Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g27410_MAGBIO Magnolia biondii HOM05D008209 ORTHO05D010322 6.7e-96 354.0 175 100.0
MBI10_g27407_MAGBIO Magnolia biondii HOM05D008209 ORTHO05D010322 4.4e-63 245.0 182 72.5
TAR627G0969 Trochodendron aralioides HOM05D008209 ORTHO05D010322 2.6e-31 139.4 174 50.0
Aqoxy1G01751 Aquilegia oxysepala HOM05D000122 ORTHO05D000139 2.1e-17 93.2 204 33.3
Haze_13524 Corylus avellana HOM05D008209 ORTHO05D010322 4.4e-15 85.5 175 40.6
Cfa023068 Carpinus fangiana HOM05D008209 ORTHO05D010322 2.2e-14 83.2 163 39.3
MBI10_g21119_MAGBIO Magnolia biondii HOM05D008209 ORTHO05D010322 2.9e-14 82.8 126 42.9
FAN05G2201 Fragaria x ananassa HOM05D008209 ORTHO05D010322 2.7e-12 76.3 184 31.0
FAN09G0454 Fragaria x ananassa HOM05D008209 ORTHO05D010322 6.0e-12 75.1 175 32.0
Potri.005G204000 Populus trichocarpa HOM05D008209 ORTHO05D010322 6.0e-12 75.1 75 54.7
RcHm_v2.0_Chr2g0151791 Rosa chinensis HOM05D008209 ORTHO05D010322 6.0e-12 75.1 182 33.0
Glyma.18G108600 Glycine max HOM05D008209 ORTHO05D010322 7.8e-12 74.7 181 38.7
QL08p044847 Quercus lobata HOM05D008209 ORTHO05D010322 7.8e-12 74.7 167 35.3
Haze_13528 Corylus avellana HOM05D008209 ORTHO05D010322 1.0e-11 74.3 174 36.8
FAN05G4068 Fragaria x ananassa HOM05D008209 ORTHO05D010322 1.7e-11 73.6 172 32.6
FvH4_6g38710 Fragaria vesca HOM05D008209 ORTHO05D010322 2.3e-11 73.2 161 34.8
Dinv23160 Davidia involucrata HOM05D008209 ORTHO05D010322 3.0e-11 72.8 173 36.4
FAN02G1260 Fragaria x ananassa HOM05D008209 ORTHO05D010322 3.0e-11 72.8 184 32.1
FAN14G5261 Fragaria x ananassa HOM05D008209 ORTHO05D010322 3.0e-11 72.8 190 31.1
FAN14G5452 Fragaria x ananassa HOM05D008209 ORTHO05D010322 5.1e-11 72.0 185 31.9
Lj6g0005626 Lotus japonicus HOM05D008209 ORTHO05D010322 5.6e-10 68.6 179 33.0
Prupe.3G175400 Prunus persica HOM05D008209 ORTHO05D010322 1.6e-09 67.0 191 31.9
ATR0585G051 Amborella trichopoda HOM05D008209 ORTHO05D010322 2.1e-09 66.6 147 32.7
VMungo0540G0857 Vigna mungo HOM05D008209 ORTHO05D010322 2.1e-09 66.6 83 50.6
Phvul.006G031500 Phaseolus vulgaris HOM05D008209 ORTHO05D010322 2.8e-09 66.2 153 33.3
CiPaw.04G138900 Carya illinoinensis HOM05D008209 ORTHO05D010322 3.6e-09 65.9 159 34.0
FAN09G4396 Fragaria x ananassa HOM05D008209 ORTHO05D010322 3.6e-09 65.9 188 31.9
Manes.18G070800 Manihot esculenta HOM05D008209 ORTHO05D010322 4.7e-09 65.5 188 29.3
Actinidia12540 Actinidia chinensis HOM05D008209 ORTHO05D010322 6.2e-09 65.1 183 31.1
Manes.16G083700 Manihot esculenta HOM05D008209 ORTHO05D010322 6.2e-09 65.1 174 32.8
Ciclev10033421m.g Citrus clementina HOM05D008209 ORTHO05D010322 8.1e-09 64.7 180 32.8
FvH4_6g38531 Fragaria vesca HOM05D008209 ORTHO05D010322 1.8e-08 63.5 156 32.1
Oeu020051.1 Olea europaea HOM05D008209 ORTHO05D010322 1.8e-08 63.5 181 33.7
Glyma.08G308400 Glycine max HOM05D008209 ORTHO05D010322 2.4e-08 63.2 161 32.3
Oeu020933.1 Olea europaea HOM05D008209 ORTHO05D010322 2.4e-08 63.2 168 33.9
Oeu033980.1 Olea europaea HOM05D008209 ORTHO05D010322 5.2e-08 62.0 80 48.8
Psat5g194280 Pisum sativum HOM05D008209 ORTHO05D010322 8.9e-08 61.2 169 34.9
Thecc.01G170600 Theobroma cacao HOM05D008209 ORTHO05D010322 1.5e-07 60.5 84 44.0
Potri.002G058200 Populus trichocarpa HOM05D008209 ORTHO05D010322 2.0e-07 60.1 87 47.1
COL.COLO4_21581 Corchorus olitorius HOM05D008209 ORTHO05D010322 2.6e-07 59.7 197 26.4
arahy.Tifrunner.gnm1.ann1.DAB1EQ Arachis hypogaea HOM05D008209 ORTHO05D010322 9.9e-07 57.8 153 31.4
arahy.Tifrunner.gnm1.ann1.NTPN0G Arachis hypogaea HOM05D008209 ORTHO05D010322 1.3e-06 57.4 156 31.4
Ciclev10033296m.g Citrus clementina HOM05D008209 ORTHO05D010322 1.7e-06 57.0 38 71.1
Gohir.D11G163700 Gossypium hirsutum HOM05D008209 ORTHO05D010322 2.2e-06 56.6 141 36.2
Gorai.007G174400 Gossypium raimondii HOM05D008209 ORTHO05D010322 3.8e-06 55.8 141 36.9
PGSC0003DMG400046939 Solanum tuberosum HOM05D008209 ORTHO05D010322 6.4e-06 55.1 171 28.1
Actinidia26767 Actinidia chinensis HOM05D008209 ORTHO05D010322 8.4e-06 54.7 134 33.6


User provided reference genes

Program Settings