07 60.5 83 41.0


User provided reference genes

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